RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 SLC34A1Q06495 639 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 KLC1Q07866 573 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 ASPHQ12797 758 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 ABRQ12979 859 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 PRKG2Q13237 762 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 BLMHQ13867 455 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 DSG2Q14126 1118 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 ZXDCQ2QGD7 858 aaPredicted RBP5.08□□□□□ -1.6
SHMT1-211ENST00000618902 AMZ1Q400G9 498 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 CCDC153Q494R4 210 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 TAF1BQ53T94 588 aaPredicted RBP5.08□□□□□ -1.6
SHMT1-211ENST00000618902 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.08□□□□□ -1.6
SHMT1-211ENST00000618902 DCAF12Q5T6F0 453 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 IRGCQ6NXR0 463 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 PAQR3Q6TCH7 311 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 USP53Q70EK8 1073 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 PIWIL4Q7Z3Z4 852 aaKnown RBP5.08□□□□□ -1.6
SHMT1-211ENST00000618902 PRSS42Q7Z5A4 293 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 ARHGAP22Q7Z5H3 698 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 NET1Q7Z628 596 aaPredicted RBP5.08□□□□□ -1.6
SHMT1-211ENST00000618902 MTDHQ86UE4 582 aaKnown RBP5.08□□□□□ -1.6
SHMT1-211ENST00000618902 NUDCD3Q8IVD9 361 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 CPNE9Q8IYJ1 553 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 ZBTB2Q8N680 514 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 PPM1NQ8N819 430 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 GPATCH11Q8N954 259 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 FAM13CQ8NE31 585 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 ARMC2Q8NEN0 867 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 FLVCR1-AS1Q8TAF5 88 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 CALML6Q8TD86 181 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 PPP4R1Q8TF05 950 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 ANKRD49Q8WVL7 239 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 KCNE4Q8WWG9 221 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 ASZ1Q8WWH4 475 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 TFGQ92734 400 aaPredicted RBP5.08□□□□□ -1.6
SHMT1-211ENST00000618902 KCNJ9Q92806 393 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 NACC2Q96BF6 587 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 SLC22A18Q96BI1 424 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 SLC7A6OSQ96CW6 309 aaPredicted RBP5.08□□□□□ -1.6
SHMT1-211ENST00000618902 CXorf40BQ96DE9 158 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 CMTM5Q96DZ9 223 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 MRRFQ96E11 262 aaKnown RBP5.08□□□□□ -1.6
SHMT1-211ENST00000618902 VPS39Q96JC1 886 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 C12orf66Q96MD2 445 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 CATSPER2Q96P56 530 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 IL17FQ96PD4 163 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 UBL7Q96S82 380 aaPredicted RBP5.08□□□□□ -1.6
SHMT1-211ENST00000618902 C17orf62Q9BQA9 187 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 DPH2Q9BQC3 489 aaPredicted RBP5.08□□□□□ -1.6
SHMT1-211ENST00000618902 HGH1Q9BTY7 390 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 FAM192AQ9GZU8 254 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 RHOJQ9H4E5 214 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 TFB2MQ9H5Q4 396 aaKnown RBP5.08□□□□□ -1.6
SHMT1-211ENST00000618902 XKR8Q9H6D3 395 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 MVB12BQ9H7P6 319 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 CAB39LQ9H9S4 337 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 RDH14Q9HBH5 336 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 IMP3Q9NV31 184 aaKnown RBP5.08□□□□□ -1.6
SHMT1-211ENST00000618902 NDE1Q9NXR1 346 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 ZFATQ9P243 1243 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 HEY2Q9UBP5 337 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 ICKQ9UPZ9 632 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 LRCH1Q9Y2L9 728 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 PCDHB1Q9Y5F3 818 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 COMMD10Q9Y6G5 202 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 LRRK2Q5S007 2527 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 HEATR5BQ9P2D3 2071 aa5.08□□□□□ -1.6
SHMT1-211ENST00000618902 IGHV5-10-1A0A0J9YXX1 117 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 FAM95CA0A1B0GW59 222 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 A0A1W2PPM1 405 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 MAGEA13PA6NCF6 341 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 A6NHS1 94 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 ARHGEF33A8MVX0 844 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 FOXO6A8MYZ6 492 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 AGRPO00253 132 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 EIF3FO00303 357 aaPredicted RBP5.07□□□□□ -1.6
SHMT1-211ENST00000618902 BTN3A3O00478 584 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 PHGDHO43175 533 aaKnown RBP5.07□□□□□ -1.6
SHMT1-211ENST00000618902 PRAMEF10O60809 474 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 DIAPH2O60879 1101 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 GLRA3O75311 464 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 SPAG7O75391 227 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 CIB2O75838 187 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 TNFSF15O95150 251 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 MATN4O95460 622 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 C1orf105O95561 183 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 MPOP05164 745 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 TYRP1P17643 537 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 CHRM3P20309 590 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 CD9P21926 228 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 HSD17B2P37059 387 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 GP5P40197 560 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 CAPZBP47756 277 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 FOXK1P85037 733 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 MC2RQ01718 297 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 ACY1Q03154 408 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 TLE3Q04726 772 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 ABHD18Q0P651 414 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 DLG1Q12959 904 aa5.07□□□□□ -1.6
SHMT1-211ENST00000618902 PRKAA1Q13131 559 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms