RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 NEIL2Q969S2 332 aa15.02■□□□□ -0
PCDHGC3-204ENST00000617222 ZUFSPQ96AP4 578 aa15.02■□□□□ -0
PCDHGC3-204ENST00000617222 PRAP1Q96NZ9 151 aa15.02■□□□□ -0
PCDHGC3-204ENST00000617222 NSUN5Q96P11 429 aaKnown RBP15.02■□□□□ -0
PCDHGC3-204ENST00000617222 TMEM237Q96Q45 408 aa15.02■□□□□ -0
PCDHGC3-204ENST00000617222 PAIP2Q9BPZ3 127 aaKnown RBP15.02■□□□□ -0
PCDHGC3-204ENST00000617222 MECRQ9BV79 373 aa15.02■□□□□ -0
PCDHGC3-204ENST00000617222 ERVK-6Q9BXR3 956 aa15.02■□□□□ -0
PCDHGC3-204ENST00000617222 CAPS2Q9BXY5 557 aa15.02■□□□□ -0
PCDHGC3-204ENST00000617222 STRADBQ9C0K7 418 aa15.02■□□□□ -0
PCDHGC3-204ENST00000617222 ZNF768Q9H5H4 540 aaKnown RBP15.02■□□□□ -0
PCDHGC3-204ENST00000617222 MLXIPLQ9NP71 852 aa15.02■□□□□ -0
PCDHGC3-204ENST00000617222 TMEM184CQ9NVA4 438 aa15.02■□□□□ -0
PCDHGC3-204ENST00000617222 SOHLH2Q9NX45 425 aa15.02■□□□□ -0
PCDHGC3-204ENST00000617222 NKIRAS1Q9NYS0 192 aa15.02■□□□□ -0
PCDHGC3-204ENST00000617222 SNX7Q9UNH6 387 aa15.02■□□□□ -0
PCDHGC3-204ENST00000617222 WDR91A4D1P6 747 aa15.01□□□□□ -0.01
PCDHGC3-204ENST00000617222 E2F3O00716 465 aa15.01□□□□□ -0.01
PCDHGC3-204ENST00000617222 CLGNO14967 610 aa15.01□□□□□ -0.01
PCDHGC3-204ENST00000617222 TRIM13O60858 407 aa15.01□□□□□ -0.01
PCDHGC3-204ENST00000617222 SUPT7LO94864 414 aa15.01□□□□□ -0.01
PCDHGC3-204ENST00000617222 BPGMP07738 259 aa15.01□□□□□ -0.01
PCDHGC3-204ENST00000617222 RPS17P08708 135 aaKnown RBP15.01□□□□□ -0.01
PCDHGC3-204ENST00000617222 EPB42P16452 691 aa15.01□□□□□ -0.01
PCDHGC3-204ENST00000617222 NELFEP18615 380 aaKnown RBP15.01□□□□□ -0.01
PCDHGC3-204ENST00000617222 EPORP19235 508 aa15.01□□□□□ -0.01
PCDHGC3-204ENST00000617222 CSTF2P33240 577 aaKnown RBP eCLIP15.01□□□□□ -0.01
PCDHGC3-204ENST00000617222 SERPINB4P48594 390 aa15.01□□□□□ -0.01
PCDHGC3-204ENST00000617222 SLC18A1P54219 525 aa15.01□□□□□ -0.01
PCDHGC3-204ENST00000617222 NAGLUP54802 743 aa15.01□□□□□ -0.01
PCDHGC3-204ENST00000617222 CDH13P55290 713 aa15.01□□□□□ -0.01
PCDHGC3-204ENST00000617222 DNAJB13P59910 316 aa15.01□□□□□ -0.01
PCDHGC3-204ENST00000617222 HSD11B2P80365 405 aa15.01□□□□□ -0.01
PCDHGC3-204ENST00000617222 HSP90B2PQ58FF3 399 aa15.01□□□□□ -0.01
PCDHGC3-204ENST00000617222 HHATQ5VTY9 493 aa15.01□□□□□ -0.01
PCDHGC3-204ENST00000617222 METTL2BQ6P1Q9 378 aaKnown RBP15.01□□□□□ -0.01
PCDHGC3-204ENST00000617222 NXPE4Q6UWF7 544 aa15.01□□□□□ -0.01
PCDHGC3-204ENST00000617222 GOLGA7Q7Z5G4 137 aa15.01□□□□□ -0.01
PCDHGC3-204ENST00000617222 KMT5CQ86Y97 462 aa15.01□□□□□ -0.01
PCDHGC3-204ENST00000617222 CACTIN-AS1Q8N1I8 211 aa15.01□□□□□ -0.01
PCDHGC3-204ENST00000617222 C19orf47Q8N9M1 422 aaKnown RBP15.01□□□□□ -0.01
PCDHGC3-204ENST00000617222 L3HYPDHQ96EM0 354 aa15.01□□□□□ -0.01
PCDHGC3-204ENST00000617222 TCTN2Q96GX1 697 aa15.01□□□□□ -0.01
PCDHGC3-204ENST00000617222 SLC41A2Q96JW4 573 aa15.01□□□□□ -0.01
PCDHGC3-204ENST00000617222 PLCD4Q9BRC7 762 aa15.01□□□□□ -0.01
PCDHGC3-204ENST00000617222 C1QTNF3Q9BXJ4 246 aa15.01□□□□□ -0.01
PCDHGC3-204ENST00000617222 FAM60AQ9NP50 221 aa15.01□□□□□ -0.01
PCDHGC3-204ENST00000617222 PDE7BQ9NP56 450 aa15.01□□□□□ -0.01
PCDHGC3-204ENST00000617222 GPRC5BQ9NZH0 403 aa15.01□□□□□ -0.01
PCDHGC3-204ENST00000617222 PCTPQ9UKL6 214 aa15.01□□□□□ -0.01
PCDHGC3-204ENST00000617222 KLK4Q9Y5K2 254 aa15.01□□□□□ -0.01
PCDHGC3-204ENST00000617222 E7EQ34 232 aa15□□□□□ -0.01
PCDHGC3-204ENST00000617222 MAP3K7O43318 606 aa15□□□□□ -0.01
PCDHGC3-204ENST00000617222 NRP2O60462 931 aa15□□□□□ -0.01
PCDHGC3-204ENST00000617222 PRAMEF4O60810 478 aa15□□□□□ -0.01
PCDHGC3-204ENST00000617222 DHRS4L1P0CG22 281 aa15□□□□□ -0.01
PCDHGC3-204ENST00000617222 C1GALT1C1LP0DN25 315 aa15□□□□□ -0.01
PCDHGC3-204ENST00000617222 TSPAN8P19075 237 aa15□□□□□ -0.01
PCDHGC3-204ENST00000617222 GNAZP19086 355 aa15□□□□□ -0.01
PCDHGC3-204ENST00000617222 HRH2P25021 359 aa15□□□□□ -0.01
PCDHGC3-204ENST00000617222 VARSP26640 1264 aaKnown RBP15□□□□□ -0.01
PCDHGC3-204ENST00000617222 CCR8P51685 355 aa15□□□□□ -0.01
PCDHGC3-204ENST00000617222 WDR4P57081 412 aaKnown RBP15□□□□□ -0.01
PCDHGC3-204ENST00000617222 CSNK1G2P78368 415 aa15□□□□□ -0.01
PCDHGC3-204ENST00000617222 GPS2Q13227 327 aa15□□□□□ -0.01
PCDHGC3-204ENST00000617222 KCNAB1Q14722 419 aa15□□□□□ -0.01
PCDHGC3-204ENST00000617222 NAA25Q14CX7 972 aa15□□□□□ -0.01
PCDHGC3-204ENST00000617222 PRAMEF9Q5VWM5 478 aa15□□□□□ -0.01
PCDHGC3-204ENST00000617222 LIPMQ5VYY2 423 aa15□□□□□ -0.01
PCDHGC3-204ENST00000617222 ZNF425Q6IV72 752 aa15□□□□□ -0.01
PCDHGC3-204ENST00000617222 FBXO42Q6P3S6 717 aa15□□□□□ -0.01
PCDHGC3-204ENST00000617222 SLCO4C1Q6ZQN7 724 aa15□□□□□ -0.01
PCDHGC3-204ENST00000617222 TMPRSS7Q7RTY8 843 aa15□□□□□ -0.01
PCDHGC3-204ENST00000617222 TMPRSS11BQ86T26 416 aa15□□□□□ -0.01
PCDHGC3-204ENST00000617222 PAQR7Q86WK9 346 aa15□□□□□ -0.01
PCDHGC3-204ENST00000617222 NUDCD3Q8IVD9 361 aa15□□□□□ -0.01
PCDHGC3-204ENST00000617222 GALNT15Q8N3T1 639 aa15□□□□□ -0.01
PCDHGC3-204ENST00000617222 D2HGDHQ8N465 521 aa15□□□□□ -0.01
PCDHGC3-204ENST00000617222 AGBL5Q8NDL9 886 aa15□□□□□ -0.01
PCDHGC3-204ENST00000617222 ABHD11Q8NFV4 315 aa15□□□□□ -0.01
PCDHGC3-204ENST00000617222 MDM1Q8TC05 714 aa15□□□□□ -0.01
PCDHGC3-204ENST00000617222 ZNF483Q8TF39 744 aaPredicted RBP15□□□□□ -0.01
PCDHGC3-204ENST00000617222 ATP6V1E2Q96A05 226 aa15□□□□□ -0.01
PCDHGC3-204ENST00000617222 GATA5Q9BWX5 397 aaPredicted RBP15□□□□□ -0.01
PCDHGC3-204ENST00000617222 NOL11Q9H8H0 719 aaKnown RBP15□□□□□ -0.01
PCDHGC3-204ENST00000617222 IPPKQ9H8X2 491 aa15□□□□□ -0.01
PCDHGC3-204ENST00000617222 SEMA4BQ9NPR2 832 aaPredicted RBP15□□□□□ -0.01
PCDHGC3-204ENST00000617222 AKAP7Q9P0M2 348 aaPredicted RBP15□□□□□ -0.01
PCDHGC3-204ENST00000617222 ANKMY1Q9P2S6 941 aa15□□□□□ -0.01
PCDHGC3-204ENST00000617222 BTRCQ9Y297 605 aa15□□□□□ -0.01
PCDHGC3-204ENST00000617222 OR2A25A4D2G3 310 aa14.99□□□□□ -0.01
PCDHGC3-204ENST00000617222 EFCAB7A8K855 629 aa14.99□□□□□ -0.01
PCDHGC3-204ENST00000617222 HGSO14964 777 aaPredicted RBP14.99□□□□□ -0.01
PCDHGC3-204ENST00000617222 H2AFYO75367 372 aaKnown RBP14.99□□□□□ -0.01
PCDHGC3-204ENST00000617222 KATNA1O75449 491 aa14.99□□□□□ -0.01
PCDHGC3-204ENST00000617222 EBLN1P0CF75 366 aa14.99□□□□□ -0.01
PCDHGC3-204ENST00000617222 FOLR1P15328 257 aa14.99□□□□□ -0.01
PCDHGC3-204ENST00000617222 MLLT3P42568 568 aaPredicted RBP14.99□□□□□ -0.01
PCDHGC3-204ENST00000617222 PIK3CGP48736 1102 aa14.99□□□□□ -0.01
PCDHGC3-204ENST00000617222 PPP2R2AP63151 447 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms