RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 ARHGAP10A1A4S6 786 aa11.33□□□□□ -0.59
VRK3-223ENST00000601341 NR5A2O00482 541 aa11.33□□□□□ -0.59
VRK3-223ENST00000601341 NME4O00746 187 aa11.33□□□□□ -0.59
VRK3-223ENST00000601341 GUCA1CO95843 209 aa11.33□□□□□ -0.59
VRK3-223ENST00000601341 ANXA5P08758 320 aa11.33□□□□□ -0.59
VRK3-223ENST00000601341 ACP5P13686 325 aa11.33□□□□□ -0.59
VRK3-223ENST00000601341 CAPN3P20807 821 aa11.33□□□□□ -0.59
VRK3-223ENST00000601341 GNPDA1P46926 289 aa11.33□□□□□ -0.59
VRK3-223ENST00000601341 FOXA1P55317 472 aa11.33□□□□□ -0.59
VRK3-223ENST00000601341 POLE2P56282 527 aa11.33□□□□□ -0.59
VRK3-223ENST00000601341 KCNK10P57789 538 aa11.33□□□□□ -0.59
VRK3-223ENST00000601341 MYBPC1Q00872 1141 aa11.33□□□□□ -0.59
VRK3-223ENST00000601341 LSAMPQ13449 338 aa11.33□□□□□ -0.59
VRK3-223ENST00000601341 MAP7Q14244 749 aa11.33□□□□□ -0.59
VRK3-223ENST00000601341 THEMIS2Q5TEJ8 643 aa11.33□□□□□ -0.59
VRK3-223ENST00000601341 SULT1C3Q6IMI6 304 aa11.33□□□□□ -0.59
VRK3-223ENST00000601341 TTC23LQ6PF05 361 aa11.33□□□□□ -0.59
VRK3-223ENST00000601341 XKR5Q6UX68 686 aa11.33□□□□□ -0.59
VRK3-223ENST00000601341 GPRIN3Q6ZVF9 776 aa11.33□□□□□ -0.59
VRK3-223ENST00000601341 RASGRP3Q8IV61 690 aa11.33□□□□□ -0.59
VRK3-223ENST00000601341 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.33□□□□□ -0.59
VRK3-223ENST00000601341 DPP10Q8N608 796 aa11.33□□□□□ -0.59
VRK3-223ENST00000601341 FAM156AQ8NDB6 213 aa11.33□□□□□ -0.59
VRK3-223ENST00000601341 PAPD5Q8NDF8 572 aaKnown RBP11.33□□□□□ -0.59
VRK3-223ENST00000601341 OR13H1Q8NG92 308 aa11.33□□□□□ -0.59
VRK3-223ENST00000601341 LRTOMTQ8WZ04 291 aa11.33□□□□□ -0.59
VRK3-223ENST00000601341 OR1E3Q8WZA6 343 aa11.33□□□□□ -0.59
VRK3-223ENST00000601341 POP5Q969H6 163 aaKnown RBP11.33□□□□□ -0.59
VRK3-223ENST00000601341 NSUN5Q96P11 429 aaKnown RBP11.33□□□□□ -0.59
VRK3-223ENST00000601341 OR2M4Q96R27 311 aa11.33□□□□□ -0.59
VRK3-223ENST00000601341 ORAI3Q9BRQ5 295 aa11.33□□□□□ -0.59
VRK3-223ENST00000601341 OR52A5Q9H2C5 316 aa11.33□□□□□ -0.59
VRK3-223ENST00000601341 AASDHPPTQ9NRN7 309 aa11.33□□□□□ -0.59
VRK3-223ENST00000601341 AGPAT4Q9NRZ5 378 aa11.33□□□□□ -0.59
VRK3-223ENST00000601341 PNPLA3Q9NST1 481 aa11.33□□□□□ -0.59
VRK3-223ENST00000601341 KLQ9UEF7 1012 aa11.33□□□□□ -0.59
VRK3-223ENST00000601341 LEF1Q9UJU2 399 aaPredicted RBP11.33□□□□□ -0.59
VRK3-223ENST00000601341 DOCK9Q9BZ29 2069 aa11.33□□□□□ -0.59
VRK3-223ENST00000601341 DHRS12A0PJE2 317 aa11.33□□□□□ -0.6
VRK3-223ENST00000601341 FAM234BA2RU67 622 aa11.33□□□□□ -0.6
VRK3-223ENST00000601341 TMEM221A6NGB7 291 aa11.33□□□□□ -0.6
VRK3-223ENST00000601341 M0R296 226 aa11.33□□□□□ -0.6
VRK3-223ENST00000601341 E2F3O00716 465 aa11.33□□□□□ -0.6
VRK3-223ENST00000601341 LAMTOR5O43504 91 aa11.33□□□□□ -0.6
VRK3-223ENST00000601341 SLC22A3O75751 556 aa11.33□□□□□ -0.6
VRK3-223ENST00000601341 THEGLP0DJG4 465 aa11.33□□□□□ -0.6
VRK3-223ENST00000601341 TSPAN8P19075 237 aa11.33□□□□□ -0.6
VRK3-223ENST00000601341 ACADLP28330 430 aa11.33□□□□□ -0.6
VRK3-223ENST00000601341 AGTR2P50052 363 aa11.33□□□□□ -0.6
VRK3-223ENST00000601341 HNMTP50135 292 aa11.33□□□□□ -0.6
VRK3-223ENST00000601341 SRP54P61011 504 aaKnown RBP11.33□□□□□ -0.6
VRK3-223ENST00000601341 GRB7Q14451 532 aa11.33□□□□□ -0.6
VRK3-223ENST00000601341 RBBP5Q15291 538 aaKnown RBP11.33□□□□□ -0.6
VRK3-223ENST00000601341 TPRG1LQ5T0D9 272 aa11.33□□□□□ -0.6
VRK3-223ENST00000601341 ZBTB49Q6ZSB9 765 aa11.33□□□□□ -0.6
VRK3-223ENST00000601341 PDZD3Q86UT5 571 aa11.33□□□□□ -0.6
VRK3-223ENST00000601341 DCP2Q8IU60 420 aaKnown RBP11.33□□□□□ -0.6
VRK3-223ENST00000601341 TCAIMQ8N3R3 496 aa11.33□□□□□ -0.6
VRK3-223ENST00000601341 DEFB119Q8N690 84 aa11.33□□□□□ -0.6
VRK3-223ENST00000601341 FBXO15Q8NCQ5 510 aaPredicted RBP11.33□□□□□ -0.6
VRK3-223ENST00000601341 RHBDF1Q96CC6 855 aa11.33□□□□□ -0.6
VRK3-223ENST00000601341 KLHDC7BQ96G42 594 aa11.33□□□□□ -0.6
VRK3-223ENST00000601341 PDXPQ96GD0 296 aa11.33□□□□□ -0.6
VRK3-223ENST00000601341 HGH1Q9BTY7 390 aa11.33□□□□□ -0.6
VRK3-223ENST00000601341 C9orf16Q9BUW7 83 aa11.33□□□□□ -0.6
VRK3-223ENST00000601341 COQ10BQ9H8M1 238 aa11.33□□□□□ -0.6
VRK3-223ENST00000601341 PRMT8Q9NR22 394 aaPredicted RBP11.33□□□□□ -0.6
VRK3-223ENST00000601341 TUBA8Q9NY65 449 aaPredicted RBP11.33□□□□□ -0.6
VRK3-223ENST00000601341 EIF2B4Q9UI10 523 aaKnown RBP11.33□□□□□ -0.6
VRK3-223ENST00000601341 SNX13Q9Y5W8 968 aa11.33□□□□□ -0.6
VRK3-223ENST00000601341 SPTY2D1-AS1A0A0U1RR47 76 aa11.32□□□□□ -0.6
VRK3-223ENST00000601341 C7orf72A4D263 438 aa11.32□□□□□ -0.6
VRK3-223ENST00000601341 ARHGEF33A8MVX0 844 aa11.32□□□□□ -0.6
VRK3-223ENST00000601341 H6PDO95479 791 aa11.32□□□□□ -0.6
VRK3-223ENST00000601341 SLC35G4P0C7Q5 338 aa11.32□□□□□ -0.6
VRK3-223ENST00000601341 LINC00032P0C843 101 aa11.32□□□□□ -0.6
VRK3-223ENST00000601341 HOXB6P17509 224 aaKnown RBP11.32□□□□□ -0.6
VRK3-223ENST00000601341 IDSP22304 550 aa11.32□□□□□ -0.6
VRK3-223ENST00000601341 FASP25445 335 aa11.32□□□□□ -0.6
VRK3-223ENST00000601341 HTR1EP28566 365 aa11.32□□□□□ -0.6
VRK3-223ENST00000601341 GRIA3P42263 894 aa11.32□□□□□ -0.6
VRK3-223ENST00000601341 RACK1P63244 317 aaKnown RBP11.32□□□□□ -0.6
VRK3-223ENST00000601341 DMWDQ09019 674 aa11.32□□□□□ -0.6
VRK3-223ENST00000601341 PRKG2Q13237 762 aa11.32□□□□□ -0.6
VRK3-223ENST00000601341 VPS26BQ4G0F5 336 aa11.32□□□□□ -0.6
VRK3-223ENST00000601341 NHSL2Q5HYW2 709 aa11.32□□□□□ -0.6
VRK3-223ENST00000601341 UNC5DQ6UXZ4 953 aa11.32□□□□□ -0.6
VRK3-223ENST00000601341 FKBP9P1Q75LS8 142 aa11.32□□□□□ -0.6
VRK3-223ENST00000601341 RD3Q7Z3Z2 195 aa11.32□□□□□ -0.6
VRK3-223ENST00000601341 SYVN1Q86TM6 617 aa11.32□□□□□ -0.6
VRK3-223ENST00000601341 PROSER1Q86XN7 944 aa11.32□□□□□ -0.6
VRK3-223ENST00000601341 GALNT4Q8N4A0 578 aa11.32□□□□□ -0.6
VRK3-223ENST00000601341 TRPV3Q8NET8 790 aa11.32□□□□□ -0.6
VRK3-223ENST00000601341 CANT1Q8WVQ1 401 aa11.32□□□□□ -0.6
VRK3-223ENST00000601341 TSACCQ96A04 125 aaPredicted RBP11.32□□□□□ -0.6
VRK3-223ENST00000601341 CENPNQ96H22 339 aaPredicted RBP11.32□□□□□ -0.6
VRK3-223ENST00000601341 CNBD2Q96M20 576 aa11.32□□□□□ -0.6
VRK3-223ENST00000601341 CCDC138Q96M89 665 aa11.32□□□□□ -0.6
VRK3-223ENST00000601341 RBM38Q9H0Z9 239 aaKnown RBP11.32□□□□□ -0.6
VRK3-223ENST00000601341 OSGEPL1Q9H4B0 414 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms