RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 A0A0J9YVX5 310 aa16.14■□□□□ 0.17
TRIM28-215ENST00000601150 ACSL3O95573 720 aa16.14■□□□□ 0.17
TRIM28-215ENST00000601150 GUCA1CO95843 209 aa16.14■□□□□ 0.17
TRIM28-215ENST00000601150 CCDC166P0CW27 439 aa16.14■□□□□ 0.17
TRIM28-215ENST00000601150 AGXTP21549 392 aa16.14■□□□□ 0.17
TRIM28-215ENST00000601150 HRH2P25021 359 aa16.14■□□□□ 0.17
TRIM28-215ENST00000601150 ARSFP54793 590 aa16.14■□□□□ 0.17
TRIM28-215ENST00000601150 VSX2P58304 361 aaPredicted RBP16.14■□□□□ 0.17
TRIM28-215ENST00000601150 RELAQ04206 551 aa16.14■□□□□ 0.17
TRIM28-215ENST00000601150 GRM7Q14831 915 aa16.14■□□□□ 0.17
TRIM28-215ENST00000601150 SLMAPQ14BN4 828 aa16.14■□□□□ 0.17
TRIM28-215ENST00000601150 PTCHD3Q3KNS1 767 aa16.14■□□□□ 0.17
TRIM28-215ENST00000601150 CRTC2Q53ET0 693 aaPredicted RBP16.14■□□□□ 0.17
TRIM28-215ENST00000601150 UBAP2Q5T6F2 1119 aaKnown RBP16.14■□□□□ 0.17
TRIM28-215ENST00000601150 YOD1Q5VVQ6 348 aaPredicted RBP16.14■□□□□ 0.17
TRIM28-215ENST00000601150 FRMPD2BQ6IN97 320 aa16.14■□□□□ 0.17
TRIM28-215ENST00000601150 CAPN13Q6MZZ7 669 aaPredicted RBP16.14■□□□□ 0.17
TRIM28-215ENST00000601150 ADCK2Q7Z695 626 aa16.14■□□□□ 0.17
TRIM28-215ENST00000601150 LRRN4CLQ8ND94 238 aa16.14■□□□□ 0.17
TRIM28-215ENST00000601150 PROKR1Q8TCW9 393 aa16.14■□□□□ 0.17
TRIM28-215ENST00000601150 ALKBH8Q96BT7 664 aaKnown RBP16.14■□□□□ 0.17
TRIM28-215ENST00000601150 MRRFQ96E11 262 aaKnown RBP16.14■□□□□ 0.17
TRIM28-215ENST00000601150 FUT8Q9BYC5 575 aa16.14■□□□□ 0.17
TRIM28-215ENST00000601150 CUEDC1Q9NWM3 386 aaPredicted RBP16.14■□□□□ 0.17
TRIM28-215ENST00000601150 OARD1Q9Y530 152 aa16.14■□□□□ 0.17
TRIM28-215ENST00000601150 ERVH48-1M5A8F1 160 aa16.13■□□□□ 0.17
TRIM28-215ENST00000601150 NKX2-8O15522 239 aa16.13■□□□□ 0.17
TRIM28-215ENST00000601150 ITGB2P05107 769 aa16.13■□□□□ 0.17
TRIM28-215ENST00000601150 RAB40ALP0C0E4 278 aa16.13■□□□□ 0.17
TRIM28-215ENST00000601150 EZRP15311 586 aaKnown RBP16.13■□□□□ 0.17
TRIM28-215ENST00000601150 PTPN4P29074 926 aa16.13■□□□□ 0.17
TRIM28-215ENST00000601150 CRABP2P29373 138 aa16.13■□□□□ 0.17
TRIM28-215ENST00000601150 ATP6V0D1P61421 351 aa16.13■□□□□ 0.17
TRIM28-215ENST00000601150 CDKL1Q00532 357 aa16.13■□□□□ 0.17
TRIM28-215ENST00000601150 CDC20Q12834 499 aa16.13■□□□□ 0.17
TRIM28-215ENST00000601150 TSNQ15631 228 aaKnown RBP16.13■□□□□ 0.17
TRIM28-215ENST00000601150 UAP1Q16222 522 aaPredicted RBP16.13■□□□□ 0.17
TRIM28-215ENST00000601150 WASHC2DQ5SRD0 308 aa16.13■□□□□ 0.17
TRIM28-215ENST00000601150 C1orf189Q5VU69 101 aa16.13■□□□□ 0.17
TRIM28-215ENST00000601150 ZNF385CQ66K41 422 aaPredicted RBP16.13■□□□□ 0.17
TRIM28-215ENST00000601150 LCN10Q6JVE6 187 aa16.13■□□□□ 0.17
TRIM28-215ENST00000601150 FBXO42Q6P3S6 717 aa16.13■□□□□ 0.17
TRIM28-215ENST00000601150 LCTLQ6UWM7 567 aa16.13■□□□□ 0.17
TRIM28-215ENST00000601150 RAPH1Q70E73 1250 aa16.13■□□□□ 0.17
TRIM28-215ENST00000601150 FRA10AC1Q70Z53 315 aa16.13■□□□□ 0.17
TRIM28-215ENST00000601150 C17orf64Q86WR6 236 aa16.13■□□□□ 0.17
TRIM28-215ENST00000601150 TTC29Q8NA56 475 aaPredicted RBP16.13■□□□□ 0.17
TRIM28-215ENST00000601150 OR56A3Q8NH54 315 aa16.13■□□□□ 0.17
TRIM28-215ENST00000601150 TTC9Q92623 222 aa16.13■□□□□ 0.17
TRIM28-215ENST00000601150 CATSPER2Q96P56 530 aa16.13■□□□□ 0.17
TRIM28-215ENST00000601150 GBP5Q96PP8 586 aa16.13■□□□□ 0.17
TRIM28-215ENST00000601150 RUFY1Q96T51 708 aa16.13■□□□□ 0.17
TRIM28-215ENST00000601150 C17orf62Q9BQA9 187 aa16.13■□□□□ 0.17
TRIM28-215ENST00000601150 HAUS8Q9BT25 410 aa16.13■□□□□ 0.17
TRIM28-215ENST00000601150 ACTL8Q9H568 366 aa16.13■□□□□ 0.17
TRIM28-215ENST00000601150 TMEM184CQ9NVA4 438 aa16.13■□□□□ 0.17
TRIM28-215ENST00000601150 DHCR7Q9UBM7 475 aaKnown RBP16.13■□□□□ 0.17
TRIM28-215ENST00000601150 FARSAQ9Y285 508 aaKnown RBP16.13■□□□□ 0.17
TRIM28-215ENST00000601150 SEC16AO15027 2179 aa16.13■□□□□ 0.17
TRIM28-215ENST00000601150 MGAQ8IWI9 3026 aa16.13■□□□□ 0.17
TRIM28-215ENST00000601150 LOC105369274A0A096LPK9 316 aa16.12■□□□□ 0.17
TRIM28-215ENST00000601150 LOC102723532A0A0G2JNH3 316 aa16.12■□□□□ 0.17
TRIM28-215ENST00000601150 FITM1A5D6W6 292 aa16.12■□□□□ 0.17
TRIM28-215ENST00000601150 C9J4A7 227 aa16.12■□□□□ 0.17
TRIM28-215ENST00000601150 H7BY64 318 aa16.12■□□□□ 0.17
TRIM28-215ENST00000601150 ATXN7O15265 892 aaPredicted RBP16.12■□□□□ 0.17
TRIM28-215ENST00000601150 CREG1O75629 220 aa16.12■□□□□ 0.17
TRIM28-215ENST00000601150 RECKO95980 971 aa16.12■□□□□ 0.17
TRIM28-215ENST00000601150 ANXA5P08758 320 aa16.12■□□□□ 0.17
TRIM28-215ENST00000601150 PRKAR1AP10644 381 aa16.12■□□□□ 0.17
TRIM28-215ENST00000601150 NPPBP16860 134 aa16.12■□□□□ 0.17
TRIM28-215ENST00000601150 GCGRP47871 477 aa16.12■□□□□ 0.17
TRIM28-215ENST00000601150 DCDP81605 110 aaKnown RBP16.12■□□□□ 0.17
TRIM28-215ENST00000601150 ZXDCQ2QGD7 858 aaPredicted RBP16.12■□□□□ 0.17
TRIM28-215ENST00000601150 FAM214AQ32MH5 1076 aa16.12■□□□□ 0.17
TRIM28-215ENST00000601150 C16orf46Q6P387 395 aa16.12■□□□□ 0.17
TRIM28-215ENST00000601150 CMC1Q7Z7K0 106 aa16.12■□□□□ 0.17
TRIM28-215ENST00000601150 OR4N4Q8N0Y3 316 aa16.12■□□□□ 0.17
TRIM28-215ENST00000601150 SPATA6LQ8N4H0 392 aa16.12■□□□□ 0.17
TRIM28-215ENST00000601150 PYCR2Q96C36 320 aa16.12■□□□□ 0.17
TRIM28-215ENST00000601150 WBP1Q96G27 269 aa16.12■□□□□ 0.17
TRIM28-215ENST00000601150 UBXN10Q96LJ8 280 aa16.12■□□□□ 0.17
TRIM28-215ENST00000601150 PRAP1Q96NZ9 151 aa16.12■□□□□ 0.17
TRIM28-215ENST00000601150 EGFL8Q99944 293 aa16.12■□□□□ 0.17
TRIM28-215ENST00000601150 NLNQ9BYT8 704 aa16.12■□□□□ 0.17
TRIM28-215ENST00000601150 STARD5Q9NSY2 213 aa16.12■□□□□ 0.17
TRIM28-215ENST00000601150 CUTCQ9NTM9 273 aa16.12■□□□□ 0.17
TRIM28-215ENST00000601150 CCDC88CQ9P219 2028 aa16.11■□□□□ 0.17
TRIM28-215ENST00000601150 A0A087WUV0 522 aaPredicted RBP16.11■□□□□ 0.17
TRIM28-215ENST00000601150 A0A1B0GX78 115 aa16.11■□□□□ 0.17
TRIM28-215ENST00000601150 H0YGG7 62 aa16.11■□□□□ 0.17
TRIM28-215ENST00000601150 HAT1O14929 419 aa16.11■□□□□ 0.17
TRIM28-215ENST00000601150 DSCR3O14972 297 aa16.11■□□□□ 0.17
TRIM28-215ENST00000601150 ZNF500O60304 480 aaPredicted RBP16.11■□□□□ 0.17
TRIM28-215ENST00000601150 EIF2S1P05198 315 aaKnown RBP16.11■□□□□ 0.17
TRIM28-215ENST00000601150 CAPN1P07384 714 aa16.11■□□□□ 0.17
TRIM28-215ENST00000601150 SLC35E2BP0CK96 405 aa16.11■□□□□ 0.17
TRIM28-215ENST00000601150 CD1DP15813 335 aa16.11■□□□□ 0.17
TRIM28-215ENST00000601150 ALAS2P22557 587 aa16.11■□□□□ 0.17
TRIM28-215ENST00000601150 HNMTP50135 292 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms