RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, human

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-223	ENST00000611614	MTPN	P58546	118 aa		13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	C2orf27A	Q580R0	203 aa		13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	TTC23L	Q6PF05	361 aa		13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	LIPI	Q6XZB0	460 aa		13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	DCDC5	Q6ZRR9	648 aa		13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	TRMT11	Q7Z4G4	463 aa	Known RBP	13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	CHPT1	Q8WUD6	406 aa		13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	TRUB1	Q8WWH5	349 aa	Known RBP	13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	DNASE1L2	Q92874	299 aa		13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	ARRDC3	Q96B67	414 aa		13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	BDH2	Q9BUT1	245 aa		13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	FARSB	Q9NSD9	589 aa	Known RBP	13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	ZFC3H1	O60293	1989 aa	Known RBP	13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	REV3L	O60673	3130 aa		13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614		A0A1W2PPW3	197 aa		13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614		K7EQS6	105 aa		13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	SOX1	O00570	391 aa	Predicted RBP	13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	LZTS3	O60299	673 aa	Predicted RBP	13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	OCM2	P0CE71	109 aa		13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	OCM	P0CE72	109 aa	Predicted RBP	13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	DRD1	P21728	446 aa		13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	NTSR1	P30989	418 aa		13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	IMPG1	Q17R60	797 aa		13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	CACHD1	Q5VU97	1274 aa		13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	ANKRD26P1	Q6NSI1	321 aa		13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	MBOAT1	Q6ZNC8	495 aa		13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	RFLNA	Q6ZTI6	216 aa		13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	FKBP9P1	Q75LS8	142 aa		13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	RAVER1	Q8IY67	606 aa	Known RBP	13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	NRSN1	Q8IZ57	195 aa		13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	AADAT	Q8N5Z0	425 aa		13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	GLB1L3	Q8NCI6	653 aa	Predicted RBP	13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	SLC13A3	Q8WWT9	602 aa		13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	HLA-C	Q95604	372 aa		13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	SCAMP4	Q969E2	229 aa		13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	SEPHS2	Q99611	448 aa		13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	CHID1	Q9BWS9	393 aa		13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	HDAC8	Q9BY41	377 aa		13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	LRTM1	Q9HBL6	345 aa		13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	TDRKH	Q9Y2W6	561 aa	Known RBP	13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	COQ6	Q9Y2Z9	468 aa		13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	KIAA1549L	Q6ZVL6	1849 aa		13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	TMEM221	A6NGB7	291 aa		13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	EIF3F	O00303	357 aa	Predicted RBP	13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	ZBTB11	O95625	1053 aa	Predicted RBP	13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	ADH1B	P00325	375 aa		13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	ALB	P02768	609 aa		13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	KIR2DL1	P43626	348 aa	Predicted RBP	13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	B4GALNT1	Q00973	533 aa		13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	HMGCS1	Q01581	520 aa		13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	NFATC3	Q12968	1075 aa		13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	CAMK2G	Q13555	558 aa	Predicted RBP	13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	PTGR1	Q14914	329 aa		13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	PON2	Q15165	354 aa		13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	SGO1	Q5FBB7	561 aa		13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	BROX	Q5VW32	411 aa		13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	C16orf87	Q6PH81	154 aa		13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	RIMKLA	Q8IXN7	391 aa		13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	RGL4	Q8IZJ4	473 aa		13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	LIX1	Q8N485	282 aa		13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	DTWD1	Q8N5C7	304 aa		13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	TRAM1L1	Q8N609	369 aa		13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	RAB2B	Q8WUD1	216 aa		13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	USP7	Q93009	1102 aa		13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	AP2M1	Q96CW1	435 aa		13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	RIOK2	Q9BVS4	552 aa	Known RBP	13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	DPY30	Q9C005	99 aa		13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	IFT80	Q9P2H3	777 aa	Predicted RBP	13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	HCN2	Q9UL51	889 aa		13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	ITM2B	Q9Y287	266 aa		13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	WDR37	Q9Y2I8	494 aa		13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	NEUROG3	Q9Y4Z2	214 aa		13.47	□□□□□ -0.25
COPS7B-223	ENST00000611614	SEC22B	O75396	215 aa		13.46	□□□□□ -0.25
COPS7B-223	ENST00000611614	CLDN9	O95484	217 aa		13.46	□□□□□ -0.25
COPS7B-223	ENST00000611614	IL6	P05231	212 aa		13.46	□□□□□ -0.25
COPS7B-223	ENST00000611614	ANXA6	P08133	673 aa		13.46	□□□□□ -0.25
COPS7B-223	ENST00000611614	OR56A5	P0C7T3	313 aa		13.46	□□□□□ -0.25
COPS7B-223	ENST00000611614	GGT1	P19440	569 aa		13.46	□□□□□ -0.25
COPS7B-223	ENST00000611614	MAP4	P27816	1152 aa	Known RBP	13.46	□□□□□ -0.25
COPS7B-223	ENST00000611614	CCR7	P32248	378 aa		13.46	□□□□□ -0.25
COPS7B-223	ENST00000611614	METAP1	P53582	386 aa		13.46	□□□□□ -0.25
COPS7B-223	ENST00000611614	RELA	Q04206	551 aa		13.46	□□□□□ -0.25
COPS7B-223	ENST00000611614	ENPP2	Q13822	863 aa		13.46	□□□□□ -0.25
COPS7B-223	ENST00000611614	CST6	Q15828	149 aa		13.46	□□□□□ -0.25
COPS7B-223	ENST00000611614	RBM48	Q5RL73	367 aa	Known RBP	13.46	□□□□□ -0.25
COPS7B-223	ENST00000611614	NIPAL1	Q6NVV3	410 aa		13.46	□□□□□ -0.25
COPS7B-223	ENST00000611614	CXorf40A	Q8TE69	158 aa		13.46	□□□□□ -0.25
COPS7B-223	ENST00000611614	GTF2H4	Q92759	462 aa		13.46	□□□□□ -0.25
COPS7B-223	ENST00000611614	RNF145	Q96MT1	663 aa		13.46	□□□□□ -0.25
COPS7B-223	ENST00000611614	ZNF583	Q96ND8	569 aa		13.46	□□□□□ -0.25
COPS7B-223	ENST00000611614	RDH12	Q96NR8	316 aa		13.46	□□□□□ -0.25
COPS7B-223	ENST00000611614	RSPH9	Q9H1X1	276 aa	Predicted RBP	13.46	□□□□□ -0.25
COPS7B-223	ENST00000611614	GPN2	Q9H9Y4	310 aa	Predicted RBP	13.46	□□□□□ -0.25
COPS7B-223	ENST00000611614	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	13.46	□□□□□ -0.25
COPS7B-223	ENST00000611614	IGLV3-16	A0A075B6K0	115 aa		13.46	□□□□□ -0.26
COPS7B-223	ENST00000611614	DFNA5	O60443	496 aa		13.46	□□□□□ -0.26
COPS7B-223	ENST00000611614	SEC14L2	O76054	403 aa		13.46	□□□□□ -0.26
COPS7B-223	ENST00000611614	KRT6A	P02538	564 aa		13.46	□□□□□ -0.26
COPS7B-223	ENST00000611614	KRT6B	P04259	564 aa		13.46	□□□□□ -0.26
COPS7B-223	ENST00000611614	GGT5	P36269	586 aa		13.46	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 116 ms