RNA–Protein interactions for RNA: ENST00000591547.5

RETREG3-211, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-211ENST00000591547 PSMF1Q92530 271 aa9.4□□□□□ -0.9
RETREG3-211ENST00000591547 ZNF669Q96BR6 464 aaPredicted RBP9.4□□□□□ -0.9
RETREG3-211ENST00000591547 DCUN1D1Q96GG9 259 aa9.4□□□□□ -0.9
RETREG3-211ENST00000591547 TRIM56Q9BRZ2 755 aaKnown RBP9.4□□□□□ -0.9
RETREG3-211ENST00000591547 MRM3Q9HC36 420 aaKnown RBP9.4□□□□□ -0.9
RETREG3-211ENST00000591547 CHST11Q9NPF2 352 aa9.4□□□□□ -0.9
RETREG3-211ENST00000591547 EURLQ9NYK6 297 aa9.4□□□□□ -0.9
RETREG3-211ENST00000591547 BFARQ9NZS9 450 aa9.4□□□□□ -0.9
RETREG3-211ENST00000591547 WHRNQ9P202 907 aa9.4□□□□□ -0.9
RETREG3-211ENST00000591547 SUCOQ9UBS9 1254 aaKnown RBP9.4□□□□□ -0.9
RETREG3-211ENST00000591547 CRLS1Q9UJA2 301 aa9.4□□□□□ -0.9
RETREG3-211ENST00000591547 SOX13Q9UN79 622 aa9.4□□□□□ -0.9
RETREG3-211ENST00000591547 PLCL2Q9UPR0 1127 aa9.4□□□□□ -0.9
RETREG3-211ENST00000591547 MAU2Q9Y6X3 613 aa9.4□□□□□ -0.9
RETREG3-211ENST00000591547 MTORP42345 2549 aa9.4□□□□□ -0.91
RETREG3-211ENST00000591547 CPAMD8Q8IZJ3 1885 aa9.39□□□□□ -0.91
RETREG3-211ENST00000591547 A0A0J9YY10 115 aa9.39□□□□□ -0.91
RETREG3-211ENST00000591547 MROH6A6NGR9 719 aa9.39□□□□□ -0.91
RETREG3-211ENST00000591547 BHMG1C9JSJ3 638 aaPredicted RBP9.39□□□□□ -0.91
RETREG3-211ENST00000591547 H7C0S8 307 aa9.39□□□□□ -0.91
RETREG3-211ENST00000591547 IFRD1O00458 451 aaPredicted RBP9.39□□□□□ -0.91
RETREG3-211ENST00000591547 FFAR3O14843 346 aa9.39□□□□□ -0.91
RETREG3-211ENST00000591547 GPR42O15529 346 aa9.39□□□□□ -0.91
RETREG3-211ENST00000591547 AVILO75366 819 aa9.39□□□□□ -0.91
RETREG3-211ENST00000591547 CD63P08962 238 aa9.39□□□□□ -0.91
RETREG3-211ENST00000591547 ATP1B2P14415 290 aaPredicted RBP9.39□□□□□ -0.91
RETREG3-211ENST00000591547 MAGP20916 626 aa9.39□□□□□ -0.91
RETREG3-211ENST00000591547 ADRA1DP25100 572 aa9.39□□□□□ -0.91
RETREG3-211ENST00000591547 CA7P43166 264 aa9.39□□□□□ -0.91
RETREG3-211ENST00000591547 TNFSF10P50591 281 aa9.39□□□□□ -0.91
RETREG3-211ENST00000591547 ARL4CP56559 192 aa9.39□□□□□ -0.91
RETREG3-211ENST00000591547 GUCY2DQ02846 1103 aa9.39□□□□□ -0.91
RETREG3-211ENST00000591547 ACVR1Q04771 509 aa9.39□□□□□ -0.91
RETREG3-211ENST00000591547 DHX9Q08211 1270 aaKnown RBP9.39□□□□□ -0.91
RETREG3-211ENST00000591547 C3AR1Q16581 482 aa9.39□□□□□ -0.91
RETREG3-211ENST00000591547 GLE1Q53GS7 698 aaKnown RBP9.39□□□□□ -0.91
RETREG3-211ENST00000591547 DNAJC21Q5F1R6 531 aaKnown RBP9.39□□□□□ -0.91
RETREG3-211ENST00000591547 PCID2Q5JVF3 399 aa9.39□□□□□ -0.91
RETREG3-211ENST00000591547 ARMC3Q5W041 872 aa9.39□□□□□ -0.91
RETREG3-211ENST00000591547 TLDC1Q6P9B6 456 aa9.39□□□□□ -0.91
RETREG3-211ENST00000591547 AFTPHQ6ULP2 937 aa9.39□□□□□ -0.91
RETREG3-211ENST00000591547 ZDHHC24Q6UX98 284 aa9.39□□□□□ -0.91
RETREG3-211ENST00000591547 TAX1BP1Q86VP1 789 aa9.39□□□□□ -0.91
RETREG3-211ENST00000591547 MCATQ8IVS2 390 aaKnown RBP9.39□□□□□ -0.91
RETREG3-211ENST00000591547 OR13J1Q8NGT2 312 aa9.39□□□□□ -0.91
RETREG3-211ENST00000591547 BRIX1Q8TDN6 353 aaKnown RBP9.39□□□□□ -0.91
RETREG3-211ENST00000591547 PEX13Q92968 403 aa9.39□□□□□ -0.91
RETREG3-211ENST00000591547 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.39□□□□□ -0.91
RETREG3-211ENST00000591547 PWWP2AQ96N64 755 aa9.39□□□□□ -0.91
RETREG3-211ENST00000591547 C19orf43Q9BQ61 176 aa9.39□□□□□ -0.91
RETREG3-211ENST00000591547 WDR83Q9BRX9 315 aaKnown RBP9.39□□□□□ -0.91
RETREG3-211ENST00000591547 MVB12BQ9H7P6 319 aa9.39□□□□□ -0.91
RETREG3-211ENST00000591547 TREX1Q9NSU2 369 aa9.39□□□□□ -0.91
RETREG3-211ENST00000591547 NLE1Q9NVX2 485 aaPredicted RBP9.39□□□□□ -0.91
RETREG3-211ENST00000591547 SAMD15Q9P1V8 674 aa9.39□□□□□ -0.91
RETREG3-211ENST00000591547 SEC14L3Q9UDX4 400 aa9.39□□□□□ -0.91
RETREG3-211ENST00000591547 SLC2A6Q9UGQ3 507 aa9.39□□□□□ -0.91
RETREG3-211ENST00000591547 DMGDHQ9UI17 866 aaKnown RBP9.39□□□□□ -0.91
RETREG3-211ENST00000591547 TINAGQ9UJW2 476 aa9.39□□□□□ -0.91
RETREG3-211ENST00000591547 RIMKLBQ9ULI2 386 aa9.39□□□□□ -0.91
RETREG3-211ENST00000591547 CHMP2BQ9UQN3 213 aa9.39□□□□□ -0.91
RETREG3-211ENST00000591547 PRSS21Q9Y6M0 314 aa9.39□□□□□ -0.91
RETREG3-211ENST00000591547 NCOA6Q14686 2063 aaPredicted RBP9.39□□□□□ -0.91
RETREG3-211ENST00000591547 PCNX1Q96RV3 2341 aa9.39□□□□□ -0.91
RETREG3-211ENST00000591547 C17orf113A0A1B0GUU1 675 aa9.38□□□□□ -0.91
RETREG3-211ENST00000591547 AGAP14A8MT82 685 aa9.38□□□□□ -0.91
RETREG3-211ENST00000591547 E7ESA3 106 aa9.38□□□□□ -0.91
RETREG3-211ENST00000591547 SLU7O95391 586 aaKnown RBP9.38□□□□□ -0.91
RETREG3-211ENST00000591547 HOXB4P17483 251 aaPredicted RBP9.38□□□□□ -0.91
RETREG3-211ENST00000591547 ITGALP20701 1170 aa9.38□□□□□ -0.91
RETREG3-211ENST00000591547 PSMA3P25788 255 aa9.38□□□□□ -0.91
RETREG3-211ENST00000591547 NMBRP28336 390 aa9.38□□□□□ -0.91
RETREG3-211ENST00000591547 MC4RP32245 332 aa9.38□□□□□ -0.91
RETREG3-211ENST00000591547 FOXN2P32314 431 aa9.38□□□□□ -0.91
RETREG3-211ENST00000591547 SOX11P35716 441 aa9.38□□□□□ -0.91
RETREG3-211ENST00000591547 NPY2RP49146 381 aa9.38□□□□□ -0.91
RETREG3-211ENST00000591547 TLE4Q04727 773 aa9.38□□□□□ -0.91
RETREG3-211ENST00000591547 BBS9Q3SYG4 887 aa9.38□□□□□ -0.91
RETREG3-211ENST00000591547 MSS51Q4VC12 460 aa9.38□□□□□ -0.91
RETREG3-211ENST00000591547 FCRL6Q6DN72 434 aa9.38□□□□□ -0.91
RETREG3-211ENST00000591547 KIAA0930Q6ICG6 404 aaPredicted RBP9.38□□□□□ -0.91
RETREG3-211ENST00000591547 CASC4Q6P4E1 433 aa9.38□□□□□ -0.91
RETREG3-211ENST00000591547 SPNS3Q6ZMD2 512 aa9.38□□□□□ -0.91
RETREG3-211ENST00000591547 NLRP9Q7RTR0 991 aa9.38□□□□□ -0.91
RETREG3-211ENST00000591547 LAPTM4BQ86VI4 370 aa9.38□□□□□ -0.91
RETREG3-211ENST00000591547 PDIK1LQ8N165 341 aa9.38□□□□□ -0.91
RETREG3-211ENST00000591547 FBXO25Q8TCJ0 367 aa9.38□□□□□ -0.91
RETREG3-211ENST00000591547 ADAMTS18Q8TE60 1221 aa9.38□□□□□ -0.91
RETREG3-211ENST00000591547 FKBP10Q96AY3 582 aa9.38□□□□□ -0.91
RETREG3-211ENST00000591547 ZNF778Q96MU6 729 aa9.38□□□□□ -0.91
RETREG3-211ENST00000591547 LMF1Q96S06 567 aa9.38□□□□□ -0.91
RETREG3-211ENST00000591547 COPS8Q99627 209 aa9.38□□□□□ -0.91
RETREG3-211ENST00000591547 KIFC1Q9BW19 673 aa9.38□□□□□ -0.91
RETREG3-211ENST00000591547 PHACTR1Q9C0D0 580 aa9.38□□□□□ -0.91
RETREG3-211ENST00000591547 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.38□□□□□ -0.91
RETREG3-211ENST00000591547 WDR54Q9H977 334 aa9.38□□□□□ -0.91
RETREG3-211ENST00000591547 FAM114A2Q9NRY5 505 aa9.38□□□□□ -0.91
RETREG3-211ENST00000591547 SEMA3GQ9NS98 782 aa9.38□□□□□ -0.91
RETREG3-211ENST00000591547 CUTCQ9NTM9 273 aa9.38□□□□□ -0.91
RETREG3-211ENST00000591547 ANAPC5Q9UJX4 755 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms