RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 ATP13A5Q4VNC0 1218 aa10.56□□□□□ -0.72
FAM3A-221ENST00000612856 FAM26DQ5JW98 314 aa10.56□□□□□ -0.72
FAM3A-221ENST00000612856 GPRIN3Q6ZVF9 776 aa10.56□□□□□ -0.72
FAM3A-221ENST00000612856 MAVSQ7Z434 540 aa10.56□□□□□ -0.72
FAM3A-221ENST00000612856 ELMOD2Q8IZ81 293 aa10.56□□□□□ -0.72
FAM3A-221ENST00000612856 SPPL2AQ8TCT8 520 aa10.56□□□□□ -0.72
FAM3A-221ENST00000612856 TFGQ92734 400 aaPredicted RBP10.56□□□□□ -0.72
FAM3A-221ENST00000612856 RERGQ96A58 199 aaPredicted RBP10.56□□□□□ -0.72
FAM3A-221ENST00000612856 MRPL38Q96DV4 380 aaKnown RBP10.56□□□□□ -0.72
FAM3A-221ENST00000612856 NPLQ9BXD5 320 aaPredicted RBP10.56□□□□□ -0.72
FAM3A-221ENST00000612856 SGK2Q9HBY8 427 aa10.56□□□□□ -0.72
FAM3A-221ENST00000612856 EXOSC4Q9NPD3 245 aaKnown RBP10.56□□□□□ -0.72
FAM3A-221ENST00000612856 SLC22A14Q9Y267 594 aa10.56□□□□□ -0.72
FAM3A-221ENST00000612856 N6AMT1Q9Y5N5 214 aa10.56□□□□□ -0.72
FAM3A-221ENST00000612856 COPG1Q9Y678 874 aaKnown RBP10.56□□□□□ -0.72
FAM3A-221ENST00000612856 H3BMM5 538 aa10.56□□□□□ -0.72
FAM3A-221ENST00000612856 TGFB1P01137 390 aa10.56□□□□□ -0.72
FAM3A-221ENST00000612856 SNRPB2P08579 225 aaKnown RBP10.56□□□□□ -0.72
FAM3A-221ENST00000612856 ZNF26P17031 533 aaPredicted RBP10.56□□□□□ -0.72
FAM3A-221ENST00000612856 PRKACBP22694 351 aa10.56□□□□□ -0.72
FAM3A-221ENST00000612856 NSG1P42857 185 aa10.56□□□□□ -0.72
FAM3A-221ENST00000612856 DEFA1P59665 94 aa10.56□□□□□ -0.72
FAM3A-221ENST00000612856 DEFA3P59666 94 aa10.56□□□□□ -0.72
FAM3A-221ENST00000612856 RAB8AP61006 207 aa10.56□□□□□ -0.72
FAM3A-221ENST00000612856 RING1Q06587 406 aa10.56□□□□□ -0.72
FAM3A-221ENST00000612856 PIGGQ5H8A4 983 aa10.56□□□□□ -0.72
FAM3A-221ENST00000612856 COLEC12Q5KU26 742 aa10.56□□□□□ -0.72
FAM3A-221ENST00000612856 NADSYN1Q6IA69 706 aa10.56□□□□□ -0.72
FAM3A-221ENST00000612856 CAMKK1Q8N5S9 505 aa10.56□□□□□ -0.72
FAM3A-221ENST00000612856 KLHDC7BQ96G42 594 aa10.56□□□□□ -0.72
FAM3A-221ENST00000612856 BEX2Q9BXY8 128 aa10.56□□□□□ -0.72
FAM3A-221ENST00000612856 RDH14Q9HBH5 336 aa10.56□□□□□ -0.72
FAM3A-221ENST00000612856 SMPD3Q9NY59 655 aaPredicted RBP10.56□□□□□ -0.72
FAM3A-221ENST00000612856 KLF15Q9UIH9 416 aa10.56□□□□□ -0.72
FAM3A-221ENST00000612856 ZDHHC2Q9UIJ5 367 aa10.56□□□□□ -0.72
FAM3A-221ENST00000612856 RAP2CQ9Y3L5 183 aa10.56□□□□□ -0.72
FAM3A-221ENST00000612856 SPTBN1Q01082 2364 aaKnown RBP10.55□□□□□ -0.72
FAM3A-221ENST00000612856 KRT87PA6NCN2 255 aa10.55□□□□□ -0.72
FAM3A-221ENST00000612856 TSPAN6O43657 245 aa10.55□□□□□ -0.72
FAM3A-221ENST00000612856 HS6ST1O60243 411 aa10.55□□□□□ -0.72
FAM3A-221ENST00000612856 CDC123O75794 336 aaPredicted RBP10.55□□□□□ -0.72
FAM3A-221ENST00000612856 MATN1P21941 496 aa10.55□□□□□ -0.72
FAM3A-221ENST00000612856 RPS9P46781 194 aaKnown RBP10.55□□□□□ -0.72
FAM3A-221ENST00000612856 VBP1P61758 197 aa10.55□□□□□ -0.72
FAM3A-221ENST00000612856 ZNF789Q5FWF6 425 aa10.55□□□□□ -0.72
FAM3A-221ENST00000612856 EOGTQ5NDL2 527 aa10.55□□□□□ -0.72
FAM3A-221ENST00000612856 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.55□□□□□ -0.72
FAM3A-221ENST00000612856 OR2T34Q8NGX1 318 aa10.55□□□□□ -0.72
FAM3A-221ENST00000612856 OR2T3Q8NH03 318 aa10.55□□□□□ -0.72
FAM3A-221ENST00000612856 MCFD2Q8NI22 146 aa10.55□□□□□ -0.72
FAM3A-221ENST00000612856 FAR1Q8WVX9 515 aa10.55□□□□□ -0.72
FAM3A-221ENST00000612856 ATOH1Q92858 354 aaPredicted RBP10.55□□□□□ -0.72
FAM3A-221ENST00000612856 FGF14Q92915 247 aa10.55□□□□□ -0.72
FAM3A-221ENST00000612856 MAELQ96JY0 434 aaKnown RBP10.55□□□□□ -0.72
FAM3A-221ENST00000612856 MRGPRX2Q96LB1 330 aa10.55□□□□□ -0.72
FAM3A-221ENST00000612856 KCTD5Q9NXV2 234 aa10.55□□□□□ -0.72
FAM3A-221ENST00000612856 ALKBH4Q9NXW9 302 aa10.55□□□□□ -0.72
FAM3A-221ENST00000612856 WDR90Q96KV7 1748 aa10.55□□□□□ -0.72
FAM3A-221ENST00000612856 POLR2CP19387 275 aaPredicted RBP10.55□□□□□ -0.72
FAM3A-221ENST00000612856 DDX6P26196 483 aaKnown RBP eCLIP10.55□□□□□ -0.72
FAM3A-221ENST00000612856 TMEM115Q12893 351 aaPredicted RBP10.55□□□□□ -0.72
FAM3A-221ENST00000612856 TAF1AQ15573 450 aaPredicted RBP10.55□□□□□ -0.72
FAM3A-221ENST00000612856 VPS26BQ4G0F5 336 aa10.55□□□□□ -0.72
FAM3A-221ENST00000612856 EPGNQ6UW88 154 aa10.55□□□□□ -0.72
FAM3A-221ENST00000612856 ZFP90Q8TF47 636 aa10.55□□□□□ -0.72
FAM3A-221ENST00000612856 RAB2BQ8WUD1 216 aa10.55□□□□□ -0.72
FAM3A-221ENST00000612856 VPS33AQ96AX1 596 aa10.55□□□□□ -0.72
FAM3A-221ENST00000612856 MUS81Q96NY9 551 aa10.55□□□□□ -0.72
FAM3A-221ENST00000612856 MYADMQ96S97 322 aa10.55□□□□□ -0.72
FAM3A-221ENST00000612856 RBBP8Q99708 897 aa10.55□□□□□ -0.72
FAM3A-221ENST00000612856 ZNF221Q9UK13 617 aa10.55□□□□□ -0.72
FAM3A-221ENST00000612856 LRRC14BA6NHZ5 514 aa10.55□□□□□ -0.72
FAM3A-221ENST00000612856 ALPPL2P10696 532 aa10.55□□□□□ -0.72
FAM3A-221ENST00000612856 SLC7A1P30825 629 aa10.55□□□□□ -0.72
FAM3A-221ENST00000612856 DLX2Q07687 328 aaPredicted RBP10.55□□□□□ -0.72
FAM3A-221ENST00000612856 DGKKQ5KSL6 1271 aa10.55□□□□□ -0.72
FAM3A-221ENST00000612856 FAM180BQ6P0A1 224 aa10.55□□□□□ -0.72
FAM3A-221ENST00000612856 NCEH1Q6PIU2 408 aa10.55□□□□□ -0.72
FAM3A-221ENST00000612856 BRAT1Q6PJG6 821 aa10.55□□□□□ -0.72
FAM3A-221ENST00000612856 GCNT7Q6ZNI0 430 aa10.55□□□□□ -0.72
FAM3A-221ENST00000612856 PROX1Q92786 737 aa10.55□□□□□ -0.72
FAM3A-221ENST00000612856 EXOSC8Q96B26 276 aaKnown RBP10.55□□□□□ -0.72
FAM3A-221ENST00000612856 ASB9Q96DX5 294 aa10.55□□□□□ -0.72
FAM3A-221ENST00000612856 FAM120BQ96EK7 910 aaKnown RBP10.55□□□□□ -0.72
FAM3A-221ENST00000612856 FCRL3Q96P31 734 aaPredicted RBP10.55□□□□□ -0.72
FAM3A-221ENST00000612856 RANBP9Q96S59 729 aa10.55□□□□□ -0.72
FAM3A-221ENST00000612856 STMN3Q9NZ72 180 aa10.55□□□□□ -0.72
FAM3A-221ENST00000612856 PRORSD1PA6NEY8 169 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 OR52A4PA6NMU1 304 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 H3BNC9 293 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 LAMP2P13473 410 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 CYP4B1P13584 511 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 HMGA1P17096 107 aaKnown RBP10.54□□□□□ -0.72
FAM3A-221ENST00000612856 AK4P27144 223 aaPredicted RBP10.54□□□□□ -0.72
FAM3A-221ENST00000612856 GTF2E2P29084 291 aaKnown RBP10.54□□□□□ -0.72
FAM3A-221ENST00000612856 S100A3P33764 101 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 RYKP34925 604 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 CRATP43155 626 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 LIMK2P53671 638 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 MCCD1P59942 119 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms