RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 CAPZA1P52907 286 aa3.43□□□□□ -1.86
RNU6-88P-201ENST00000606801 RBP5P82980 135 aa3.43□□□□□ -1.86
RNU6-88P-201ENST00000606801 HECTD3Q5T447 861 aa3.43□□□□□ -1.86
RNU6-88P-201ENST00000606801 ARHGEF16Q5VV41 709 aa3.43□□□□□ -1.86
RNU6-88P-201ENST00000606801 FAM166AQ6J272 317 aa3.43□□□□□ -1.86
RNU6-88P-201ENST00000606801 PSRC1Q6PGN9 363 aaPredicted RBP3.43□□□□□ -1.86
RNU6-88P-201ENST00000606801 SHQ1Q6PI26 577 aaKnown RBP3.43□□□□□ -1.86
RNU6-88P-201ENST00000606801 BHLHB9Q6PI77 547 aa3.43□□□□□ -1.86
RNU6-88P-201ENST00000606801 SLC25A47Q6Q0C1 308 aa3.43□□□□□ -1.86
RNU6-88P-201ENST00000606801 ENPP7Q6UWV6 458 aa3.43□□□□□ -1.86
RNU6-88P-201ENST00000606801 BTN2A1Q7KYR7 527 aa3.43□□□□□ -1.86
RNU6-88P-201ENST00000606801 NRARPQ7Z6K4 114 aa3.43□□□□□ -1.86
RNU6-88P-201ENST00000606801 ANKRD23Q86SG2 305 aa3.43□□□□□ -1.86
RNU6-88P-201ENST00000606801 NDUFAF2Q8N183 169 aa3.43□□□□□ -1.86
RNU6-88P-201ENST00000606801 OR1L3Q8NH93 324 aa3.43□□□□□ -1.86
RNU6-88P-201ENST00000606801 C9orf43Q8TAL5 461 aaPredicted RBP3.43□□□□□ -1.86
RNU6-88P-201ENST00000606801 SETD6Q8TBK2 473 aa3.43□□□□□ -1.86
RNU6-88P-201ENST00000606801 DEPDC1BQ8WUY9 529 aa3.43□□□□□ -1.86
RNU6-88P-201ENST00000606801 DYRK2Q92630 601 aa3.43□□□□□ -1.86
RNU6-88P-201ENST00000606801 P2RX5Q93086 422 aa3.43□□□□□ -1.86
RNU6-88P-201ENST00000606801 LRR1Q96L50 414 aa3.43□□□□□ -1.86
RNU6-88P-201ENST00000606801 SPAG5Q96R06 1193 aa3.43□□□□□ -1.86
RNU6-88P-201ENST00000606801 PI4K2AQ9BTU6 479 aa3.43□□□□□ -1.86
RNU6-88P-201ENST00000606801 GTPBP2Q9BX10 602 aaKnown RBP3.43□□□□□ -1.86
RNU6-88P-201ENST00000606801 ACTL8Q9H568 366 aa3.43□□□□□ -1.86
RNU6-88P-201ENST00000606801 MRGBPQ9NV56 204 aa3.43□□□□□ -1.86
RNU6-88P-201ENST00000606801 R4GN57 208 aa3.43□□□□□ -1.86
RNU6-88P-201ENST00000606801 SNURFLB1AK76 121 aa3.42□□□□□ -1.86
RNU6-88P-201ENST00000606801 ZG16O60844 167 aa3.42□□□□□ -1.86
RNU6-88P-201ENST00000606801 FCGR3BO75015 233 aa3.42□□□□□ -1.86
RNU6-88P-201ENST00000606801 RPS6KA5O75582 802 aa3.42□□□□□ -1.86
RNU6-88P-201ENST00000606801 CDC123O75794 336 aaPredicted RBP3.42□□□□□ -1.86
RNU6-88P-201ENST00000606801 CD59P13987 128 aa3.42□□□□□ -1.86
RNU6-88P-201ENST00000606801 CEBPBP17676 345 aa3.42□□□□□ -1.86
RNU6-88P-201ENST00000606801 CDX1P47902 265 aaPredicted RBP3.42□□□□□ -1.86
RNU6-88P-201ENST00000606801 CSNK2BP67870 215 aa3.42□□□□□ -1.86
RNU6-88P-201ENST00000606801 ILF2Q12905 390 aaKnown RBP3.42□□□□□ -1.86
RNU6-88P-201ENST00000606801 TEAD2Q15562 447 aa3.42□□□□□ -1.86
RNU6-88P-201ENST00000606801 ADAMTSL4-AS1Q5T5F5 129 aa3.42□□□□□ -1.86
RNU6-88P-201ENST00000606801 SHEQ5VZ18 495 aa3.42□□□□□ -1.86
RNU6-88P-201ENST00000606801 LYSMD4Q5XG99 296 aa3.42□□□□□ -1.86
RNU6-88P-201ENST00000606801 CYB5D1Q6P9G0 228 aa3.42□□□□□ -1.86
RNU6-88P-201ENST00000606801 BTNL8Q6UX41 500 aa3.42□□□□□ -1.86
RNU6-88P-201ENST00000606801 LACC1Q8IV20 430 aa3.42□□□□□ -1.86
RNU6-88P-201ENST00000606801 OR8H3Q8N146 312 aa3.42□□□□□ -1.86
RNU6-88P-201ENST00000606801 TMEM178AQ8NBL3 297 aa3.42□□□□□ -1.86
RNU6-88P-201ENST00000606801 APOBEC4Q8WW27 367 aaKnown RBP3.42□□□□□ -1.86
RNU6-88P-201ENST00000606801 PIK3R3Q92569 461 aa3.42□□□□□ -1.86
RNU6-88P-201ENST00000606801 AZIN2Q96A70 460 aa3.42□□□□□ -1.86
RNU6-88P-201ENST00000606801 C4orf45Q96LM5 186 aa3.42□□□□□ -1.86
RNU6-88P-201ENST00000606801 GDAP1L1Q96MZ0 367 aa3.42□□□□□ -1.86
RNU6-88P-201ENST00000606801 GBP5Q96PP8 586 aa3.42□□□□□ -1.86
RNU6-88P-201ENST00000606801 DUX3Q96PT4 197 aa3.42□□□□□ -1.86
RNU6-88P-201ENST00000606801 ADPGKQ9BRR6 497 aa3.42□□□□□ -1.86
RNU6-88P-201ENST00000606801 INPP5KQ9BT40 448 aa3.42□□□□□ -1.86
RNU6-88P-201ENST00000606801 RBM4Q9BWF3 364 aaKnown RBP3.42□□□□□ -1.86
RNU6-88P-201ENST00000606801 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.42□□□□□ -1.86
RNU6-88P-201ENST00000606801 GRID1Q9ULK0 1009 aa3.42□□□□□ -1.86
RNU6-88P-201ENST00000606801 CHKBQ9Y259 395 aa3.42□□□□□ -1.86
RNU6-88P-201ENST00000606801 KCNK7Q9Y2U2 307 aa3.42□□□□□ -1.86
RNU6-88P-201ENST00000606801 TDRD15B5MCY1 1934 aaKnown RBP3.42□□□□□ -1.86
RNU6-88P-201ENST00000606801 A0A087WW49 117 aa3.41□□□□□ -1.86
RNU6-88P-201ENST00000606801 A0A1W2PPW3 197 aa3.41□□□□□ -1.86
RNU6-88P-201ENST00000606801 ARHGEF37A1IGU5 675 aa3.41□□□□□ -1.86
RNU6-88P-201ENST00000606801 MTMR11A4FU01 709 aa3.41□□□□□ -1.86
RNU6-88P-201ENST00000606801 C17orf105B2RV13 164 aa3.41□□□□□ -1.86
RNU6-88P-201ENST00000606801 SELENOFO60613 162 aa3.41□□□□□ -1.86
RNU6-88P-201ENST00000606801 ZNF821O75541 412 aaPredicted RBP3.41□□□□□ -1.86
RNU6-88P-201ENST00000606801 VTNP04004 478 aa3.41□□□□□ -1.86
RNU6-88P-201ENST00000606801 ANKRD34CP0C6C1 535 aa3.41□□□□□ -1.86
RNU6-88P-201ENST00000606801 SPP1P10451 314 aa3.41□□□□□ -1.86
RNU6-88P-201ENST00000606801 F3P13726 295 aa3.41□□□□□ -1.86
RNU6-88P-201ENST00000606801 ALDH4A1P30038 563 aa3.41□□□□□ -1.86
RNU6-88P-201ENST00000606801 LEPRP48357 1165 aaKnown RBP3.41□□□□□ -1.86
RNU6-88P-201ENST00000606801 KCNJ10P78508 379 aa3.41□□□□□ -1.86
RNU6-88P-201ENST00000606801 TRAP1Q12931 704 aaKnown RBP3.41□□□□□ -1.86
RNU6-88P-201ENST00000606801 BFSP1Q12934 665 aa3.41□□□□□ -1.86
RNU6-88P-201ENST00000606801 TMEM187Q14656 261 aa3.41□□□□□ -1.86
RNU6-88P-201ENST00000606801 RRS1Q15050 365 aaKnown RBP3.41□□□□□ -1.86
RNU6-88P-201ENST00000606801 ALDH1L2Q3SY69 923 aa3.41□□□□□ -1.86
RNU6-88P-201ENST00000606801 TXNRD3NBQ6F5E7 133 aa3.41□□□□□ -1.86
RNU6-88P-201ENST00000606801 NOTUMQ6P988 496 aa3.41□□□□□ -1.86
RNU6-88P-201ENST00000606801 MOXD1Q6UVY6 613 aa3.41□□□□□ -1.86
RNU6-88P-201ENST00000606801 NHLRC1Q6VVB1 395 aa3.41□□□□□ -1.86
RNU6-88P-201ENST00000606801 CPEB2Q7Z5Q1 589 aaKnown RBP3.41□□□□□ -1.86
RNU6-88P-201ENST00000606801 DDHD1Q8NEL9 900 aa3.41□□□□□ -1.86
RNU6-88P-201ENST00000606801 OR13C3Q8NGS6 347 aa3.41□□□□□ -1.86
RNU6-88P-201ENST00000606801 NR4A3Q92570 626 aa3.41□□□□□ -1.86
RNU6-88P-201ENST00000606801 FAM162AQ96A26 154 aa3.41□□□□□ -1.86
RNU6-88P-201ENST00000606801 EXOC4Q96A65 974 aa3.41□□□□□ -1.86
RNU6-88P-201ENST00000606801 GMPPAQ96IJ6 420 aaPredicted RBP3.41□□□□□ -1.86
RNU6-88P-201ENST00000606801 KLHL5Q96PQ7 755 aa3.41□□□□□ -1.86
RNU6-88P-201ENST00000606801 FERMT1Q9BQL6 677 aa3.41□□□□□ -1.86
RNU6-88P-201ENST00000606801 THUMPD3Q9BV44 507 aaKnown RBP3.41□□□□□ -1.86
RNU6-88P-201ENST00000606801 RAVER2Q9HCJ3 691 aaKnown RBP3.41□□□□□ -1.86
RNU6-88P-201ENST00000606801 MAN2C1Q9NTJ4 1040 aa3.41□□□□□ -1.86
RNU6-88P-201ENST00000606801 ATAD3AQ9NVI7 634 aa3.41□□□□□ -1.86
RNU6-88P-201ENST00000606801 GTF3C4Q9UKN8 822 aa3.41□□□□□ -1.86
RNU6-88P-201ENST00000606801 POMT1Q9Y6A1 747 aa3.41□□□□□ -1.86
RNU6-88P-201ENST00000606801 MEIOCA2RUB1 952 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms