RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 ACOT9Q9Y305 439 aa12.42□□□□□ -0.42
SCAF1-202ENST00000595242 PRKAB1Q9Y478 270 aa12.42□□□□□ -0.42
SCAF1-202ENST00000595242 PCYT1BQ9Y5K3 369 aaPredicted RBP12.42□□□□□ -0.42
SCAF1-202ENST00000595242 ANKRD12Q6UB98 2062 aa12.42□□□□□ -0.42
SCAF1-202ENST00000595242 KIR2DS5A0A0G2JLQ3 304 aa12.41□□□□□ -0.42
SCAF1-202ENST00000595242 A0A0G2JNG1 304 aa12.41□□□□□ -0.42
SCAF1-202ENST00000595242 A0A1B0GTL3 188 aa12.41□□□□□ -0.42
SCAF1-202ENST00000595242 H7C0S8 307 aa12.41□□□□□ -0.42
SCAF1-202ENST00000595242 KIR2DS3K7RE56 304 aa12.41□□□□□ -0.42
SCAF1-202ENST00000595242 PHGDHO43175 533 aaKnown RBP12.41□□□□□ -0.42
SCAF1-202ENST00000595242 KIF1CO43896 1103 aaKnown RBP12.41□□□□□ -0.42
SCAF1-202ENST00000595242 SNX2O60749 519 aa12.41□□□□□ -0.42
SCAF1-202ENST00000595242 UBXN7O94888 489 aa12.41□□□□□ -0.42
SCAF1-202ENST00000595242 KLHL2O95198 593 aa12.41□□□□□ -0.42
SCAF1-202ENST00000595242 F7P08709 466 aaPredicted RBP12.41□□□□□ -0.42
SCAF1-202ENST00000595242 RALBP11234 206 aa12.41□□□□□ -0.42
SCAF1-202ENST00000595242 F3P13726 295 aa12.41□□□□□ -0.42
SCAF1-202ENST00000595242 SLC2A4P14672 509 aa12.41□□□□□ -0.42
SCAF1-202ENST00000595242 AMD1P17707 334 aa12.41□□□□□ -0.42
SCAF1-202ENST00000595242 LHCGRP22888 699 aa12.41□□□□□ -0.42
SCAF1-202ENST00000595242 PTGER4P35408 488 aa12.41□□□□□ -0.42
SCAF1-202ENST00000595242 SCNN1BP51168 640 aa12.41□□□□□ -0.42
SCAF1-202ENST00000595242 RPL26P61254 145 aaKnown RBP12.41□□□□□ -0.42
SCAF1-202ENST00000595242 TRAF2Q12933 501 aa12.41□□□□□ -0.42
SCAF1-202ENST00000595242 KIR2DS5Q14953 304 aa12.41□□□□□ -0.42
SCAF1-202ENST00000595242 CRB2Q5IJ48 1285 aa12.41□□□□□ -0.42
SCAF1-202ENST00000595242 FAM45BPQ6NSW5 357 aa12.41□□□□□ -0.42
SCAF1-202ENST00000595242 CYB5D1Q6P9G0 228 aa12.41□□□□□ -0.42
SCAF1-202ENST00000595242 CNSTQ6PJW8 725 aa12.41□□□□□ -0.42
SCAF1-202ENST00000595242 ADAMTSL4Q6UY14 1074 aa12.41□□□□□ -0.42
SCAF1-202ENST00000595242 SPNS3Q6ZMD2 512 aa12.41□□□□□ -0.42
SCAF1-202ENST00000595242 C10orf107Q8IVU9 208 aa12.41□□□□□ -0.42
SCAF1-202ENST00000595242 CEP97Q8IW35 865 aa12.41□□□□□ -0.42
SCAF1-202ENST00000595242 FAM45AQ8TCE6 357 aa12.41□□□□□ -0.42
SCAF1-202ENST00000595242 BLOC1S5Q8TDH9 187 aa12.41□□□□□ -0.42
SCAF1-202ENST00000595242 SREK1Q8WXA9 508 aaKnown RBP12.41□□□□□ -0.42
SCAF1-202ENST00000595242 ERP27Q96DN0 273 aa12.41□□□□□ -0.42
SCAF1-202ENST00000595242 DNAJC1Q96KC8 554 aaKnown RBP12.41□□□□□ -0.42
SCAF1-202ENST00000595242 SORT1Q99523 831 aa12.41□□□□□ -0.42
SCAF1-202ENST00000595242 C20orf27Q9GZN8 174 aa12.41□□□□□ -0.42
SCAF1-202ENST00000595242 SAR1AQ9NR31 198 aa12.41□□□□□ -0.42
SCAF1-202ENST00000595242 FBXO6Q9NRD1 293 aaPredicted RBP12.41□□□□□ -0.42
SCAF1-202ENST00000595242 TXLNGQ9NUQ3 528 aa12.41□□□□□ -0.42
SCAF1-202ENST00000595242 INTS10Q9NVR2 710 aaKnown RBP12.41□□□□□ -0.42
SCAF1-202ENST00000595242 CD84Q9UIB8 345 aa12.41□□□□□ -0.42
SCAF1-202ENST00000595242 HAO1Q9UJM8 370 aa12.41□□□□□ -0.42
SCAF1-202ENST00000595242 RARRES3Q9UL19 164 aa12.41□□□□□ -0.42
SCAF1-202ENST00000595242 RPL26L1Q9UNX3 145 aaKnown RBP12.41□□□□□ -0.42
SCAF1-202ENST00000595242 KCNK6Q9Y257 313 aa12.41□□□□□ -0.42
SCAF1-202ENST00000595242 NTNG1Q9Y2I2 539 aa12.41□□□□□ -0.42
SCAF1-202ENST00000595242 SPO11Q9Y5K1 396 aa12.41□□□□□ -0.42
SCAF1-202ENST00000595242 CAPN7Q9Y6W3 813 aa12.41□□□□□ -0.42
SCAF1-202ENST00000595242 PSMD11O00231 422 aa12.4□□□□□ -0.42
SCAF1-202ENST00000595242 AURKAO14965 403 aa12.4□□□□□ -0.42
SCAF1-202ENST00000595242 HNRNPCL1O60812 293 aaKnown RBP12.4□□□□□ -0.42
SCAF1-202ENST00000595242 TRIM13O60858 407 aa12.4□□□□□ -0.42
SCAF1-202ENST00000595242 UNC5CO95185 931 aa12.4□□□□□ -0.42
SCAF1-202ENST00000595242 GOT2P00505 430 aaKnown RBP12.4□□□□□ -0.42
SCAF1-202ENST00000595242 MYL2P10916 166 aa12.4□□□□□ -0.42
SCAF1-202ENST00000595242 GMPRP36959 345 aa12.4□□□□□ -0.42
SCAF1-202ENST00000595242 GLRBP48167 497 aa12.4□□□□□ -0.42
SCAF1-202ENST00000595242 SLC1A6P48664 564 aa12.4□□□□□ -0.42
SCAF1-202ENST00000595242 ABCE1P61221 599 aaKnown RBP12.4□□□□□ -0.42
SCAF1-202ENST00000595242 TUBB3Q13509 450 aa12.4□□□□□ -0.42
SCAF1-202ENST00000595242 ZNF789Q5FWF6 425 aa12.4□□□□□ -0.42
SCAF1-202ENST00000595242 RBM20Q5T481 1227 aaKnown RBP12.4□□□□□ -0.42
SCAF1-202ENST00000595242 CACHD1Q5VU97 1274 aa12.4□□□□□ -0.42
SCAF1-202ENST00000595242 LRRC8EQ6NSJ5 796 aa12.4□□□□□ -0.42
SCAF1-202ENST00000595242 MRNIPQ6NTE8 343 aa12.4□□□□□ -0.42
SCAF1-202ENST00000595242 AFTPHQ6ULP2 937 aa12.4□□□□□ -0.42
SCAF1-202ENST00000595242 ZCCHC23Q6ZST2 131 aa12.4□□□□□ -0.42
SCAF1-202ENST00000595242 FAM92BQ6ZTR7 304 aa12.4□□□□□ -0.42
SCAF1-202ENST00000595242 RAPH1Q70E73 1250 aa12.4□□□□□ -0.42
SCAF1-202ENST00000595242 MED25Q71SY5 747 aa12.4□□□□□ -0.42
SCAF1-202ENST00000595242 ASRGL1Q7L266 308 aa12.4□□□□□ -0.42
SCAF1-202ENST00000595242 PRSS42Q7Z5A4 293 aa12.4□□□□□ -0.42
SCAF1-202ENST00000595242 TECPR1Q7Z6L1 1165 aa12.4□□□□□ -0.42
SCAF1-202ENST00000595242 C10orf67Q8IYJ2 551 aa12.4□□□□□ -0.42
SCAF1-202ENST00000595242 TTC30BQ8N4P2 665 aa12.4□□□□□ -0.42
SCAF1-202ENST00000595242 TMEM102Q8N9M5 508 aaPredicted RBP12.4□□□□□ -0.42
SCAF1-202ENST00000595242 AVL9Q8NBF6 648 aa12.4□□□□□ -0.42
SCAF1-202ENST00000595242 OR13C4Q8NGS5 318 aa12.4□□□□□ -0.42
SCAF1-202ENST00000595242 PPP1R14CQ8TAE6 165 aa12.4□□□□□ -0.42
SCAF1-202ENST00000595242 PIWIL2Q8TC59 973 aaKnown RBP12.4□□□□□ -0.42
SCAF1-202ENST00000595242 KCTD4Q8WVF5 259 aa12.4□□□□□ -0.42
SCAF1-202ENST00000595242 KLHL6Q8WZ60 621 aa12.4□□□□□ -0.42
SCAF1-202ENST00000595242 AP2M1Q96CW1 435 aa12.4□□□□□ -0.42
SCAF1-202ENST00000595242 THOC1Q96FV9 657 aaKnown RBP12.4□□□□□ -0.42
SCAF1-202ENST00000595242 CDKN2AIPNLQ96HQ2 116 aa12.4□□□□□ -0.42
SCAF1-202ENST00000595242 UBXN10Q96LJ8 280 aa12.4□□□□□ -0.42
SCAF1-202ENST00000595242 FCRL4Q96PJ5 515 aa12.4□□□□□ -0.42
SCAF1-202ENST00000595242 TCF12Q99081 682 aa12.4□□□□□ -0.42
SCAF1-202ENST00000595242 ADGRE3Q9BY15 652 aa12.4□□□□□ -0.42
SCAF1-202ENST00000595242 WWP1Q9H0M0 922 aa12.4□□□□□ -0.42
SCAF1-202ENST00000595242 AGPAT4Q9NRZ5 378 aa12.4□□□□□ -0.42
SCAF1-202ENST00000595242 OXSMQ9NWU1 459 aa12.4□□□□□ -0.42
SCAF1-202ENST00000595242 MARCH4Q9P2E8 410 aaPredicted RBP12.4□□□□□ -0.42
SCAF1-202ENST00000595242 ARL5AQ9Y689 179 aa12.4□□□□□ -0.42
SCAF1-202ENST00000595242 SLC30A1Q9Y6M5 507 aa12.4□□□□□ -0.42
SCAF1-202ENST00000595242 A0A0G2JND7 137 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms