RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 ITCHQ96J02 903 aa14.27□□□□□ -0.13
CDH1-213ENST00000612417 MAGED4Q96JG8 741 aa14.27□□□□□ -0.13
CDH1-213ENST00000612417 MCCC1Q96RQ3 725 aaPredicted RBP14.27□□□□□ -0.13
CDH1-213ENST00000612417 COPS8Q99627 209 aa14.27□□□□□ -0.13
CDH1-213ENST00000612417 HEPHQ9BQS7 1158 aa14.27□□□□□ -0.13
CDH1-213ENST00000612417 SLC12A9Q9BXP2 914 aa14.27□□□□□ -0.13
CDH1-213ENST00000612417 MTG2Q9H4K7 406 aa14.27□□□□□ -0.13
CDH1-213ENST00000612417 RMND5AQ9H871 391 aa14.27□□□□□ -0.13
CDH1-213ENST00000612417 SMURF2Q9HAU4 748 aa14.27□□□□□ -0.13
CDH1-213ENST00000612417 ARL15Q9NXU5 204 aa14.27□□□□□ -0.13
CDH1-213ENST00000612417 SNX6Q9UNH7 406 aa14.27□□□□□ -0.13
CDH1-213ENST00000612417 FAF1Q9UNN5 650 aaPredicted RBP14.27□□□□□ -0.13
CDH1-213ENST00000612417 DLGAP4Q9Y2H0 992 aa14.27□□□□□ -0.13
CDH1-213ENST00000612417 PCDHGA8Q9Y5G5 932 aa14.27□□□□□ -0.13
CDH1-213ENST00000612417 SZT2Q5T011 3432 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 A0A1W2PPW3 197 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 WNT9AO14904 365 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 NOL3O60936 208 aaKnown RBP14.26□□□□□ -0.13
CDH1-213ENST00000612417 C8GP07360 202 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 AOAHP28039 575 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 CCR7P32248 378 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 MAGEA2P43356 314 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 SLC6A12P48065 614 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 HNMTP50135 292 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 ABHD18Q0P651 414 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 PDGFRLQ15198 375 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 CPSF6Q16630 551 aaKnown RBP eCLIP14.26□□□□□ -0.13
CDH1-213ENST00000612417 ARSIQ5FYB1 569 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 ZC3H12BQ5HYM0 836 aaKnown RBP14.26□□□□□ -0.13
CDH1-213ENST00000612417 FGD3Q5JSP0 725 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 C6orf141Q5SZD1 244 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 LRRC66Q68CR7 880 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 R3HCC1LQ7Z5L2 792 aaKnown RBP14.26□□□□□ -0.13
CDH1-213ENST00000612417 EID3Q8N140 333 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 SDR16C5Q8N3Y7 309 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 BEND7Q8N7W2 519 aaPredicted RBP14.26□□□□□ -0.13
CDH1-213ENST00000612417 L3MBTL4Q8NA19 623 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 CHDHQ8NE62 594 aaPredicted RBP14.26□□□□□ -0.13
CDH1-213ENST00000612417 TBC1D20Q96BZ9 403 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 THAP11Q96EK4 314 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 REXO5Q96IC2 774 aaKnown RBP14.26□□□□□ -0.13
CDH1-213ENST00000612417 FAM83CQ9BQN1 747 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 TBCDQ9BTW9 1192 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 NAA50Q9GZZ1 169 aaKnown RBP14.26□□□□□ -0.13
CDH1-213ENST00000612417 FANCEQ9HB96 536 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 TRPV4Q9HBA0 871 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 OBP2AQ9NY56 170 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 C3orf18Q9UK00 162 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 UTS2RQ9UKP6 389 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 TMX2-CTNND1H3BSU7 103 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 GNGT2O14610 69 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 NUAK1O60285 661 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 SRPRAP08240 638 aaKnown RBP14.26□□□□□ -0.13
CDH1-213ENST00000612417 INHBBP09529 407 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 MATN1P21941 496 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 FCARP24071 287 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 MAPK1P28482 360 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 S100A3P33764 101 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 PIGAP37287 484 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 DCTP40126 519 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 POLR2LP62875 67 aaKnown RBP14.26□□□□□ -0.13
CDH1-213ENST00000612417 NFATC3Q12968 1075 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 KCNAB2Q13303 367 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 ZXDCQ2QGD7 858 aaPredicted RBP14.26□□□□□ -0.13
CDH1-213ENST00000612417 RFX4Q33E94 735 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 ZDHHC20Q5W0Z9 365 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 GTF2IRD2BQ6EKJ0 949 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 VITQ6UXI7 678 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 GTF2IRD2Q86UP8 949 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 PHACTR4Q8IZ21 702 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 CLHC1Q8NHS4 586 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 TBC1D15Q8TC07 691 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 FRS2Q8WU20 508 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 RAB2BQ8WUD1 216 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 SELENOMQ8WWX9 145 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 PPP1R14BQ96C90 147 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 FAM120BQ96EK7 910 aaKnown RBP14.26□□□□□ -0.13
CDH1-213ENST00000612417 CMTM7Q96FZ5 175 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 BRD9Q9H8M2 597 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 GPN2Q9H9Y4 310 aaPredicted RBP14.26□□□□□ -0.13
CDH1-213ENST00000612417 SLC27A6Q9Y2P4 619 aa14.26□□□□□ -0.13
CDH1-213ENST00000612417 KIF26AQ9ULI4 1882 aaPredicted RBP14.25□□□□□ -0.13
CDH1-213ENST00000612417 TPD52L2O43399 206 aaKnown RBP14.25□□□□□ -0.13
CDH1-213ENST00000612417 LEFTY1O75610 366 aa14.25□□□□□ -0.13
CDH1-213ENST00000612417 OR56A5P0C7T3 313 aa14.25□□□□□ -0.13
CDH1-213ENST00000612417 CCNA2P20248 432 aa14.25□□□□□ -0.13
CDH1-213ENST00000612417 MESP2Q0VG99 397 aa14.25□□□□□ -0.13
CDH1-213ENST00000612417 SP140Q13342 867 aa14.25□□□□□ -0.13
CDH1-213ENST00000612417 TOP3AQ13472 1001 aaPredicted RBP14.25□□□□□ -0.13
CDH1-213ENST00000612417 IL18R1Q13478 541 aa14.25□□□□□ -0.13
CDH1-213ENST00000612417 ATP13A5Q4VNC0 1218 aa14.25□□□□□ -0.13
CDH1-213ENST00000612417 FNDC3BQ53EP0 1204 aaKnown RBP14.25□□□□□ -0.13
CDH1-213ENST00000612417 SPESP1Q6UW49 350 aa14.25□□□□□ -0.13
CDH1-213ENST00000612417 UBE2R2Q712K3 238 aaPredicted RBP14.25□□□□□ -0.13
CDH1-213ENST00000612417 HIPK1Q86Z02 1210 aa14.25□□□□□ -0.13
CDH1-213ENST00000612417 ETFBKMTQ8IXQ9 262 aa14.25□□□□□ -0.13
CDH1-213ENST00000612417 CHPFQ8IZ52 775 aa14.25□□□□□ -0.13
CDH1-213ENST00000612417 SPARTQ8N0X7 666 aa14.25□□□□□ -0.13
CDH1-213ENST00000612417 NETO1Q8TDF5 533 aa14.25□□□□□ -0.13
CDH1-213ENST00000612417 ASB11Q8WXH4 323 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms