RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 ISLR2Q6UXK2 745 aa16.94■□□□□ 0.3
SSBP1-215ENST00000612337 ZNF662Q6ZS27 426 aa16.94■□□□□ 0.3
SSBP1-215ENST00000612337 PRSS58Q8IYP2 241 aa16.94■□□□□ 0.3
SSBP1-215ENST00000612337 SMPDL3AQ92484 453 aa16.94■□□□□ 0.3
SSBP1-215ENST00000612337 MVB12AQ96EY5 273 aa16.94■□□□□ 0.3
SSBP1-215ENST00000612337 CABS1Q96KC9 395 aa16.94■□□□□ 0.3
SSBP1-215ENST00000612337 CNDP1Q96KN2 507 aa16.94■□□□□ 0.3
SSBP1-215ENST00000612337 PLCD4Q9BRC7 762 aa16.94■□□□□ 0.3
SSBP1-215ENST00000612337 MESP1Q9BRJ9 268 aa16.94■□□□□ 0.3
SSBP1-215ENST00000612337 MRPS30Q9NP92 439 aaKnown RBP16.94■□□□□ 0.3
SSBP1-215ENST00000612337 FAM114A2Q9NRY5 505 aa16.94■□□□□ 0.3
SSBP1-215ENST00000612337 HOMER3Q9NSC5 361 aa16.94■□□□□ 0.3
SSBP1-215ENST00000612337 STOX2Q9P2F5 926 aaPredicted RBP16.94■□□□□ 0.3
SSBP1-215ENST00000612337 GALPQ9UBC7 116 aa16.94■□□□□ 0.3
SSBP1-215ENST00000612337 CDC14AQ9UNH5 594 aa16.94■□□□□ 0.3
SSBP1-215ENST00000612337 VPS9D1Q9Y2B5 631 aa16.94■□□□□ 0.3
SSBP1-215ENST00000612337 DIDO1Q9BTC0 2240 aaKnown RBP16.94■□□□□ 0.3
SSBP1-215ENST00000612337 LRBAP50851 2863 aa16.94■□□□□ 0.3
SSBP1-215ENST00000612337 E5RI56 91 aa16.93■□□□□ 0.3
SSBP1-215ENST00000612337 MAP2K7O14733 419 aa16.93■□□□□ 0.3
SSBP1-215ENST00000612337 PKMP14618 531 aaKnown RBP16.93■□□□□ 0.3
SSBP1-215ENST00000612337 PAMP19021 973 aa16.93■□□□□ 0.3
SSBP1-215ENST00000612337 RPA3P35244 121 aaPredicted RBP16.93■□□□□ 0.3
SSBP1-215ENST00000612337 HSD17B2P37059 387 aa16.93■□□□□ 0.3
SSBP1-215ENST00000612337 MAGEA6P43360 314 aa16.93■□□□□ 0.3
SSBP1-215ENST00000612337 SARNPP82979 210 aaKnown RBP16.93■□□□□ 0.3
SSBP1-215ENST00000612337 MFAP5Q13361 173 aa16.93■□□□□ 0.3
SSBP1-215ENST00000612337 KCNJ11Q14654 390 aa16.93■□□□□ 0.3
SSBP1-215ENST00000612337 KLHL38Q2WGJ6 581 aa16.93■□□□□ 0.3
SSBP1-215ENST00000612337 VWA2Q5GFL6 755 aa16.93■□□□□ 0.3
SSBP1-215ENST00000612337 SUSD1Q6UWL2 747 aa16.93■□□□□ 0.3
SSBP1-215ENST00000612337 CENPUQ71F23 418 aa16.93■□□□□ 0.3
SSBP1-215ENST00000612337 PAQR7Q86WK9 346 aa16.93■□□□□ 0.3
SSBP1-215ENST00000612337 CILP2Q8IUL8 1156 aa16.93■□□□□ 0.3
SSBP1-215ENST00000612337 GRHL3Q8TE85 626 aa16.93■□□□□ 0.3
SSBP1-215ENST00000612337 LMF1Q96S06 567 aa16.93■□□□□ 0.3
SSBP1-215ENST00000612337 ZNF160Q9HCG1 818 aa16.93■□□□□ 0.3
SSBP1-215ENST00000612337 LZTFL1Q9NQ48 299 aa16.93■□□□□ 0.3
SSBP1-215ENST00000612337 INTS10Q9NVR2 710 aaKnown RBP16.93■□□□□ 0.3
SSBP1-215ENST00000612337 CREBBPQ92793 2442 aa16.93■□□□□ 0.3
SSBP1-215ENST00000612337 ZGRF1Q86YA3 2104 aa16.93■□□□□ 0.3
SSBP1-215ENST00000612337 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.92■□□□□ 0.3
SSBP1-215ENST00000612337 IGKV1-8A0A0C4DH67 115 aa16.92■□□□□ 0.3
SSBP1-215ENST00000612337 ZNF839A8K0R7 811 aa16.92■□□□□ 0.3
SSBP1-215ENST00000612337 E2F3O00716 465 aa16.92■□□□□ 0.3
SSBP1-215ENST00000612337 PRPF4O43172 522 aaKnown RBP eCLIP16.92■□□□□ 0.3
SSBP1-215ENST00000612337 CEP104O60308 925 aa16.92■□□□□ 0.3
SSBP1-215ENST00000612337 AVILO75366 819 aa16.92■□□□□ 0.3
SSBP1-215ENST00000612337 USP1O94782 785 aa16.92■□□□□ 0.3
SSBP1-215ENST00000612337 KLHL18O94889 574 aa16.92■□□□□ 0.3
SSBP1-215ENST00000612337 CATP04040 527 aaKnown RBP16.92■□□□□ 0.3
SSBP1-215ENST00000612337 EDN3P14138 238 aa16.92■□□□□ 0.3
SSBP1-215ENST00000612337 COL8A1P27658 744 aa16.92■□□□□ 0.3
SSBP1-215ENST00000612337 PNLIPRP1P54315 467 aa16.92■□□□□ 0.3
SSBP1-215ENST00000612337 CDC16Q13042 620 aa16.92■□□□□ 0.3
SSBP1-215ENST00000612337 DSG2Q14126 1118 aa16.92■□□□□ 0.3
SSBP1-215ENST00000612337 NEPROQ6NW34 567 aa16.92■□□□□ 0.3
SSBP1-215ENST00000612337 LINC00696Q6ZRV3 163 aa16.92■□□□□ 0.3
SSBP1-215ENST00000612337 NEK10Q6ZWH5 1172 aa16.92■□□□□ 0.3
SSBP1-215ENST00000612337 NDUFAF7Q7L592 441 aa16.92■□□□□ 0.3
SSBP1-215ENST00000612337 LAPTM4BQ86VI4 370 aa16.92■□□□□ 0.3
SSBP1-215ENST00000612337 KBTBD2Q8IY47 623 aa16.92■□□□□ 0.3
SSBP1-215ENST00000612337 CSNK1A1LQ8N752 337 aa16.92■□□□□ 0.3
SSBP1-215ENST00000612337 TRIM58Q8NG06 486 aa16.92■□□□□ 0.3
SSBP1-215ENST00000612337 FAR1Q8WVX9 515 aa16.92■□□□□ 0.3
SSBP1-215ENST00000612337 C8orf44Q96CB5 159 aa16.92■□□□□ 0.3
SSBP1-215ENST00000612337 PKP4Q99569 1192 aa16.92■□□□□ 0.3
SSBP1-215ENST00000612337 UTP6Q9NYH9 597 aaKnown RBP16.92■□□□□ 0.3
SSBP1-215ENST00000612337 RUVBL1Q9Y265 456 aaKnown RBP16.92■□□□□ 0.3
SSBP1-215ENST00000612337 A0A1W2PQ72 361 aa16.91■□□□□ 0.3
SSBP1-215ENST00000612337 CCNDBP1O95273 360 aa16.91■□□□□ 0.3
SSBP1-215ENST00000612337 CCDC175P0C221 793 aa16.91■□□□□ 0.3
SSBP1-215ENST00000612337 COX6A1P12074 109 aa16.91■□□□□ 0.3
SSBP1-215ENST00000612337 FDXRP22570 491 aa16.91■□□□□ 0.3
SSBP1-215ENST00000612337 DCTP40126 519 aa16.91■□□□□ 0.3
SSBP1-215ENST00000612337 SLC26A3P40879 764 aa16.91■□□□□ 0.3
SSBP1-215ENST00000612337 CLCN7P51798 805 aa16.91■□□□□ 0.3
SSBP1-215ENST00000612337 TERF1P54274 439 aa16.91■□□□□ 0.3
SSBP1-215ENST00000612337 RELAQ04206 551 aa16.91■□□□□ 0.3
SSBP1-215ENST00000612337 PRDX1Q06830 199 aaKnown RBP16.91■□□□□ 0.3
SSBP1-215ENST00000612337 TRIP13Q15645 432 aaPredicted RBP16.91■□□□□ 0.3
SSBP1-215ENST00000612337 KCTD19Q17RG1 926 aaPredicted RBP16.91■□□□□ 0.3
SSBP1-215ENST00000612337 HKDC1Q2TB90 917 aa16.91■□□□□ 0.3
SSBP1-215ENST00000612337 TTLL9Q3SXZ7 439 aa16.91■□□□□ 0.3
SSBP1-215ENST00000612337 GARNL3Q5VVW2 1013 aa16.91■□□□□ 0.3
SSBP1-215ENST00000612337 ICE2Q659A1 982 aa16.91■□□□□ 0.3
SSBP1-215ENST00000612337 ZNF787Q6DD87 383 aa16.91■□□□□ 0.3
SSBP1-215ENST00000612337 ZNF425Q6IV72 752 aa16.91■□□□□ 0.3
SSBP1-215ENST00000612337 CASC4Q6P4E1 433 aa16.91■□□□□ 0.3
SSBP1-215ENST00000612337 CAND1Q86VP6 1230 aaKnown RBP16.91■□□□□ 0.3
SSBP1-215ENST00000612337 REXO1L1PQ8IX06 675 aa16.91■□□□□ 0.3
SSBP1-215ENST00000612337 PRELID2Q8N945 189 aa16.91■□□□□ 0.3
SSBP1-215ENST00000612337 FBXO15Q8NCQ5 510 aaPredicted RBP16.91■□□□□ 0.3
SSBP1-215ENST00000612337 OR2A5Q96R48 311 aa16.91■□□□□ 0.3
SSBP1-215ENST00000612337 SYNPO2LQ9H987 977 aa16.91■□□□□ 0.3
SSBP1-215ENST00000612337 C14orf105Q9NVL8 296 aa16.91■□□□□ 0.3
SSBP1-215ENST00000612337 KLHL42Q9P2K6 505 aa16.91■□□□□ 0.3
SSBP1-215ENST00000612337 TRPC4Q9UBN4 977 aa16.91■□□□□ 0.3
SSBP1-215ENST00000612337 TAC3Q9UHF0 121 aa16.91■□□□□ 0.3
SSBP1-215ENST00000612337 NSG1A0A0A6YYJ2 146 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms