RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 SHQ1Q6PI26 577 aaKnown RBP21.33■■□□□ 1
POLR2J3-220ENST00000613744 DENND1CQ8IV53 801 aa21.33■■□□□ 1
POLR2J3-220ENST00000613744 GALNT12Q8IXK2 581 aa21.33■■□□□ 1
POLR2J3-220ENST00000613744 HS3ST5Q8IZT8 346 aa21.33■■□□□ 1
POLR2J3-220ENST00000613744 SPERTQ8NA61 448 aa21.33■■□□□ 1
POLR2J3-220ENST00000613744 ZNF548Q8NEK5 533 aaPredicted RBP21.33■■□□□ 1
POLR2J3-220ENST00000613744 FRS2Q8WU20 508 aa21.33■■□□□ 1
POLR2J3-220ENST00000613744 MRGPRX2Q96LB1 330 aa21.33■■□□□ 1
POLR2J3-220ENST00000613744 FBXL12Q9NXK8 326 aa21.33■■□□□ 1
POLR2J3-220ENST00000613744 PCDHGB6Q9Y5F9 930 aa21.33■■□□□ 1
POLR2J3-220ENST00000613744 HS3ST4Q9Y661 456 aa21.33■■□□□ 1
POLR2J3-220ENST00000613744 CAPN5O15484 640 aaPredicted RBP21.32■■□□□ 1
POLR2J3-220ENST00000613744 AIREO43918 545 aa21.32■■□□□ 1
POLR2J3-220ENST00000613744 MLYCDO95822 493 aa21.32■■□□□ 1
POLR2J3-220ENST00000613744 FADS2O95864 444 aaKnown RBP21.32■■□□□ 1
POLR2J3-220ENST00000613744 FTH1P02794 183 aa21.32■■□□□ 1
POLR2J3-220ENST00000613744 SERPINF2P08697 491 aa21.32■■□□□ 1
POLR2J3-220ENST00000613744 ALOX12P18054 663 aa21.32■■□□□ 1
POLR2J3-220ENST00000613744 IGFBP5P24593 272 aa21.32■■□□□ 1
POLR2J3-220ENST00000613744 CORO1AP31146 461 aaKnown RBP21.32■■□□□ 1
POLR2J3-220ENST00000613744 FMO3P31513 532 aa21.32■■□□□ 1
POLR2J3-220ENST00000613744 GGT5P36269 586 aa21.32■■□□□ 1
POLR2J3-220ENST00000613744 WDR45BQ5MNZ6 344 aa21.32■■□□□ 1
POLR2J3-220ENST00000613744 ZNF540Q8NDQ6 660 aa21.32■■□□□ 1
POLR2J3-220ENST00000613744 FBXO30Q8TB52 745 aa21.32■■□□□ 1
POLR2J3-220ENST00000613744 FIG4Q92562 907 aa21.32■■□□□ 1
POLR2J3-220ENST00000613744 RPL3LQ92901 407 aaKnown RBP21.32■■□□□ 1
POLR2J3-220ENST00000613744 RHBDF1Q96CC6 855 aa21.32■■□□□ 1
POLR2J3-220ENST00000613744 NSUN5Q96P11 429 aaKnown RBP21.32■■□□□ 1
POLR2J3-220ENST00000613744 DIABLOQ9NR28 239 aa21.32■■□□□ 1
POLR2J3-220ENST00000613744 KERAO60938 352 aa21.32■■□□□ 1
POLR2J3-220ENST00000613744 MTPNP58546 118 aa21.32■■□□□ 1
POLR2J3-220ENST00000613744 SMAD4Q13485 552 aaKnown RBP21.32■■□□□ 1
POLR2J3-220ENST00000613744 PIK3R6Q5UE93 754 aa21.32■■□□□ 1
POLR2J3-220ENST00000613744 TIGD7Q6NT04 549 aaPredicted RBP21.32■■□□□ 1
POLR2J3-220ENST00000613744 MICU2Q8IYU8 434 aa21.32■■□□□ 1
POLR2J3-220ENST00000613744 FAM86B1Q8N7N1 296 aa21.32■■□□□ 1
POLR2J3-220ENST00000613744 EXT2Q93063 718 aa21.32■■□□□ 1
POLR2J3-220ENST00000613744 RSPRY1Q96DX4 576 aa21.32■■□□□ 1
POLR2J3-220ENST00000613744 ASB16Q96NS5 453 aa21.32■■□□□ 1
POLR2J3-220ENST00000613744 LRRC3BQ96PB8 259 aa21.32■■□□□ 1
POLR2J3-220ENST00000613744 C6orf62Q9GZU0 229 aaPredicted RBP21.32■■□□□ 1
POLR2J3-220ENST00000613744 MIA3Q5JRA6 1907 aa21.31■■□□□ 1
POLR2J3-220ENST00000613744 DOCK8Q8NF50 2099 aa21.31■■□□□ 1
POLR2J3-220ENST00000613744 LOC105371267A0A1B0GV96 52 aa21.31■■□□□ 1
POLR2J3-220ENST00000613744 STX16O14662 325 aa21.31■■□□□ 1
POLR2J3-220ENST00000613744 IGLV3-27P01718 113 aa21.31■■□□□ 1
POLR2J3-220ENST00000613744 RRM2P31350 389 aa21.31■■□□□ 1
POLR2J3-220ENST00000613744 STARD3Q14849 445 aa21.31■■□□□ 1
POLR2J3-220ENST00000613744 OR4D1Q15615 310 aa21.31■■□□□ 1
POLR2J3-220ENST00000613744 RFPL4BQ6ZWI9 263 aa21.31■■□□□ 1
POLR2J3-220ENST00000613744 VN1R5Q7Z5H4 357 aa21.31■■□□□ 1
POLR2J3-220ENST00000613744 FBXO39Q8N4B4 442 aa21.31■■□□□ 1
POLR2J3-220ENST00000613744 OR52K2Q8NGK3 314 aa21.31■■□□□ 1
POLR2J3-220ENST00000613744 PPM1MQ96MI6 270 aa21.31■■□□□ 1
POLR2J3-220ENST00000613744 NECTIN4Q96NY8 510 aa21.31■■□□□ 1
POLR2J3-220ENST00000613744 TMEM246Q9BRR3 403 aa21.31■■□□□ 1
POLR2J3-220ENST00000613744 NUAK2Q9H093 628 aa21.31■■□□□ 1
POLR2J3-220ENST00000613744 ATP13A1Q9HD20 1204 aa21.31■■□□□ 1
POLR2J3-220ENST00000613744 GDE1Q9NZC3 331 aa21.31■■□□□ 1
POLR2J3-220ENST00000613744 FAM20BO75063 409 aa21.3■■□□□ 1
POLR2J3-220ENST00000613744 GOT2P00505 430 aaKnown RBP21.3■■□□□ 1
POLR2J3-220ENST00000613744 GTF2E2P29084 291 aaKnown RBP21.3■■□□□ 1
POLR2J3-220ENST00000613744 HTR7P34969 479 aa21.3■■□□□ 1
POLR2J3-220ENST00000613744 CHRNA4P43681 627 aa21.3■■□□□ 1
POLR2J3-220ENST00000613744 RAP1GAP2Q684P5 730 aa21.3■■□□□ 1
POLR2J3-220ENST00000613744 TXNDC11Q6PKC3 985 aa21.3■■□□□ 1
POLR2J3-220ENST00000613744 CELF2-AS1Q8N7Q2 184 aa21.3■■□□□ 1
POLR2J3-220ENST00000613744 STAG3L4Q8TBR4 150 aa21.3■■□□□ 1
POLR2J3-220ENST00000613744 SMARCD2Q92925 531 aa21.3■■□□□ 1
POLR2J3-220ENST00000613744 KIAA1191Q96A73 305 aa21.3■■□□□ 1
POLR2J3-220ENST00000613744 TMCO6Q96DC7 493 aa21.3■■□□□ 1
POLR2J3-220ENST00000613744 CELF6Q96J87 481 aaKnown RBP21.3■■□□□ 1
POLR2J3-220ENST00000613744 ST6GAL2Q96JF0 529 aa21.3■■□□□ 1
POLR2J3-220ENST00000613744 EXD2Q9NVH0 621 aa21.3■■□□□ 1
POLR2J3-220ENST00000613744 PNMA8BQ9ULN7 279 aaPredicted RBP21.3■■□□□ 1
POLR2J3-220ENST00000613744 TRAPPC4Q9Y296 219 aa21.3■■□□□ 1
POLR2J3-220ENST00000613744 NUP205Q92621 2012 aa21.3■■□□□ 1
POLR2J3-220ENST00000613744 ELOVL7A1L3X0 281 aa21.3■■□□□ 1
POLR2J3-220ENST00000613744 RECQL5O94762 991 aaPredicted RBP21.3■■□□□ 1
POLR2J3-220ENST00000613744 LAMP2P13473 410 aa21.3■■□□□ 1
POLR2J3-220ENST00000613744 ZNF37AP17032 561 aaPredicted RBP21.3■■□□□ 1
POLR2J3-220ENST00000613744 CTSKP43235 329 aa21.3■■□□□ 1
POLR2J3-220ENST00000613744 CLK3P49761 638 aaKnown RBP21.3■■□□□ 1
POLR2J3-220ENST00000613744 SERPINH1P50454 418 aaKnown RBP21.3■■□□□ 1
POLR2J3-220ENST00000613744 GALK2Q01415 458 aa21.3■■□□□ 1
POLR2J3-220ENST00000613744 RING1Q06587 406 aa21.3■■□□□ 1
POLR2J3-220ENST00000613744 MS4A13Q5J8X5 152 aa21.3■■□□□ 1
POLR2J3-220ENST00000613744 C6orf136Q5SQH8 315 aa21.3■■□□□ 1
POLR2J3-220ENST00000613744 TANGO2Q6ICL3 276 aa21.3■■□□□ 1
POLR2J3-220ENST00000613744 TMEM179BQ7Z7N9 219 aa21.3■■□□□ 1
POLR2J3-220ENST00000613744 C14orf80Q86SX3 495 aa21.3■■□□□ 1
POLR2J3-220ENST00000613744 TSPYL5Q86VY4 417 aaPredicted RBP21.3■■□□□ 1
POLR2J3-220ENST00000613744 SYTL1Q8IYJ3 562 aa21.3■■□□□ 1
POLR2J3-220ENST00000613744 FAM162AQ96A26 154 aa21.3■■□□□ 1
POLR2J3-220ENST00000613744 DCAF13Q9NV06 445 aaKnown RBP21.3■■□□□ 1
POLR2J3-220ENST00000613744 EHD3Q9NZN3 535 aa21.3■■□□□ 1
POLR2J3-220ENST00000613744 AGO1Q9UL18 857 aaKnown RBP21.3■■□□□ 1
POLR2J3-220ENST00000613744 LRRC14BA6NHZ5 514 aa21.29■■□□□ 1
POLR2J3-220ENST00000613744 CD3EAPO15446 510 aaKnown RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms