RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 MAATS1Q7Z4T9 603 aa17.91■□□□□ 0.46
PNKP-213ENST00000599543 ANKMY2Q8IV38 441 aa17.91■□□□□ 0.46
PNKP-213ENST00000599543 SPNS2Q8IVW8 549 aa17.91■□□□□ 0.46
PNKP-213ENST00000599543 NOA1Q8NC60 698 aaKnown RBP17.91■□□□□ 0.46
PNKP-213ENST00000599543 SSC4DQ8WTU2 575 aa17.91■□□□□ 0.46
PNKP-213ENST00000599543 CFAP36Q96G28 342 aa17.91■□□□□ 0.46
PNKP-213ENST00000599543 WDR83Q9BRX9 315 aaKnown RBP17.91■□□□□ 0.46
PNKP-213ENST00000599543 LRRC1Q9BTT6 524 aa17.91■□□□□ 0.46
PNKP-213ENST00000599543 SOX17Q9H6I2 414 aaPredicted RBP17.91■□□□□ 0.46
PNKP-213ENST00000599543 SLC6A20Q9NP91 592 aa17.91■□□□□ 0.46
PNKP-213ENST00000599543 ENAMQ9NRM1 1142 aa17.91■□□□□ 0.46
PNKP-213ENST00000599543 CHMP2BQ9UQN3 213 aa17.91■□□□□ 0.46
PNKP-213ENST00000599543 VPS9D1Q9Y2B5 631 aa17.91■□□□□ 0.46
PNKP-213ENST00000599543 KLK4Q9Y5K2 254 aa17.91■□□□□ 0.46
PNKP-213ENST00000599543 FAM237BA0A1B0GVD1 139 aa17.9■□□□□ 0.46
PNKP-213ENST00000599543 A0A1W2PPV9 198 aa17.9■□□□□ 0.46
PNKP-213ENST00000599543 ESYT3A0FGR9 886 aa17.9■□□□□ 0.46
PNKP-213ENST00000599543 SEMA7AO75326 666 aa17.9■□□□□ 0.46
PNKP-213ENST00000599543 MATN4O95460 622 aa17.9■□□□□ 0.46
PNKP-213ENST00000599543 EIF2S1P05198 315 aaKnown RBP17.9■□□□□ 0.46
PNKP-213ENST00000599543 ERVK-10P10266 1014 aa17.9■□□□□ 0.46
PNKP-213ENST00000599543 CMPK1P30085 196 aa17.9■□□□□ 0.46
PNKP-213ENST00000599543 OR1D4P47884 311 aa17.9■□□□□ 0.46
PNKP-213ENST00000599543 PRAMEF13Q5VWM6 474 aa17.9■□□□□ 0.46
PNKP-213ENST00000599543 ARMC3Q5W041 872 aa17.9■□□□□ 0.46
PNKP-213ENST00000599543 DUPD1Q68J44 220 aa17.9■□□□□ 0.46
PNKP-213ENST00000599543 FRMPD2BQ6IN97 320 aa17.9■□□□□ 0.46
PNKP-213ENST00000599543 RNF44Q7L0R7 432 aa17.9■□□□□ 0.46
PNKP-213ENST00000599543 OR2A1Q8NGT9 310 aa17.9■□□□□ 0.46
PNKP-213ENST00000599543 PRR7Q8TB68 274 aa17.9■□□□□ 0.46
PNKP-213ENST00000599543 SNRNP40Q96DI7 357 aaKnown RBP17.9■□□□□ 0.46
PNKP-213ENST00000599543 C19orf60Q96EN9 201 aa17.9■□□□□ 0.46
PNKP-213ENST00000599543 VPS50Q96JG6 964 aa17.9■□□□□ 0.46
PNKP-213ENST00000599543 FAM114A2Q9NRY5 505 aa17.9■□□□□ 0.46
PNKP-213ENST00000599543 CUEDC1Q9NWM3 386 aaPredicted RBP17.9■□□□□ 0.46
PNKP-213ENST00000599543 GRHL1Q9NZI5 618 aa17.9■□□□□ 0.46
PNKP-213ENST00000599543 ZC3H7BQ9UGR2 993 aaKnown RBP17.9■□□□□ 0.46
PNKP-213ENST00000599543 MAU2Q9Y6X3 613 aa17.9■□□□□ 0.46
PNKP-213ENST00000599543 UNC79Q9P2D8 2635 aa17.9■□□□□ 0.46
PNKP-213ENST00000599543 DOPEY1Q5JWR5 2465 aa17.9■□□□□ 0.46
PNKP-213ENST00000599543 ZCWPW2A0A1B0GU75 182 aa17.89■□□□□ 0.45
PNKP-213ENST00000599543 HYKKA2RU49 373 aa17.89■□□□□ 0.45
PNKP-213ENST00000599543 SOCS6O14544 535 aa17.89■□□□□ 0.45
PNKP-213ENST00000599543 NRP2O60462 931 aa17.89■□□□□ 0.45
PNKP-213ENST00000599543 ALOX12BO75342 701 aa17.89■□□□□ 0.45
PNKP-213ENST00000599543 ELK3P41970 407 aa17.89■□□□□ 0.45
PNKP-213ENST00000599543 FASTKQ14296 549 aaKnown RBP17.89■□□□□ 0.45
PNKP-213ENST00000599543 GBX1Q14549 363 aa17.89■□□□□ 0.45
PNKP-213ENST00000599543 FASTKD3Q14CZ7 662 aaKnown RBP17.89■□□□□ 0.45
PNKP-213ENST00000599543 RBBP7Q16576 425 aa17.89■□□□□ 0.45
PNKP-213ENST00000599543 EIF2S3LQ2VIR3 472 aaKnown RBP17.89■□□□□ 0.45
PNKP-213ENST00000599543 TUBB8Q3ZCM7 444 aa17.89■□□□□ 0.45
PNKP-213ENST00000599543 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.89■□□□□ 0.45
PNKP-213ENST00000599543 C8orf74Q6P047 294 aa17.89■□□□□ 0.45
PNKP-213ENST00000599543 CILP2Q8IUL8 1156 aa17.89■□□□□ 0.45
PNKP-213ENST00000599543 CISD2Q8N5K1 135 aaKnown RBP17.89■□□□□ 0.45
PNKP-213ENST00000599543 OR9A1PQ8NGU1 263 aa17.89■□□□□ 0.45
PNKP-213ENST00000599543 ZFYVE21Q9BQ24 234 aa17.89■□□□□ 0.45
PNKP-213ENST00000599543 ACAT2Q9BWD1 397 aa17.89■□□□□ 0.45
PNKP-213ENST00000599543 ZNF304Q9HCX3 659 aa17.89■□□□□ 0.45
PNKP-213ENST00000599543 SEMA3GQ9NS98 782 aa17.89■□□□□ 0.45
PNKP-213ENST00000599543 C20orf96Q9NUD7 363 aaPredicted RBP17.89■□□□□ 0.45
PNKP-213ENST00000599543 ASF1BQ9NVP2 202 aa17.89■□□□□ 0.45
PNKP-213ENST00000599543 INTS10Q9NVR2 710 aaKnown RBP17.89■□□□□ 0.45
PNKP-213ENST00000599543 HS3ST3B1Q9Y662 390 aa17.89■□□□□ 0.45
PNKP-213ENST00000599543 TEX15Q9BXT5 2789 aa17.88■□□□□ 0.45
PNKP-213ENST00000599543 NOTCH2Q04721 2471 aa17.88■□□□□ 0.45
PNKP-213ENST00000599543 LOC105369274A0A096LPK9 316 aa17.88■□□□□ 0.45
PNKP-213ENST00000599543 LOC102723532A0A0G2JNH3 316 aa17.88■□□□□ 0.45
PNKP-213ENST00000599543 ARHGEF33A8MVX0 844 aa17.88■□□□□ 0.45
PNKP-213ENST00000599543 VPS26AO75436 327 aa17.88■□□□□ 0.45
PNKP-213ENST00000599543 PKMP14618 531 aaKnown RBP17.88■□□□□ 0.45
PNKP-213ENST00000599543 RPA3P35244 121 aaPredicted RBP17.88■□□□□ 0.45
PNKP-213ENST00000599543 ARL4CP56559 192 aa17.88■□□□□ 0.45
PNKP-213ENST00000599543 OCA2Q04671 838 aa17.88■□□□□ 0.45
PNKP-213ENST00000599543 TSTA3Q13630 321 aaPredicted RBP17.88■□□□□ 0.45
PNKP-213ENST00000599543 CRYMQ14894 314 aa17.88■□□□□ 0.45
PNKP-213ENST00000599543 NR6A1Q15406 480 aa17.88■□□□□ 0.45
PNKP-213ENST00000599543 HIF1AQ16665 826 aa17.88■□□□□ 0.45
PNKP-213ENST00000599543 KLHL38Q2WGJ6 581 aa17.88■□□□□ 0.45
PNKP-213ENST00000599543 AGAP7PQ5VUJ5 663 aa17.88■□□□□ 0.45
PNKP-213ENST00000599543 ZNF470Q6ECI4 717 aa17.88■□□□□ 0.45
PNKP-213ENST00000599543 NEPROQ6NW34 567 aa17.88■□□□□ 0.45
PNKP-213ENST00000599543 PRMT9Q6P2P2 845 aa17.88■□□□□ 0.45
PNKP-213ENST00000599543 KIRREL2Q6UWL6 708 aa17.88■□□□□ 0.45
PNKP-213ENST00000599543 DENND6AQ8IWF6 608 aa17.88■□□□□ 0.45
PNKP-213ENST00000599543 OR4N4Q8N0Y3 316 aa17.88■□□□□ 0.45
PNKP-213ENST00000599543 PDIK1LQ8N165 341 aa17.88■□□□□ 0.45
PNKP-213ENST00000599543 DTWD1Q8N5C7 304 aa17.88■□□□□ 0.45
PNKP-213ENST00000599543 SMPDL3AQ92484 453 aa17.88■□□□□ 0.45
PNKP-213ENST00000599543 CABS1Q96KC9 395 aa17.88■□□□□ 0.45
PNKP-213ENST00000599543 AGAP4Q96P64 663 aa17.88■□□□□ 0.45
PNKP-213ENST00000599543 EBNA1BP2Q99848 306 aaKnown RBP17.88■□□□□ 0.45
PNKP-213ENST00000599543 DPH7Q9BTV6 452 aa17.88■□□□□ 0.45
PNKP-213ENST00000599543 CRB3Q9BUF7 120 aa17.88■□□□□ 0.45
PNKP-213ENST00000599543 PLAC1Q9HBJ0 212 aa17.88■□□□□ 0.45
PNKP-213ENST00000599543 ZBTB20Q9HC78 741 aaPredicted RBP17.88■□□□□ 0.45
PNKP-213ENST00000599543 MRPS30Q9NP92 439 aaKnown RBP17.88■□□□□ 0.45
PNKP-213ENST00000599543 SLC17A6Q9P2U8 582 aa17.88■□□□□ 0.45
PNKP-213ENST00000599543 ZNF282Q9UDV7 671 aaPredicted RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms