RNA–Protein interactions for RNA: ENST00000608674.5

TOM1-218, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 541 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-218ENST00000608674 KCNF1Q9H3M0 494 aa12.64□□□□□ -0.39
TOM1-218ENST00000608674 SOX17Q9H6I2 414 aaPredicted RBP12.64□□□□□ -0.39
TOM1-218ENST00000608674 ZNF304Q9HCX3 659 aa12.64□□□□□ -0.39
TOM1-218ENST00000608674 SLC6A20Q9NP91 592 aa12.64□□□□□ -0.39
TOM1-218ENST00000608674 MAP10Q9P2G4 905 aa12.64□□□□□ -0.39
TOM1-218ENST00000608674 CTSFQ9UBX1 484 aa12.64□□□□□ -0.39
TOM1-218ENST00000608674 PCYOX1Q9UHG3 505 aa12.64□□□□□ -0.39
TOM1-218ENST00000608674 FBXL4Q9UKA2 621 aa12.64□□□□□ -0.39
TOM1-218ENST00000608674 FER1L5A0AVI2 2057 aa12.63□□□□□ -0.39
TOM1-218ENST00000608674 E7ENX8 843 aa12.63□□□□□ -0.39
TOM1-218ENST00000608674 H0YGG7 62 aa12.63□□□□□ -0.39
TOM1-218ENST00000608674 GFYI3L273 518 aa12.63□□□□□ -0.39
TOM1-218ENST00000608674 SMAPO00193 183 aa12.63□□□□□ -0.39
TOM1-218ENST00000608674 EIF3FO00303 357 aaPredicted RBP12.63□□□□□ -0.39
TOM1-218ENST00000608674 NRP2O60462 931 aa12.63□□□□□ -0.39
TOM1-218ENST00000608674 IPO13O94829 963 aaKnown RBP12.63□□□□□ -0.39
TOM1-218ENST00000608674 ITGA3P26006 1051 aa12.63□□□□□ -0.39
TOM1-218ENST00000608674 VARSP26640 1264 aaKnown RBP12.63□□□□□ -0.39
TOM1-218ENST00000608674 SKIV2L2P42285 1042 aaKnown RBP12.63□□□□□ -0.39
TOM1-218ENST00000608674 ARF3P61204 181 aaPredicted RBP12.63□□□□□ -0.39
TOM1-218ENST00000608674 GNG11P61952 73 aa12.63□□□□□ -0.39
TOM1-218ENST00000608674 YBX1P67809 324 aaKnown RBP12.63□□□□□ -0.39
TOM1-218ENST00000608674 TAP2Q03519 686 aa12.63□□□□□ -0.39
TOM1-218ENST00000608674 DHX9Q08211 1270 aaKnown RBP12.63□□□□□ -0.39
TOM1-218ENST00000608674 AIMP2Q13155 320 aaKnown RBP12.63□□□□□ -0.39
TOM1-218ENST00000608674 SPANXN3Q5MJ09 141 aa12.63□□□□□ -0.39
TOM1-218ENST00000608674 LRRC8EQ6NSJ5 796 aa12.63□□□□□ -0.39
TOM1-218ENST00000608674 SHISA6Q6ZSJ9 500 aa12.63□□□□□ -0.39
TOM1-218ENST00000608674 COX15Q7KZN9 410 aa12.63□□□□□ -0.39
TOM1-218ENST00000608674 PIWIL4Q7Z3Z4 852 aaKnown RBP12.63□□□□□ -0.39
TOM1-218ENST00000608674 PAQR7Q86WK9 346 aa12.63□□□□□ -0.39
TOM1-218ENST00000608674 CPNE9Q8IYJ1 553 aa12.63□□□□□ -0.39
TOM1-218ENST00000608674 PDIK1LQ8N165 341 aa12.63□□□□□ -0.39
TOM1-218ENST00000608674 CSNK1A1LQ8N752 337 aa12.63□□□□□ -0.39
TOM1-218ENST00000608674 C2CD4AQ8NCU7 369 aaPredicted RBP12.63□□□□□ -0.39
TOM1-218ENST00000608674 PPFIBP2Q8ND30 876 aa12.63□□□□□ -0.39
TOM1-218ENST00000608674 MCOLN3Q8TDD5 553 aa12.63□□□□□ -0.39
TOM1-218ENST00000608674 ZNF480Q8WV37 535 aa12.63□□□□□ -0.39
TOM1-218ENST00000608674 SLCO2A1Q92959 643 aa12.63□□□□□ -0.39
TOM1-218ENST00000608674 PNPLA2Q96AD5 504 aa12.63□□□□□ -0.39
TOM1-218ENST00000608674 RUNDC3BQ96NL0 473 aa12.63□□□□□ -0.39
TOM1-218ENST00000608674 YIPF2Q9BWQ6 316 aa12.63□□□□□ -0.39
TOM1-218ENST00000608674 PPANQ9NQ55 473 aaKnown RBP12.63□□□□□ -0.39
TOM1-218ENST00000608674 SEMA3GQ9NS98 782 aa12.63□□□□□ -0.39
TOM1-218ENST00000608674 TAS2R13Q9NYV9 303 aa12.63□□□□□ -0.39
TOM1-218ENST00000608674 LUZP4Q9P127 313 aa12.63□□□□□ -0.39
TOM1-218ENST00000608674 ZNF282Q9UDV7 671 aaPredicted RBP12.63□□□□□ -0.39
TOM1-218ENST00000608674 CDC14AQ9UNH5 594 aa12.63□□□□□ -0.39
TOM1-218ENST00000608674 MED16Q9Y2X0 877 aa12.63□□□□□ -0.39
TOM1-218ENST00000608674 RELNP78509 3460 aa12.63□□□□□ -0.39
TOM1-218ENST00000608674 ANKRD12Q6UB98 2062 aa12.63□□□□□ -0.39
TOM1-218ENST00000608674 PABPN1LA6NDY0 278 aaKnown RBP12.62□□□□□ -0.39
TOM1-218ENST00000608674 TXNDC9O14530 226 aa12.62□□□□□ -0.39
TOM1-218ENST00000608674 PRPF4O43172 522 aaKnown RBP eCLIP12.62□□□□□ -0.39
TOM1-218ENST00000608674 BANF1O75531 89 aa12.62□□□□□ -0.39
TOM1-218ENST00000608674 SORBS2O94875 1100 aaKnown RBP12.62□□□□□ -0.39
TOM1-218ENST00000608674 EZRP15311 586 aaKnown RBP12.62□□□□□ -0.39
TOM1-218ENST00000608674 FBLP22087 321 aaKnown RBP12.62□□□□□ -0.39
TOM1-218ENST00000608674 CARSP49589 748 aaKnown RBP12.62□□□□□ -0.39
TOM1-218ENST00000608674 INPP5JQ15735 1006 aaPredicted RBP12.62□□□□□ -0.39
TOM1-218ENST00000608674 PRTGQ2VWP7 1150 aa12.62□□□□□ -0.39
TOM1-218ENST00000608674 PRAMEF13Q5VWM6 474 aa12.62□□□□□ -0.39
TOM1-218ENST00000608674 SLC6A19Q695T7 634 aa12.62□□□□□ -0.39
TOM1-218ENST00000608674 CYHR1Q6ZMK1 362 aa12.62□□□□□ -0.39
TOM1-218ENST00000608674 KIAA0408Q6ZU52 694 aa12.62□□□□□ -0.39
TOM1-218ENST00000608674 SYDE1Q6ZW31 735 aaPredicted RBP12.62□□□□□ -0.39
TOM1-218ENST00000608674 KLHL7Q8IXQ5 586 aa12.62□□□□□ -0.39
TOM1-218ENST00000608674 PRSS58Q8IYP2 241 aa12.62□□□□□ -0.39
TOM1-218ENST00000608674 ZADH2Q8N4Q0 377 aa12.62□□□□□ -0.39
TOM1-218ENST00000608674 RBMXL3Q8N7X1 1067 aaKnown RBP12.62□□□□□ -0.39
TOM1-218ENST00000608674 GALNT11Q8NCW6 608 aa12.62□□□□□ -0.39
TOM1-218ENST00000608674 MIEF2Q96C03 454 aa12.62□□□□□ -0.39
TOM1-218ENST00000608674 NDNQ99608 321 aa12.62□□□□□ -0.39
TOM1-218ENST00000608674 SPSB2Q99619 263 aa12.62□□□□□ -0.39
TOM1-218ENST00000608674 CRB3Q9BUF7 120 aa12.62□□□□□ -0.39
TOM1-218ENST00000608674 STOX2Q9P2F5 926 aaPredicted RBP12.62□□□□□ -0.39
TOM1-218ENST00000608674 MAP4K5Q9Y4K4 846 aa12.62□□□□□ -0.39
TOM1-218ENST00000608674 TNRC6AQ8NDV7 1962 aaKnown RBP12.61□□□□□ -0.39
TOM1-218ENST00000608674 IGKV1-8A0A0C4DH67 115 aa12.61□□□□□ -0.39
TOM1-218ENST00000608674 VSTM2BA6NLU5 285 aa12.61□□□□□ -0.39
TOM1-218ENST00000608674 MASP2O00187 686 aa12.61□□□□□ -0.39
TOM1-218ENST00000608674 SOCS6O14544 535 aa12.61□□□□□ -0.39
TOM1-218ENST00000608674 C8GP07360 202 aa12.61□□□□□ -0.39
TOM1-218ENST00000608674 ANXA5P08758 320 aa12.61□□□□□ -0.39
TOM1-218ENST00000608674 ZGLP1P0C6A0 271 aa12.61□□□□□ -0.39
TOM1-218ENST00000608674 HRH2P25021 359 aa12.61□□□□□ -0.39
TOM1-218ENST00000608674 PAFAH1B1P43034 410 aa12.61□□□□□ -0.39
TOM1-218ENST00000608674 EMP3P54852 163 aa12.61□□□□□ -0.39
TOM1-218ENST00000608674 SOX8P57073 446 aa12.61□□□□□ -0.39
TOM1-218ENST00000608674 DR1Q01658 176 aa12.61□□□□□ -0.39
TOM1-218ENST00000608674 KLC1Q07866 573 aa12.61□□□□□ -0.39
TOM1-218ENST00000608674 MORF4L2Q15014 288 aa12.61□□□□□ -0.39
TOM1-218ENST00000608674 TUBB8Q3ZCM7 444 aa12.61□□□□□ -0.39
TOM1-218ENST00000608674 MSS51Q4VC12 460 aa12.61□□□□□ -0.39
TOM1-218ENST00000608674 GARNL3Q5VVW2 1013 aa12.61□□□□□ -0.39
TOM1-218ENST00000608674 KIRREL2Q6UWL6 708 aa12.61□□□□□ -0.39
TOM1-218ENST00000608674 TMEM151BQ8IW70 566 aa12.61□□□□□ -0.39
TOM1-218ENST00000608674 MYO1HQ8N1T3 1032 aa12.61□□□□□ -0.39
TOM1-218ENST00000608674 FAM26EQ8N5C1 309 aa12.61□□□□□ -0.39
TOM1-218ENST00000608674 DTWD1Q8N5C7 304 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms