RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 CSNK1A1LQ8N752 337 aa17.11■□□□□ 0.33
CIRBP-243ENST00000593128 OR11G2Q8NGC1 345 aa17.11■□□□□ 0.33
CIRBP-243ENST00000593128 MAGOHBQ96A72 148 aaKnown RBP17.11■□□□□ 0.33
CIRBP-243ENST00000593128 NACC2Q96BF6 587 aa17.11■□□□□ 0.33
CIRBP-243ENST00000593128 PKP4Q99569 1192 aa17.11■□□□□ 0.33
CIRBP-243ENST00000593128 AGPAT4Q9NRZ5 378 aa17.11■□□□□ 0.33
CIRBP-243ENST00000593128 NOVA2Q9UNW9 492 aaKnown RBP17.11■□□□□ 0.33
CIRBP-243ENST00000593128 VPS9D1Q9Y2B5 631 aa17.11■□□□□ 0.33
CIRBP-243ENST00000593128 NTNG1Q9Y2I2 539 aa17.11■□□□□ 0.33
CIRBP-243ENST00000593128 DOCK10Q96BY6 2186 aa17.11■□□□□ 0.33
CIRBP-243ENST00000593128 ICE1Q9Y2F5 2266 aa17.1■□□□□ 0.33
CIRBP-243ENST00000593128 MDC1Q14676 2089 aaKnown RBP17.1■□□□□ 0.33
CIRBP-243ENST00000593128 CBX6O95503 412 aa17.1■□□□□ 0.33
CIRBP-243ENST00000593128 ONECUT2O95948 504 aa17.1■□□□□ 0.33
CIRBP-243ENST00000593128 PNLIPRP1P54315 467 aa17.1■□□□□ 0.33
CIRBP-243ENST00000593128 CTBP1Q13363 440 aa17.1■□□□□ 0.33
CIRBP-243ENST00000593128 HKDC1Q2TB90 917 aa17.1■□□□□ 0.33
CIRBP-243ENST00000593128 PRMT9Q6P2P2 845 aa17.1■□□□□ 0.33
CIRBP-243ENST00000593128 FBXO42Q6P3S6 717 aa17.1■□□□□ 0.33
CIRBP-243ENST00000593128 TTC27Q6P3X3 843 aa17.1■□□□□ 0.33
CIRBP-243ENST00000593128 CAND1Q86VP6 1230 aaKnown RBP17.1■□□□□ 0.33
CIRBP-243ENST00000593128 DENND6AQ8IWF6 608 aa17.1■□□□□ 0.33
CIRBP-243ENST00000593128 RERGQ96A58 199 aaPredicted RBP17.1■□□□□ 0.33
CIRBP-243ENST00000593128 MMABQ96EY8 250 aaPredicted RBP17.1■□□□□ 0.33
CIRBP-243ENST00000593128 MS4A14Q96JA4 679 aa17.1■□□□□ 0.33
CIRBP-243ENST00000593128 C10orf90Q96M02 699 aa17.1■□□□□ 0.33
CIRBP-243ENST00000593128 SLC30A3Q99726 388 aa17.1■□□□□ 0.33
CIRBP-243ENST00000593128 INTS10Q9NVR2 710 aaKnown RBP17.1■□□□□ 0.33
CIRBP-243ENST00000593128 TRPC4Q9UBN4 977 aa17.1■□□□□ 0.33
CIRBP-243ENST00000593128 PCYOX1Q9UHG3 505 aa17.1■□□□□ 0.33
CIRBP-243ENST00000593128 ERRFI1Q9UJM3 462 aaPredicted RBP17.1■□□□□ 0.33
CIRBP-243ENST00000593128 MAD1L1Q9Y6D9 718 aa17.1■□□□□ 0.33
CIRBP-243ENST00000593128 OR2A25A4D2G3 310 aa17.09■□□□□ 0.33
CIRBP-243ENST00000593128 VSTM2BA6NLU5 285 aa17.09■□□□□ 0.33
CIRBP-243ENST00000593128 MYO1CO00159 1063 aa17.09■□□□□ 0.33
CIRBP-243ENST00000593128 PSIP1O75475 530 aaKnown RBP17.09■□□□□ 0.33
CIRBP-243ENST00000593128 CCNDBP1O95273 360 aa17.09■□□□□ 0.33
CIRBP-243ENST00000593128 DDAH2O95865 285 aa17.09■□□□□ 0.33
CIRBP-243ENST00000593128 STATHP02808 62 aa17.09■□□□□ 0.33
CIRBP-243ENST00000593128 ANXA5P08758 320 aa17.09■□□□□ 0.33
CIRBP-243ENST00000593128 EEF1A2Q05639 463 aaKnown RBP17.09■□□□□ 0.33
CIRBP-243ENST00000593128 GBX1Q14549 363 aa17.09■□□□□ 0.33
CIRBP-243ENST00000593128 ICE2Q659A1 982 aa17.09■□□□□ 0.33
CIRBP-243ENST00000593128 LAPTM4BQ86VI4 370 aa17.09■□□□□ 0.33
CIRBP-243ENST00000593128 LRRC8AQ8IWT6 810 aa17.09■□□□□ 0.33
CIRBP-243ENST00000593128 REXO1L1PQ8IX06 675 aa17.09■□□□□ 0.33
CIRBP-243ENST00000593128 PPP4R1Q8TF05 950 aa17.09■□□□□ 0.33
CIRBP-243ENST00000593128 C5orf34Q96MH7 638 aa17.09■□□□□ 0.33
CIRBP-243ENST00000593128 PLCD4Q9BRC7 762 aa17.09■□□□□ 0.33
CIRBP-243ENST00000593128 C20orf96Q9NUD7 363 aaPredicted RBP17.09■□□□□ 0.33
CIRBP-243ENST00000593128 UTP6Q9NYH9 597 aaKnown RBP17.09■□□□□ 0.33
CIRBP-243ENST00000593128 CDC14AQ9UNH5 594 aa17.09■□□□□ 0.33
CIRBP-243ENST00000593128 RUVBL1Q9Y265 456 aaKnown RBP17.09■□□□□ 0.33
CIRBP-243ENST00000593128 KLK4Q9Y5K2 254 aa17.09■□□□□ 0.33
CIRBP-243ENST00000593128 NBPF19A0A087WUL8 3843 aa17.08■□□□□ 0.32
CIRBP-243ENST00000593128 NSG1A0A0A6YYJ2 146 aa17.08■□□□□ 0.32
CIRBP-243ENST00000593128 SDR42E2A6NKP2 422 aa17.08■□□□□ 0.32
CIRBP-243ENST00000593128 ZNF839A8K0R7 811 aa17.08■□□□□ 0.32
CIRBP-243ENST00000593128 SMAPO00193 183 aa17.08■□□□□ 0.32
CIRBP-243ENST00000593128 NRDCO43847 1150 aa17.08■□□□□ 0.32
CIRBP-243ENST00000593128 KIF5CO60282 957 aa17.08■□□□□ 0.32
CIRBP-243ENST00000593128 SLC16A8O95907 504 aa17.08■□□□□ 0.32
CIRBP-243ENST00000593128 HPP00738 406 aa17.08■□□□□ 0.32
CIRBP-243ENST00000593128 CXCR2P25025 360 aa17.08■□□□□ 0.32
CIRBP-243ENST00000593128 COL8A1P27658 744 aa17.08■□□□□ 0.32
CIRBP-243ENST00000593128 CLCN7P51798 805 aa17.08■□□□□ 0.32
CIRBP-243ENST00000593128 EMP2P54851 167 aa17.08■□□□□ 0.32
CIRBP-243ENST00000593128 ADARP55265 1226 aaKnown RBP17.08■□□□□ 0.32
CIRBP-243ENST00000593128 Q0VFX4 171 aa17.08■□□□□ 0.32
CIRBP-243ENST00000593128 ZNF169Q14929 603 aaPredicted RBP17.08■□□□□ 0.32
CIRBP-243ENST00000593128 ZNF662Q6ZS27 426 aa17.08■□□□□ 0.32
CIRBP-243ENST00000593128 PAQR7Q86WK9 346 aa17.08■□□□□ 0.32
CIRBP-243ENST00000593128 PLD3Q8IV08 490 aa17.08■□□□□ 0.32
CIRBP-243ENST00000593128 MAGEB10Q96LZ2 347 aaPredicted RBP17.08■□□□□ 0.32
CIRBP-243ENST00000593128 PTGFRNQ9P2B2 879 aa17.08■□□□□ 0.32
CIRBP-243ENST00000593128 SLC5A6Q9Y289 635 aa17.08■□□□□ 0.32
CIRBP-243ENST00000593128 PPP2R2CQ9Y2T4 447 aa17.08■□□□□ 0.32
CIRBP-243ENST00000593128 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.07■□□□□ 0.32
CIRBP-243ENST00000593128 A0A0A6YYC8 382 aaPredicted RBP17.07■□□□□ 0.32
CIRBP-243ENST00000593128 IGKV1-8A0A0C4DH67 115 aa17.07■□□□□ 0.32
CIRBP-243ENST00000593128 I3L1I5 382 aaPredicted RBP17.07■□□□□ 0.32
CIRBP-243ENST00000593128 PRPF4O43172 522 aaKnown RBP eCLIP17.07■□□□□ 0.324e-9■■□□□ 12.1
CIRBP-243ENST00000593128 HEXBP07686 556 aa17.07■□□□□ 0.32
CIRBP-243ENST00000593128 ERGP11308 486 aa17.07■□□□□ 0.32
CIRBP-243ENST00000593128 SLC1A2P43004 574 aa17.07■□□□□ 0.32
CIRBP-243ENST00000593128 ARG2P78540 354 aa17.07■□□□□ 0.32
CIRBP-243ENST00000593128 MPP1Q00013 466 aa17.07■□□□□ 0.32
CIRBP-243ENST00000593128 PRTGQ2VWP7 1150 aa17.07■□□□□ 0.32
CIRBP-243ENST00000593128 ISLR2Q6UXK2 745 aa17.07■□□□□ 0.32
CIRBP-243ENST00000593128 KBTBD2Q8IY47 623 aa17.07■□□□□ 0.32
CIRBP-243ENST00000593128 CPNE9Q8IYJ1 553 aa17.07■□□□□ 0.32
CIRBP-243ENST00000593128 CATSPER1Q8NEC5 780 aa17.07■□□□□ 0.32
CIRBP-243ENST00000593128 GIMAP7Q8NHV1 300 aa17.07■□□□□ 0.32
CIRBP-243ENST00000593128 GRHL3Q8TE85 626 aa17.07■□□□□ 0.32
CIRBP-243ENST00000593128 ZNF480Q8WV37 535 aa17.07■□□□□ 0.32
CIRBP-243ENST00000593128 SYNPO2LQ9H987 977 aa17.07■□□□□ 0.32
CIRBP-243ENST00000593128 XAB2Q9HCS7 855 aaKnown RBP17.07■□□□□ 0.32
CIRBP-243ENST00000593128 FAM237BA0A1B0GVD1 139 aa17.06■□□□□ 0.32
CIRBP-243ENST00000593128 MAGEB16A2A368 324 aa17.06■□□□□ 0.32
CIRBP-243ENST00000593128 IDSB3KWA1 339 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms