RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 NKAIN1Q4KMZ8 207 aa14.46□□□□□ -0.09
TRIM28-205ENST00000595028 CPZQ66K79 652 aa14.46□□□□□ -0.09
TRIM28-205ENST00000595028 DUPD1Q68J44 220 aa14.46□□□□□ -0.09
TRIM28-205ENST00000595028 FRMPD2BQ6IN97 320 aa14.46□□□□□ -0.09
TRIM28-205ENST00000595028 FAM45BPQ6NSW5 357 aa14.46□□□□□ -0.09
TRIM28-205ENST00000595028 PAQR7Q86WK9 346 aa14.46□□□□□ -0.09
TRIM28-205ENST00000595028 APLFQ8IW19 511 aaPredicted RBP14.46□□□□□ -0.09
TRIM28-205ENST00000595028 TTC29Q8NA56 475 aaPredicted RBP14.46□□□□□ -0.09
TRIM28-205ENST00000595028 FAM45AQ8TCE6 357 aa14.46□□□□□ -0.09
TRIM28-205ENST00000595028 C16orf45Q96MC5 204 aaPredicted RBP14.46□□□□□ -0.09
TRIM28-205ENST00000595028 OLFM1Q99784 485 aa14.46□□□□□ -0.09
TRIM28-205ENST00000595028 ZFYVE21Q9BQ24 234 aa14.46□□□□□ -0.09
TRIM28-205ENST00000595028 CUTCQ9NTM9 273 aa14.46□□□□□ -0.09
TRIM28-205ENST00000595028 MOCS1Q9NZB8 636 aa14.46□□□□□ -0.09
TRIM28-205ENST00000595028 ITPR2Q14571 2701 aa14.46□□□□□ -0.09
TRIM28-205ENST00000595028 NUP210LQ5VU65 1888 aa14.46□□□□□ -0.1
TRIM28-205ENST00000595028 PCSK5Q92824 1860 aa14.46□□□□□ -0.1
TRIM28-205ENST00000595028 DSCR3O14972 297 aa14.45□□□□□ -0.1
TRIM28-205ENST00000595028 EIF3HO15372 352 aaKnown RBP eCLIP14.45□□□□□ -0.1
TRIM28-205ENST00000595028 SLC16A5O15375 505 aa14.45□□□□□ -0.1
TRIM28-205ENST00000595028 SRPX2O60687 465 aaPredicted RBP14.45□□□□□ -0.1
TRIM28-205ENST00000595028 KLF7O75840 302 aaPredicted RBP14.45□□□□□ -0.1
TRIM28-205ENST00000595028 ITGAXP20702 1163 aa14.45□□□□□ -0.1
TRIM28-205ENST00000595028 TBPL1P62380 186 aa14.45□□□□□ -0.1
TRIM28-205ENST00000595028 ABATP80404 500 aa14.45□□□□□ -0.1
TRIM28-205ENST00000595028 PRDX1Q06830 199 aaKnown RBP14.45□□□□□ -0.1
TRIM28-205ENST00000595028 CKAP4Q07065 602 aaKnown RBP14.45□□□□□ -0.1
TRIM28-205ENST00000595028 ZNF425Q6IV72 752 aa14.45□□□□□ -0.1
TRIM28-205ENST00000595028 TTLL10Q6ZVT0 673 aa14.45□□□□□ -0.1
TRIM28-205ENST00000595028 SLC26A11Q86WA9 606 aa14.45□□□□□ -0.1
TRIM28-205ENST00000595028 MCOLN3Q8TDD5 553 aa14.45□□□□□ -0.1
TRIM28-205ENST00000595028 ABHD17AQ96GS6 310 aa14.45□□□□□ -0.1
TRIM28-205ENST00000595028 PLCD4Q9BRC7 762 aa14.45□□□□□ -0.1
TRIM28-205ENST00000595028 TRIM55Q9BYV6 548 aa14.45□□□□□ -0.1
TRIM28-205ENST00000595028 PHACTR1Q9C0D0 580 aa14.45□□□□□ -0.1
TRIM28-205ENST00000595028 RAB17Q9H0T7 212 aa14.45□□□□□ -0.1
TRIM28-205ENST00000595028 SAYSD1Q9NPB0 183 aa14.45□□□□□ -0.1
TRIM28-205ENST00000595028 CCDC177Q9NQR7 707 aaPredicted RBP14.45□□□□□ -0.1
TRIM28-205ENST00000595028 SLC22A11Q9NSA0 550 aa14.45□□□□□ -0.1
TRIM28-205ENST00000595028 STOX2Q9P2F5 926 aaPredicted RBP14.45□□□□□ -0.1
TRIM28-205ENST00000595028 IFT80Q9P2H3 777 aaPredicted RBP14.45□□□□□ -0.1
TRIM28-205ENST00000595028 NDOR1Q9UHB4 597 aa14.45□□□□□ -0.1
TRIM28-205ENST00000595028 GPN3Q9UHW5 284 aaPredicted RBP14.45□□□□□ -0.1
TRIM28-205ENST00000595028 PDE10AQ9Y233 779 aa14.45□□□□□ -0.1
TRIM28-205ENST00000595028 VWA7Q9Y334 891 aa14.45□□□□□ -0.1
TRIM28-205ENST00000595028 UTP11Q9Y3A2 253 aaKnown RBP14.45□□□□□ -0.1
TRIM28-205ENST00000595028 LOC105369274A0A096LPK9 316 aa14.44□□□□□ -0.1
TRIM28-205ENST00000595028 LOC102723532A0A0G2JNH3 316 aa14.44□□□□□ -0.1
TRIM28-205ENST00000595028 CLEC18AA5D8T8 446 aa14.44□□□□□ -0.1
TRIM28-205ENST00000595028 ARGFXA6NJG6 315 aa14.44□□□□□ -0.1
TRIM28-205ENST00000595028 CNOT3O75175 753 aaKnown RBP14.44□□□□□ -0.1
TRIM28-205ENST00000595028 DNAJB5O75953 348 aa14.44□□□□□ -0.1
TRIM28-205ENST00000595028 ATXN8OSP0DMR3 200 aa14.44□□□□□ -0.1
TRIM28-205ENST00000595028 EZRP15311 586 aaKnown RBP14.44□□□□□ -0.1
TRIM28-205ENST00000595028 FOLR3P41439 243 aa14.44□□□□□ -0.1
TRIM28-205ENST00000595028 PGGT1BP53609 377 aa14.44□□□□□ -0.1
TRIM28-205ENST00000595028 IL2P60568 153 aa14.44□□□□□ -0.1
TRIM28-205ENST00000595028 PHKG1Q16816 387 aa14.44□□□□□ -0.1
TRIM28-205ENST00000595028 LACTB2Q53H82 288 aaPredicted RBP14.44□□□□□ -0.1
TRIM28-205ENST00000595028 WASHC2DQ5SRD0 308 aa14.44□□□□□ -0.1
TRIM28-205ENST00000595028 THEMIS2Q5TEJ8 643 aa14.44□□□□□ -0.1
TRIM28-205ENST00000595028 MLIPQ5VWP3 458 aa14.44□□□□□ -0.1
TRIM28-205ENST00000595028 MRPL14Q6P1L8 145 aaKnown RBP14.44□□□□□ -0.1
TRIM28-205ENST00000595028 CLEC18BQ6UXF7 455 aa14.44□□□□□ -0.1
TRIM28-205ENST00000595028 MBOAT1Q6ZNC8 495 aa14.44□□□□□ -0.1
TRIM28-205ENST00000595028 CAPN12Q6ZSI9 719 aa14.44□□□□□ -0.1
TRIM28-205ENST00000595028 STRA8Q7Z7C7 330 aa14.44□□□□□ -0.1
TRIM28-205ENST00000595028 ZC3HC1Q86WB0 502 aaKnown RBP14.44□□□□□ -0.1
TRIM28-205ENST00000595028 RAB43Q86YS6 212 aa14.44□□□□□ -0.1
TRIM28-205ENST00000595028 PALM2Q8IXS6 379 aa14.44□□□□□ -0.1
TRIM28-205ENST00000595028 OR4N4Q8N0Y3 316 aa14.44□□□□□ -0.1
TRIM28-205ENST00000595028 CLEC18CQ8NCF0 446 aa14.44□□□□□ -0.1
TRIM28-205ENST00000595028 PYROXD1Q8WU10 500 aa14.44□□□□□ -0.1
TRIM28-205ENST00000595028 FKBP10Q96AY3 582 aa14.44□□□□□ -0.1
TRIM28-205ENST00000595028 CCDC138Q96M89 665 aa14.44□□□□□ -0.1
TRIM28-205ENST00000595028 PARVBQ9HBI1 364 aa14.44□□□□□ -0.1
TRIM28-205ENST00000595028 ZNF71Q9NQZ8 489 aaPredicted RBP14.44□□□□□ -0.1
TRIM28-205ENST00000595028 ABCF3Q9NUQ8 709 aa14.44□□□□□ -0.1
TRIM28-205ENST00000595028 CUEDC1Q9NWM3 386 aaPredicted RBP14.44□□□□□ -0.1
TRIM28-205ENST00000595028 NSMCE4AQ9NXX6 385 aa14.44□□□□□ -0.1
TRIM28-205ENST00000595028 CDC23Q9UJX2 597 aa14.44□□□□□ -0.1
TRIM28-205ENST00000595028 PTRH2Q9Y3E5 179 aaKnown RBP14.44□□□□□ -0.1
TRIM28-205ENST00000595028 FAM95CA0A1B0GW59 222 aa14.43□□□□□ -0.1
TRIM28-205ENST00000595028 H0YGG7 62 aa14.43□□□□□ -0.1
TRIM28-205ENST00000595028 MKRN2OSH3BPM6 223 aa14.43□□□□□ -0.1
TRIM28-205ENST00000595028 ONECUT2O95948 504 aa14.43□□□□□ -0.1
TRIM28-205ENST00000595028 CD63P08962 238 aa14.43□□□□□ -0.1
TRIM28-205ENST00000595028 ZNF37AP17032 561 aaPredicted RBP14.43□□□□□ -0.1
TRIM28-205ENST00000595028 ALAS2P22557 587 aa14.43□□□□□ -0.1
TRIM28-205ENST00000595028 ARF3P61204 181 aaPredicted RBP14.43□□□□□ -0.1
TRIM28-205ENST00000595028 CAV1Q03135 178 aa14.43□□□□□ -0.1
TRIM28-205ENST00000595028 CHAF1BQ13112 559 aa14.43□□□□□ -0.1
TRIM28-205ENST00000595028 PRAMEF13Q5VWM6 474 aa14.43□□□□□ -0.1
TRIM28-205ENST00000595028 AGTRAPQ6RW13 159 aa14.43□□□□□ -0.1
TRIM28-205ENST00000595028 MRGPREQ86SM8 312 aa14.43□□□□□ -0.1
TRIM28-205ENST00000595028 OR2Y1Q8NGV0 311 aa14.43□□□□□ -0.1
TRIM28-205ENST00000595028 PSMG3-AS1Q96PY0 264 aa14.43□□□□□ -0.1
TRIM28-205ENST00000595028 MCMBPQ9BTE3 642 aa14.43□□□□□ -0.1
TRIM28-205ENST00000595028 RHOJQ9H4E5 214 aa14.43□□□□□ -0.1
TRIM28-205ENST00000595028 SYNPO2LQ9H987 977 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms