RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 PROKR1Q8TCW9 393 aa13.27□□□□□ -0.29
UPF1-205ENST00000598209 FBXL8Q96CD0 374 aa13.27□□□□□ -0.29
UPF1-205ENST00000598209 MRRFQ96E11 262 aaKnown RBP13.27□□□□□ -0.29
UPF1-205ENST00000598209 ZNF285Q96NJ3 590 aa13.27□□□□□ -0.29
UPF1-205ENST00000598209 ZFYVE21Q9BQ24 234 aa13.27□□□□□ -0.29
UPF1-205ENST00000598209 DPH2Q9BQC3 489 aaPredicted RBP13.27□□□□□ -0.29
UPF1-205ENST00000598209 RHOXF2Q9BQY4 288 aa13.27□□□□□ -0.29
UPF1-205ENST00000598209 NDC1Q9BTX1 674 aa13.27□□□□□ -0.29
UPF1-205ENST00000598209 SGPP1Q9BX95 441 aa13.27□□□□□ -0.29
UPF1-205ENST00000598209 GPR87Q9BY21 358 aa13.27□□□□□ -0.29
UPF1-205ENST00000598209 DERL2Q9GZP9 239 aa13.27□□□□□ -0.29
UPF1-205ENST00000598209 PCBD2Q9H0N5 130 aa13.27□□□□□ -0.29
UPF1-205ENST00000598209 ACTL8Q9H568 366 aa13.27□□□□□ -0.29
UPF1-205ENST00000598209 STARD5Q9NSY2 213 aa13.27□□□□□ -0.29
UPF1-205ENST00000598209 TXLNGQ9NUQ3 528 aa13.27□□□□□ -0.29
UPF1-205ENST00000598209 CUEDC1Q9NWM3 386 aaPredicted RBP13.27□□□□□ -0.29
UPF1-205ENST00000598209 UTP6Q9NYH9 597 aaKnown RBP13.27□□□□□ -0.29
UPF1-205ENST00000598209 DHCR7Q9UBM7 475 aaKnown RBP13.27□□□□□ -0.29
UPF1-205ENST00000598209 CTNNAL1Q9UBT7 734 aa13.27□□□□□ -0.29
UPF1-205ENST00000598209 NFU1Q9UMS0 254 aa13.27□□□□□ -0.29
UPF1-205ENST00000598209 SNX7Q9UNH6 387 aa13.27□□□□□ -0.29
UPF1-205ENST00000598209 LOC105369274A0A096LPK9 316 aa13.26□□□□□ -0.29
UPF1-205ENST00000598209 LOC102723532A0A0G2JNH3 316 aa13.26□□□□□ -0.29
UPF1-205ENST00000598209 ATXN7O15265 892 aaPredicted RBP13.26□□□□□ -0.29
UPF1-205ENST00000598209 SRPX2O60687 465 aaPredicted RBP13.26□□□□□ -0.29
UPF1-205ENST00000598209 CREG1O75629 220 aa13.26□□□□□ -0.29
UPF1-205ENST00000598209 ITGB2P05107 769 aa13.26□□□□□ -0.29
UPF1-205ENST00000598209 RAB40ALP0C0E4 278 aa13.26□□□□□ -0.29
UPF1-205ENST00000598209 CCDC166P0CW27 439 aa13.26□□□□□ -0.29
UPF1-205ENST00000598209 CCND1P24385 295 aa13.26□□□□□ -0.29
UPF1-205ENST00000598209 PTPN4P29074 926 aa13.26□□□□□ -0.29
UPF1-205ENST00000598209 GCGRP47871 477 aa13.26□□□□□ -0.29
UPF1-205ENST00000598209 ARSFP54793 590 aa13.26□□□□□ -0.29
UPF1-205ENST00000598209 RAB10P61026 200 aa13.26□□□□□ -0.29
UPF1-205ENST00000598209 RPS18P62269 152 aaKnown RBP13.26□□□□□ -0.29
UPF1-205ENST00000598209 ERV3-1Q14264 604 aa13.26□□□□□ -0.29
UPF1-205ENST00000598209 GRM7Q14831 915 aa13.26□□□□□ -0.29
UPF1-205ENST00000598209 SLMAPQ14BN4 828 aa13.26□□□□□ -0.29
UPF1-205ENST00000598209 TSNQ15631 228 aaKnown RBP13.26□□□□□ -0.29
UPF1-205ENST00000598209 ZKSCAN8Q15776 578 aaPredicted RBP13.26□□□□□ -0.29
UPF1-205ENST00000598209 ZXDCQ2QGD7 858 aaPredicted RBP13.26□□□□□ -0.29
UPF1-205ENST00000598209 CRTC2Q53ET0 693 aaPredicted RBP13.26□□□□□ -0.29
UPF1-205ENST00000598209 SOWAHCQ53LP3 525 aaPredicted RBP13.26□□□□□ -0.29
UPF1-205ENST00000598209 TAF1BQ53T94 588 aaPredicted RBP13.26□□□□□ -0.29
UPF1-205ENST00000598209 WASHC2DQ5SRD0 308 aa13.26□□□□□ -0.29
UPF1-205ENST00000598209 ATP1A1-AS1Q5TC04 95 aa13.26□□□□□ -0.29
UPF1-205ENST00000598209 CAPN13Q6MZZ7 669 aaPredicted RBP13.26□□□□□ -0.29
UPF1-205ENST00000598209 LCTLQ6UWM7 567 aa13.26□□□□□ -0.29
UPF1-205ENST00000598209 ADCK2Q7Z695 626 aa13.26□□□□□ -0.29
UPF1-205ENST00000598209 ADAMTSL2Q86TH1 951 aa13.26□□□□□ -0.29
UPF1-205ENST00000598209 OR4N4Q8N0Y3 316 aa13.26□□□□□ -0.29
UPF1-205ENST00000598209 TTC29Q8NA56 475 aaPredicted RBP13.26□□□□□ -0.29
UPF1-205ENST00000598209 ATL1Q8WXF7 558 aa13.26□□□□□ -0.29
UPF1-205ENST00000598209 EXTL1Q92935 676 aa13.26□□□□□ -0.29
UPF1-205ENST00000598209 BBC3Q96PG8 261 aaPredicted RBP13.26□□□□□ -0.29
UPF1-205ENST00000598209 GBP5Q96PP8 586 aa13.26□□□□□ -0.29
UPF1-205ENST00000598209 CYTH2Q99418 400 aa13.26□□□□□ -0.29
UPF1-205ENST00000598209 UNKQ9C0B0 810 aaKnown RBP13.26□□□□□ -0.29
UPF1-205ENST00000598209 ACSS3Q9H6R3 686 aa13.26□□□□□ -0.29
UPF1-205ENST00000598209 L2HGDHQ9H9P8 463 aa13.26□□□□□ -0.29
UPF1-205ENST00000598209 ENAMQ9NRM1 1142 aa13.26□□□□□ -0.29
UPF1-205ENST00000598209 SH2B3Q9UQQ2 575 aa13.26□□□□□ -0.29
UPF1-205ENST00000598209 FARSAQ9Y285 508 aaKnown RBP13.26□□□□□ -0.29
UPF1-205ENST00000598209 OARD1Q9Y530 152 aa13.26□□□□□ -0.29
UPF1-205ENST00000598209 FITM1A5D6W6 292 aa13.25□□□□□ -0.29
UPF1-205ENST00000598209 C9J4A7 227 aa13.25□□□□□ -0.29
UPF1-205ENST00000598209 H0YGG7 62 aa13.25□□□□□ -0.29
UPF1-205ENST00000598209 H7BY64 318 aa13.25□□□□□ -0.29
UPF1-205ENST00000598209 HAT1O14929 419 aa13.25□□□□□ -0.29
UPF1-205ENST00000598209 EIF2S1P05198 315 aaKnown RBP13.25□□□□□ -0.29
UPF1-205ENST00000598209 CAPN1P07384 714 aa13.25□□□□□ -0.29
UPF1-205ENST00000598209 ATXN8OSP0DMR3 200 aa13.25□□□□□ -0.29
UPF1-205ENST00000598209 EZRP15311 586 aaKnown RBP13.25□□□□□ -0.29
UPF1-205ENST00000598209 ALAS2P22557 587 aa13.25□□□□□ -0.29
UPF1-205ENST00000598209 HRH2P25021 359 aa13.25□□□□□ -0.29
UPF1-205ENST00000598209 ARF3P61204 181 aaPredicted RBP13.25□□□□□ -0.29
UPF1-205ENST00000598209 CDKL1Q00532 357 aa13.25□□□□□ -0.29
UPF1-205ENST00000598209 UAP1Q16222 522 aaPredicted RBP13.25□□□□□ -0.29
UPF1-205ENST00000598209 TBR1Q16650 682 aa13.25□□□□□ -0.29
UPF1-205ENST00000598209 YOD1Q5VVQ6 348 aaPredicted RBP13.25□□□□□ -0.29
UPF1-205ENST00000598209 PCSK4Q6UW60 755 aa13.25□□□□□ -0.29
UPF1-205ENST00000598209 TTLL10Q6ZVT0 673 aa13.25□□□□□ -0.29
UPF1-205ENST00000598209 FRA10AC1Q70Z53 315 aa13.25□□□□□ -0.29
UPF1-205ENST00000598209 CMC1Q7Z7K0 106 aa13.25□□□□□ -0.29
UPF1-205ENST00000598209 C17orf64Q86WR6 236 aa13.25□□□□□ -0.29
UPF1-205ENST00000598209 SPATA6LQ8N4H0 392 aa13.25□□□□□ -0.29
UPF1-205ENST00000598209 ENDOVQ8N8Q3 282 aaKnown RBP13.25□□□□□ -0.29
UPF1-205ENST00000598209 OR56A3Q8NH54 315 aa13.25□□□□□ -0.29
UPF1-205ENST00000598209 PYCR2Q96C36 320 aa13.25□□□□□ -0.29
UPF1-205ENST00000598209 PRAP1Q96NZ9 151 aa13.25□□□□□ -0.29
UPF1-205ENST00000598209 CATSPER2Q96P56 530 aa13.25□□□□□ -0.29
UPF1-205ENST00000598209 EGFL8Q99944 293 aa13.25□□□□□ -0.29
UPF1-205ENST00000598209 HAUS8Q9BT25 410 aa13.25□□□□□ -0.29
UPF1-205ENST00000598209 FUT8Q9BYC5 575 aa13.25□□□□□ -0.29
UPF1-205ENST00000598209 NLNQ9BYT8 704 aa13.25□□□□□ -0.29
UPF1-205ENST00000598209 FAM117AQ9C073 453 aa13.25□□□□□ -0.29
UPF1-205ENST00000598209 CUTCQ9NTM9 273 aa13.25□□□□□ -0.29
UPF1-205ENST00000598209 TMEM184CQ9NVA4 438 aa13.25□□□□□ -0.29
UPF1-205ENST00000598209 NDOR1Q9UHB4 597 aa13.25□□□□□ -0.29
UPF1-205ENST00000598209 CACNA1GO43497 2377 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms