RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 ERGP11308 486 aa9.47□□□□□ -0.89
LIG1-209ENST00000596104 COX6B1P14854 86 aa9.47□□□□□ -0.89
LIG1-209ENST00000596104 CXCR2P25025 360 aa9.47□□□□□ -0.89
LIG1-209ENST00000596104 CYLC1P35663 651 aaPredicted RBP9.47□□□□□ -0.89
LIG1-209ENST00000596104 PPARGP37231 505 aaPredicted RBP9.47□□□□□ -0.89
LIG1-209ENST00000596104 SLC26A3P40879 764 aa9.47□□□□□ -0.89
LIG1-209ENST00000596104 ARF3P61204 181 aaPredicted RBP9.47□□□□□ -0.89
LIG1-209ENST00000596104 PRAMEP78395 509 aa9.47□□□□□ -0.89
LIG1-209ENST00000596104 ADORA2A-AS1P86434 159 aa9.47□□□□□ -0.89
LIG1-209ENST00000596104 FASTKQ14296 549 aaKnown RBP9.47□□□□□ -0.89
LIG1-209ENST00000596104 FASTKD1Q53R41 847 aaKnown RBP9.47□□□□□ -0.89
LIG1-209ENST00000596104 AARS2Q5JTZ9 985 aaKnown RBP9.47□□□□□ -0.89
LIG1-209ENST00000596104 FAAH2Q6GMR7 532 aa9.47□□□□□ -0.89
LIG1-209ENST00000596104 HIBCHQ6NVY1 386 aaPredicted RBP9.47□□□□□ -0.89
LIG1-209ENST00000596104 TMEM205Q6UW68 189 aa9.47□□□□□ -0.89
LIG1-209ENST00000596104 PEX13Q92968 403 aa9.47□□□□□ -0.89
LIG1-209ENST00000596104 CABS1Q96KC9 395 aa9.47□□□□□ -0.89
LIG1-209ENST00000596104 IMMP1LQ96LU5 166 aa9.47□□□□□ -0.89
LIG1-209ENST00000596104 DPH7Q9BTV6 452 aa9.47□□□□□ -0.89
LIG1-209ENST00000596104 TGIF2Q9GZN2 237 aa9.47□□□□□ -0.89
LIG1-209ENST00000596104 LACRTQ9GZZ8 138 aa9.47□□□□□ -0.89
LIG1-209ENST00000596104 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.47□□□□□ -0.89
LIG1-209ENST00000596104 ZNF700Q9H0M5 742 aa9.47□□□□□ -0.89
LIG1-209ENST00000596104 ETNK1Q9HBU6 452 aa9.47□□□□□ -0.89
LIG1-209ENST00000596104 SPATA7Q9P0W8 599 aa9.47□□□□□ -0.89
LIG1-209ENST00000596104 CDC14AQ9UNH5 594 aa9.47□□□□□ -0.89
LIG1-209ENST00000596104 RUVBL1Q9Y265 456 aaKnown RBP9.47□□□□□ -0.89
LIG1-209ENST00000596104 CSMD2Q7Z408 3487 aa9.47□□□□□ -0.89
LIG1-209ENST00000596104 IGKV1-8A0A0C4DH67 115 aa9.46□□□□□ -0.9
LIG1-209ENST00000596104 A0A0U1RQJ8 604 aa9.46□□□□□ -0.9
LIG1-209ENST00000596104 PRPF4O43172 522 aaKnown RBP eCLIP9.46□□□□□ -0.9
LIG1-209ENST00000596104 FOXS1O43638 330 aa9.46□□□□□ -0.9
LIG1-209ENST00000596104 SLC19A2O60779 497 aa9.46□□□□□ -0.9
LIG1-209ENST00000596104 GAS8O95995 478 aa9.46□□□□□ -0.9
LIG1-209ENST00000596104 HEXBP07686 556 aa9.46□□□□□ -0.9
LIG1-209ENST00000596104 ERVK-10P10266 1014 aa9.46□□□□□ -0.9
LIG1-209ENST00000596104 CCNFP41002 786 aa9.46□□□□□ -0.9
LIG1-209ENST00000596104 TTPAP49638 278 aa9.46□□□□□ -0.9
LIG1-209ENST00000596104 SNRPNP63162 240 aaKnown RBP9.46□□□□□ -0.9
LIG1-209ENST00000596104 PMP22Q01453 160 aa9.46□□□□□ -0.9
LIG1-209ENST00000596104 GBX1Q14549 363 aa9.46□□□□□ -0.9
LIG1-209ENST00000596104 NAA25Q14CX7 972 aa9.46□□□□□ -0.9
LIG1-209ENST00000596104 CDSNQ15517 529 aa9.46□□□□□ -0.9
LIG1-209ENST00000596104 C3AR1Q16581 482 aa9.46□□□□□ -0.9
LIG1-209ENST00000596104 HKDC1Q2TB90 917 aa9.46□□□□□ -0.9
LIG1-209ENST00000596104 ABHD17BQ5VST6 288 aa9.46□□□□□ -0.9
LIG1-209ENST00000596104 PTRHD1Q6GMV3 140 aaKnown RBP9.46□□□□□ -0.9
LIG1-209ENST00000596104 ZNF425Q6IV72 752 aa9.46□□□□□ -0.9
LIG1-209ENST00000596104 XKRXQ6PP77 449 aa9.46□□□□□ -0.9
LIG1-209ENST00000596104 PPP1R21Q6ZMI0 780 aa9.46□□□□□ -0.9
LIG1-209ENST00000596104 PAQR7Q86WK9 346 aa9.46□□□□□ -0.9
LIG1-209ENST00000596104 ZC3H7AQ8IWR0 971 aaKnown RBP9.46□□□□□ -0.9
LIG1-209ENST00000596104 RAB42Q8N4Z0 105 aa9.46□□□□□ -0.9
LIG1-209ENST00000596104 CSNK1A1LQ8N752 337 aa9.46□□□□□ -0.9
LIG1-209ENST00000596104 MRFAP1L1Q96HT8 127 aa9.46□□□□□ -0.9
LIG1-209ENST00000596104 PANX3Q96QZ0 392 aa9.46□□□□□ -0.9
LIG1-209ENST00000596104 OR2A5Q96R48 311 aa9.46□□□□□ -0.9
LIG1-209ENST00000596104 PLCD4Q9BRC7 762 aa9.46□□□□□ -0.9
LIG1-209ENST00000596104 ACAT2Q9BWD1 397 aa9.46□□□□□ -0.9
LIG1-209ENST00000596104 MKKSQ9NPJ1 570 aaPredicted RBP9.46□□□□□ -0.9
LIG1-209ENST00000596104 CATSPERZQ9NTU4 200 aa9.46□□□□□ -0.9
LIG1-209ENST00000596104 SH3BGRL2Q9UJC5 107 aa9.46□□□□□ -0.9
LIG1-209ENST00000596104 MRFAP1Q9Y605 127 aa9.46□□□□□ -0.9
LIG1-209ENST00000596104 EPN1Q9Y6I3 576 aaPredicted RBP9.46□□□□□ -0.9
LIG1-209ENST00000596104 PKDREJQ9NTG1 2253 aa9.45□□□□□ -0.9
LIG1-209ENST00000596104 SOWAHDA6NJG2 315 aa9.45□□□□□ -0.9
LIG1-209ENST00000596104 C19orf84I3L1E1 186 aa9.45□□□□□ -0.9
LIG1-209ENST00000596104 KPNA5O15131 536 aa9.45□□□□□ -0.9
LIG1-209ENST00000596104 CD3EAPO15446 510 aaKnown RBP9.45□□□□□ -0.9
LIG1-209ENST00000596104 PHF2O75151 1096 aa9.45□□□□□ -0.9
LIG1-209ENST00000596104 MATN4O95460 622 aa9.45□□□□□ -0.9
LIG1-209ENST00000596104 ICAM2P13598 275 aa9.45□□□□□ -0.9
LIG1-209ENST00000596104 AGAP20933 346 aa9.45□□□□□ -0.9
LIG1-209ENST00000596104 RPS3P23396 243 aaKnown RBP eCLIP9.45□□□□□ -0.9
LIG1-209ENST00000596104 CMPK1P30085 196 aa9.45□□□□□ -0.9
LIG1-209ENST00000596104 STIP1P31948 543 aaKnown RBP9.45□□□□□ -0.9
LIG1-209ENST00000596104 FDFT1P37268 417 aa9.45□□□□□ -0.9
LIG1-209ENST00000596104 NAP1L1P55209 391 aaKnown RBP9.45□□□□□ -0.9
LIG1-209ENST00000596104 RBPJQ06330 500 aa9.45□□□□□ -0.9
LIG1-209ENST00000596104 TESK1Q15569 626 aa9.45□□□□□ -0.9
LIG1-209ENST00000596104 OASLQ15646 514 aaKnown RBP9.45□□□□□ -0.9
LIG1-209ENST00000596104 SYT16Q17RD7 645 aa9.45□□□□□ -0.9
LIG1-209ENST00000596104 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.45□□□□□ -0.9
LIG1-209ENST00000596104 CTSL3PQ5NE16 218 aa9.45□□□□□ -0.9
LIG1-209ENST00000596104 GARNL3Q5VVW2 1013 aa9.45□□□□□ -0.9
LIG1-209ENST00000596104 LRRC8BQ6P9F7 803 aa9.45□□□□□ -0.9
LIG1-209ENST00000596104 MYO7BQ6PIF6 2116 aa9.45□□□□□ -0.9
LIG1-209ENST00000596104 NEK10Q6ZWH5 1172 aa9.45□□□□□ -0.9
LIG1-209ENST00000596104 OTOAQ7RTW8 1153 aa9.45□□□□□ -0.9
LIG1-209ENST00000596104 LRRC6Q86X45 466 aa9.45□□□□□ -0.9
LIG1-209ENST00000596104 MPP5Q8N3R9 675 aa9.45□□□□□ -0.9
LIG1-209ENST00000596104 RNF214Q8ND24 703 aa9.45□□□□□ -0.9
LIG1-209ENST00000596104 SUN3Q8TAQ9 357 aa9.45□□□□□ -0.9
LIG1-209ENST00000596104 GSDMBQ8TAX9 411 aa9.45□□□□□ -0.9
LIG1-209ENST00000596104 ADAMTS18Q8TE60 1221 aa9.45□□□□□ -0.9
LIG1-209ENST00000596104 SKA2Q8WVK7 121 aaPredicted RBP9.45□□□□□ -0.9
LIG1-209ENST00000596104 ATG4AQ8WYN0 398 aa9.45□□□□□ -0.9
LIG1-209ENST00000596104 MMABQ96EY8 250 aaPredicted RBP9.45□□□□□ -0.9
LIG1-209ENST00000596104 YIPF2Q9BWQ6 316 aa9.45□□□□□ -0.9
LIG1-209ENST00000596104 CHRAC1Q9NRG0 131 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms