RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 WDR4P57081 412 aaKnown RBP16.99■□□□□ 0.31
HMGXB3-206ENST00000613459 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.99■□□□□ 0.31
HMGXB3-206ENST00000613459 PUS10Q3MIT2 529 aaKnown RBP16.99■□□□□ 0.31
HMGXB3-206ENST00000613459 ADGRF1Q5T601 910 aa16.99■□□□□ 0.31
HMGXB3-206ENST00000613459 RBM23Q86U06 439 aaKnown RBP16.99■□□□□ 0.31
HMGXB3-206ENST00000613459 AURKBQ96GD4 344 aaPredicted RBP16.99■□□□□ 0.31
HMGXB3-206ENST00000613459 IL36AQ9UHA7 158 aa16.99■□□□□ 0.31
HMGXB3-206ENST00000613459 ARL5AQ9Y689 179 aa16.99■□□□□ 0.31
HMGXB3-206ENST00000613459 OR1I1O60431 355 aa16.99■□□□□ 0.31
HMGXB3-206ENST00000613459 MYCLP1P12525 358 aaPredicted RBP16.99■□□□□ 0.31
HMGXB3-206ENST00000613459 ABHD18Q0P651 414 aa16.99■□□□□ 0.31
HMGXB3-206ENST00000613459 MAB21L1Q13394 359 aa16.99■□□□□ 0.31
HMGXB3-206ENST00000613459 SLBPQ14493 270 aaKnown RBP eCLIP16.99■□□□□ 0.31
HMGXB3-206ENST00000613459 PAFAH1B3Q15102 231 aaKnown RBP16.99■□□□□ 0.31
HMGXB3-206ENST00000613459 ABCA11PQ4W5N1 156 aa16.99■□□□□ 0.31
HMGXB3-206ENST00000613459 ELAC1Q9H777 363 aaKnown RBP16.99■□□□□ 0.31
HMGXB3-206ENST00000613459 TRIM36Q9NQ86 728 aa16.99■□□□□ 0.31
HMGXB3-206ENST00000613459 ZNF69Q9UC07 566 aa16.99■□□□□ 0.31
HMGXB3-206ENST00000613459 CCL22O00626 93 aa16.98■□□□□ 0.31
HMGXB3-206ENST00000613459 RAB36O95755 333 aa16.98■□□□□ 0.31
HMGXB3-206ENST00000613459 DBIP07108 87 aaKnown RBP16.98■□□□□ 0.31
HMGXB3-206ENST00000613459 PITRM1Q5JRX3 1037 aa16.98■□□□□ 0.31
HMGXB3-206ENST00000613459 CHCHD4Q8N4Q1 142 aa16.98■□□□□ 0.31
HMGXB3-206ENST00000613459 DCBLD1Q8N8Z6 715 aa16.98■□□□□ 0.31
HMGXB3-206ENST00000613459 KREMEN2Q8NCW0 462 aa16.98■□□□□ 0.31
HMGXB3-206ENST00000613459 ING5Q8WYH8 240 aa16.98■□□□□ 0.31
HMGXB3-206ENST00000613459 NXPE2Q96DL1 559 aa16.98■□□□□ 0.31
HMGXB3-206ENST00000613459 EBF4Q9BQW3 602 aa16.98■□□□□ 0.31
HMGXB3-206ENST00000613459 TOR3AQ9H497 397 aa16.98■□□□□ 0.31
HMGXB3-206ENST00000613459 AKTIPQ9H8T0 292 aa16.98■□□□□ 0.31
HMGXB3-206ENST00000613459 HLA-DQB2P05538 268 aa16.98■□□□□ 0.31
HMGXB3-206ENST00000613459 PGAM2P15259 253 aa16.98■□□□□ 0.31
HMGXB3-206ENST00000613459 VIPR1P32241 457 aa16.98■□□□□ 0.31
HMGXB3-206ENST00000613459 RYKP34925 604 aa16.98■□□□□ 0.31
HMGXB3-206ENST00000613459 CDKN2AIPNLQ96HQ2 116 aa16.98■□□□□ 0.31
HMGXB3-206ENST00000613459 SUSD3Q96L08 255 aa16.98■□□□□ 0.31
HMGXB3-206ENST00000613459 GAS2L1Q99501 681 aaPredicted RBP16.98■□□□□ 0.31
HMGXB3-206ENST00000613459 GPR22Q99680 433 aa16.98■□□□□ 0.31
HMGXB3-206ENST00000613459 COL20A1Q9P218 1284 aa16.98■□□□□ 0.31
HMGXB3-206ENST00000613459 HLA-DPB1P04440 258 aa16.98■□□□□ 0.31
HMGXB3-206ENST00000613459 CSKP41240 450 aa16.98■□□□□ 0.31
HMGXB3-206ENST00000613459 XKRXQ6PP77 449 aa16.98■□□□□ 0.31
HMGXB3-206ENST00000613459 DENND1AQ8TEH3 1009 aa16.98■□□□□ 0.31
HMGXB3-206ENST00000613459 OR2AG1Q9H205 316 aa16.98■□□□□ 0.31
HMGXB3-206ENST00000613459 TNFRSF10DQ9UBN6 386 aa16.98■□□□□ 0.31
HMGXB3-206ENST00000613459 A0A1W2PRQ8 180 aa16.98■□□□□ 0.31
HMGXB3-206ENST00000613459 ENGP17813 658 aa16.98■□□□□ 0.31
HMGXB3-206ENST00000613459 LMO2P25791 158 aa16.98■□□□□ 0.31
HMGXB3-206ENST00000613459 STOMP27105 288 aa16.98■□□□□ 0.31
HMGXB3-206ENST00000613459 PUM1Q14671 1186 aaKnown RBP eCLIP16.98■□□□□ 0.31
HMGXB3-206ENST00000613459 SOWAHAQ2M3V2 549 aa16.98■□□□□ 0.31
HMGXB3-206ENST00000613459 PAQR3Q6TCH7 311 aa16.98■□□□□ 0.31
HMGXB3-206ENST00000613459 CIR1Q86X95 450 aaPredicted RBP16.98■□□□□ 0.31
HMGXB3-206ENST00000613459 PDSS2Q86YH6 399 aa16.98■□□□□ 0.31
HMGXB3-206ENST00000613459 SMPDL3AQ92484 453 aa16.98■□□□□ 0.31
HMGXB3-206ENST00000613459 ZNF641Q96N77 438 aaPredicted RBP16.98■□□□□ 0.31
HMGXB3-206ENST00000613459 COL21A1Q96P44 957 aa16.98■□□□□ 0.31
HMGXB3-206ENST00000613459 WDR26Q9H7D7 661 aa16.98■□□□□ 0.31
HMGXB3-206ENST00000613459 ISPDA4D126 451 aa16.97■□□□□ 0.31
HMGXB3-206ENST00000613459 C8AP07357 584 aa16.97■□□□□ 0.31
HMGXB3-206ENST00000613459 MTHFD1P11586 935 aaKnown RBP16.97■□□□□ 0.31
HMGXB3-206ENST00000613459 ERP29P30040 261 aaKnown RBP16.97■□□□□ 0.31
HMGXB3-206ENST00000613459 VLDLRP98155 873 aa16.97■□□□□ 0.31
HMGXB3-206ENST00000613459 SMARCD3Q6STE5 483 aa16.97■□□□□ 0.31
HMGXB3-206ENST00000613459 EPGNQ6UW88 154 aa16.97■□□□□ 0.31
HMGXB3-206ENST00000613459 RBM12BQ8IXT5 1001 aaKnown RBP16.97■□□□□ 0.31
HMGXB3-206ENST00000613459 C11orf84Q9BUA3 381 aaPredicted RBP16.97■□□□□ 0.31
HMGXB3-206ENST00000613459 UCK2Q9BZX2 261 aa16.97■□□□□ 0.31
HMGXB3-206ENST00000613459 TRPV4Q9HBA0 871 aa16.97■□□□□ 0.31
HMGXB3-206ENST00000613459 MTMR10Q9NXD2 777 aa16.97■□□□□ 0.31
HMGXB3-206ENST00000613459 ZNF670-ZNF695F2Z2N8 137 aa16.97■□□□□ 0.31
HMGXB3-206ENST00000613459 EBLN1P0CF75 366 aa16.97■□□□□ 0.31
HMGXB3-206ENST00000613459 MAPK3P27361 379 aaPredicted RBP16.97■□□□□ 0.31
HMGXB3-206ENST00000613459 EFR3AQ14156 821 aa16.97■□□□□ 0.31
HMGXB3-206ENST00000613459 ZNF676Q8N7Q3 588 aa16.97■□□□□ 0.31
HMGXB3-206ENST00000613459 FBXL18Q96ME1 805 aa16.97■□□□□ 0.31
HMGXB3-206ENST00000613459 TMEM5Q9Y2B1 443 aa16.97■□□□□ 0.31
HMGXB3-206ENST00000613459 PRKAB1Q9Y478 270 aa16.97■□□□□ 0.31
HMGXB3-206ENST00000613459 TMEM88BA6NKF7 163 aa16.97■□□□□ 0.31
HMGXB3-206ENST00000613459 PIM1P11309 404 aaPredicted RBP16.97■□□□□ 0.31
HMGXB3-206ENST00000613459 PLA2G16P53816 162 aa16.97■□□□□ 0.31
HMGXB3-206ENST00000613459 DNAJB13P59910 316 aa16.97■□□□□ 0.31
HMGXB3-206ENST00000613459 PRPF38BQ5VTL8 546 aaKnown RBP16.97■□□□□ 0.31
HMGXB3-206ENST00000613459 SPRYD7Q5W111 196 aa16.97■□□□□ 0.31
HMGXB3-206ENST00000613459 TNFAIP8L2Q6P589 184 aaPredicted RBP16.97■□□□□ 0.31
HMGXB3-206ENST00000613459 SETD6Q8TBK2 473 aa16.97■□□□□ 0.31
HMGXB3-206ENST00000613459 ZUFSPQ96AP4 578 aa16.97■□□□□ 0.31
HMGXB3-206ENST00000613459 IRF2BPLQ9H1B7 796 aa16.97■□□□□ 0.31
HMGXB3-206ENST00000613459 DPEP2Q9H4A9 486 aa16.97■□□□□ 0.31
HMGXB3-206ENST00000613459 CPNE3O75131 537 aaKnown RBP16.97■□□□□ 0.31
HMGXB3-206ENST00000613459 TBX10O75333 385 aa16.97■□□□□ 0.31
HMGXB3-206ENST00000613459 IFNA21P01568 189 aa16.97■□□□□ 0.31
HMGXB3-206ENST00000613459 IFI30P13284 250 aa16.97■□□□□ 0.31
HMGXB3-206ENST00000613459 EPCAMP16422 314 aa16.97■□□□□ 0.31
HMGXB3-206ENST00000613459 SLC15A1P46059 708 aa16.97■□□□□ 0.31
HMGXB3-206ENST00000613459 CLCN2P51788 898 aa16.97■□□□□ 0.31
HMGXB3-206ENST00000613459 ST3GAL3Q11203 375 aa16.97■□□□□ 0.31
HMGXB3-206ENST00000613459 SYCE2Q6PIF2 218 aa16.97■□□□□ 0.31
HMGXB3-206ENST00000613459 ERMP1Q7Z2K6 904 aa16.97■□□□□ 0.31
HMGXB3-206ENST00000613459 SLC22A16Q86VW1 577 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms