RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 C1GALT1Q9NS00 363 aa16.93■□□□□ 0.3
TRAPPC3-209ENST00000616395 RAD18Q9NS91 495 aa16.93■□□□□ 0.3
TRAPPC3-209ENST00000616395 C20orf96Q9NUD7 363 aaPredicted RBP16.93■□□□□ 0.3
TRAPPC3-209ENST00000616395 INTS9Q9NV88 658 aaKnown RBP16.93■□□□□ 0.3
TRAPPC3-209ENST00000616395 HACD3Q9P035 362 aa16.93■□□□□ 0.3
TRAPPC3-209ENST00000616395 TCAF1Q9Y4C2 921 aa16.93■□□□□ 0.3
TRAPPC3-209ENST00000616395 FBN3Q75N90 2809 aa16.92■□□□□ 0.3
TRAPPC3-209ENST00000616395 E7EQ34 232 aa16.92■□□□□ 0.3
TRAPPC3-209ENST00000616395 PFDN6O15212 129 aa16.92■□□□□ 0.3
TRAPPC3-209ENST00000616395 KCNJ13O60928 360 aa16.92■□□□□ 0.3
TRAPPC3-209ENST00000616395 POP7O75817 140 aaKnown RBP16.92■□□□□ 0.3
TRAPPC3-209ENST00000616395 MSL3P1P0C860 447 aa16.92■□□□□ 0.3
TRAPPC3-209ENST00000616395 CBSLP0DN79 551 aa16.92■□□□□ 0.3
TRAPPC3-209ENST00000616395 TPH1P17752 444 aa16.92■□□□□ 0.3
TRAPPC3-209ENST00000616395 SPRP35270 261 aaPredicted RBP16.92■□□□□ 0.3
TRAPPC3-209ENST00000616395 CBSP35520 551 aa16.92■□□□□ 0.3
TRAPPC3-209ENST00000616395 GP5P40197 560 aa16.92■□□□□ 0.3
TRAPPC3-209ENST00000616395 MDH1P40925 334 aaKnown RBP16.92■□□□□ 0.3
TRAPPC3-209ENST00000616395 SLC18A1P54219 525 aa16.92■□□□□ 0.3
TRAPPC3-209ENST00000616395 CRADDP78560 199 aa16.92■□□□□ 0.3
TRAPPC3-209ENST00000616395 AIMP2Q13155 320 aaKnown RBP16.92■□□□□ 0.3
TRAPPC3-209ENST00000616395 NFE2L1Q14494 772 aa16.92■□□□□ 0.3
TRAPPC3-209ENST00000616395 POU6F1Q14863 301 aa16.92■□□□□ 0.3
TRAPPC3-209ENST00000616395 C1orf189Q5VU69 101 aa16.92■□□□□ 0.3
TRAPPC3-209ENST00000616395 FCRL6Q6DN72 434 aa16.92■□□□□ 0.3
TRAPPC3-209ENST00000616395 TRABD2AQ86V40 505 aa16.92■□□□□ 0.3
TRAPPC3-209ENST00000616395 EXOC3L1Q86VI1 746 aa16.92■□□□□ 0.3
TRAPPC3-209ENST00000616395 ZGRF1Q86YA3 2104 aa16.92■□□□□ 0.3
TRAPPC3-209ENST00000616395 BCORP1Q8N888 145 aa16.92■□□□□ 0.3
TRAPPC3-209ENST00000616395 DCAKDQ8WVC6 231 aa16.92■□□□□ 0.3
TRAPPC3-209ENST00000616395 C17orf62Q9BQA9 187 aa16.92■□□□□ 0.3
TRAPPC3-209ENST00000616395 WDR83Q9BRX9 315 aaKnown RBP16.92■□□□□ 0.3
TRAPPC3-209ENST00000616395 PIH1D1Q9NWS0 290 aaKnown RBP16.92■□□□□ 0.3
TRAPPC3-209ENST00000616395 GPN3Q9UHW5 284 aaPredicted RBP16.92■□□□□ 0.3
TRAPPC3-209ENST00000616395 POMT2Q9UKY4 750 aa16.92■□□□□ 0.3
TRAPPC3-209ENST00000616395 NIPBLQ6KC79 2804 aaeCLIP16.92■□□□□ 0.3
TRAPPC3-209ENST00000616395 TRGV8A0A0C4DH27 118 aa16.91■□□□□ 0.3
TRAPPC3-209ENST00000616395 C2orf81A6NN90 581 aa16.91■□□□□ 0.3
TRAPPC3-209ENST00000616395 PCDH17O14917 1159 aa16.91■□□□□ 0.3
TRAPPC3-209ENST00000616395 CNOT3O75175 753 aaKnown RBP16.91■□□□□ 0.3
TRAPPC3-209ENST00000616395 ALOX12BO75342 701 aa16.91■□□□□ 0.3
TRAPPC3-209ENST00000616395 UMODP07911 640 aa16.91■□□□□ 0.3
TRAPPC3-209ENST00000616395 HBQ1P09105 142 aa16.91■□□□□ 0.3
TRAPPC3-209ENST00000616395 CAPN3P20807 821 aa16.91■□□□□ 0.3
TRAPPC3-209ENST00000616395 GNGT1P63211 74 aa16.91■□□□□ 0.3
TRAPPC3-209ENST00000616395 TLR1Q15399 786 aa16.91■□□□□ 0.3
TRAPPC3-209ENST00000616395 ATP13A5Q4VNC0 1218 aa16.91■□□□□ 0.3
TRAPPC3-209ENST00000616395 UBAP2Q5T6F2 1119 aaKnown RBP16.91■□□□□ 0.3
TRAPPC3-209ENST00000616395 AGAP7PQ5VUJ5 663 aa16.91■□□□□ 0.3
TRAPPC3-209ENST00000616395 GLT6D1Q7Z4J2 308 aa16.91■□□□□ 0.3
TRAPPC3-209ENST00000616395 GDAP1Q8TB36 358 aa16.91■□□□□ 0.3
TRAPPC3-209ENST00000616395 AGAP4Q96P64 663 aa16.91■□□□□ 0.3
TRAPPC3-209ENST00000616395 VPS35Q96QK1 796 aa16.91■□□□□ 0.3
TRAPPC3-209ENST00000616395 INSM2Q96T92 566 aaPredicted RBP16.91■□□□□ 0.3
TRAPPC3-209ENST00000616395 PKDREJQ9NTG1 2253 aa16.91■□□□□ 0.3
TRAPPC3-209ENST00000616395 SPTBP11277 2137 aa16.9■□□□□ 0.3
TRAPPC3-209ENST00000616395 CCL21O00585 134 aa16.9■□□□□ 0.3
TRAPPC3-209ENST00000616395 ZWINTO95229 277 aa16.9■□□□□ 0.3
TRAPPC3-209ENST00000616395 ST6GAL1P15907 406 aa16.9■□□□□ 0.3
TRAPPC3-209ENST00000616395 TDGF1P3P51864 188 aa16.9■□□□□ 0.3
TRAPPC3-209ENST00000616395 CTSCP53634 463 aa16.9■□□□□ 0.3
TRAPPC3-209ENST00000616395 CSE1LP55060 971 aaKnown RBP16.9■□□□□ 0.3
TRAPPC3-209ENST00000616395 PRAMEP78395 509 aa16.9■□□□□ 0.3
TRAPPC3-209ENST00000616395 SLC9A5Q14940 896 aa16.9■□□□□ 0.3
TRAPPC3-209ENST00000616395 PRAMEF13Q5VWM6 474 aa16.9■□□□□ 0.3
TRAPPC3-209ENST00000616395 ZNF324BQ6AW86 544 aaPredicted RBP16.9■□□□□ 0.3
TRAPPC3-209ENST00000616395 KIAA0930Q6ICG6 404 aaPredicted RBP16.9■□□□□ 0.3
TRAPPC3-209ENST00000616395 MMP21Q8N119 569 aa16.9■□□□□ 0.3
TRAPPC3-209ENST00000616395 AGGF1Q8N302 714 aaeCLIP16.9■□□□□ 0.3
TRAPPC3-209ENST00000616395 RASGEF1AQ8N9B8 481 aa16.9■□□□□ 0.3
TRAPPC3-209ENST00000616395 OR4E2Q8NGC2 313 aa16.9■□□□□ 0.3
TRAPPC3-209ENST00000616395 BRSK1Q8TDC3 778 aa16.9■□□□□ 0.3
TRAPPC3-209ENST00000616395 PTERQ96BW5 349 aa16.9■□□□□ 0.3
TRAPPC3-209ENST00000616395 CABS1Q96KC9 395 aa16.9■□□□□ 0.3
TRAPPC3-209ENST00000616395 C12orf66Q96MD2 445 aa16.9■□□□□ 0.3
TRAPPC3-209ENST00000616395 KLHL25Q9H0H3 589 aa16.9■□□□□ 0.3
TRAPPC3-209ENST00000616395 WWP1Q9H0M0 922 aa16.9■□□□□ 0.3
TRAPPC3-209ENST00000616395 KIR3DX1Q9H7L2 352 aa16.9■□□□□ 0.3
TRAPPC3-209ENST00000616395 CHRAC1Q9NRG0 131 aa16.9■□□□□ 0.3
TRAPPC3-209ENST00000616395 EURLQ9NYK6 297 aa16.9■□□□□ 0.3
TRAPPC3-209ENST00000616395 IFT80Q9P2H3 777 aaPredicted RBP16.9■□□□□ 0.3
TRAPPC3-209ENST00000616395 CTNNAL1Q9UBT7 734 aa16.9■□□□□ 0.3
TRAPPC3-209ENST00000616395 NDOR1Q9UHB4 597 aa16.9■□□□□ 0.3
TRAPPC3-209ENST00000616395 FBXL4Q9UKA2 621 aa16.9■□□□□ 0.3
TRAPPC3-209ENST00000616395 RIMKLBQ9ULI2 386 aa16.9■□□□□ 0.3
TRAPPC3-209ENST00000616395 CDYLQ9Y232 598 aa16.9■□□□□ 0.3
TRAPPC3-209ENST00000616395 ARL5AQ9Y689 179 aa16.9■□□□□ 0.3
TRAPPC3-209ENST00000616395 FER1L5A0AVI2 2057 aa16.89■□□□□ 0.29
TRAPPC3-209ENST00000616395 SVILO95425 2214 aa16.89■□□□□ 0.29
TRAPPC3-209ENST00000616395 TM9SF1O15321 606 aa16.89■□□□□ 0.29
TRAPPC3-209ENST00000616395 PRPF4O43172 522 aaKnown RBP eCLIP16.89■□□□□ 0.291e-9■■■■■ 35.4
TRAPPC3-209ENST00000616395 NADKO95544 446 aaPredicted RBP16.89■□□□□ 0.29
TRAPPC3-209ENST00000616395 PBLDP30039 288 aaPredicted RBP16.89■□□□□ 0.29
TRAPPC3-209ENST00000616395 GYS2P54840 703 aa16.89■□□□□ 0.29
TRAPPC3-209ENST00000616395 PRKAA1Q13131 559 aa16.89■□□□□ 0.29
TRAPPC3-209ENST00000616395 TERF2Q15554 542 aa16.89■□□□□ 0.29
TRAPPC3-209ENST00000616395 TSTD2Q5T7W7 516 aa16.89■□□□□ 0.29
TRAPPC3-209ENST00000616395 DENND5AQ6IQ26 1287 aa16.89■□□□□ 0.29
TRAPPC3-209ENST00000616395 FAM151BQ6UXP7 276 aa16.89■□□□□ 0.29
TRAPPC3-209ENST00000616395 RPTNQ6XPR3 784 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms