RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 UQCRHP07919 91 aa9.07□□□□□ -0.96
BRCA1-226ENST00000591534 CHRM5P08912 532 aaPredicted RBP9.07□□□□□ -0.96
BRCA1-226ENST00000591534 CBSLP0DN79 551 aa9.07□□□□□ -0.96
BRCA1-226ENST00000591534 PVRP15151 417 aa9.07□□□□□ -0.96
BRCA1-226ENST00000591534 ITGA3P26006 1051 aa9.07□□□□□ -0.96
BRCA1-226ENST00000591534 PDHA2P29803 388 aa9.07□□□□□ -0.96
BRCA1-226ENST00000591534 CBSP35520 551 aa9.07□□□□□ -0.96
BRCA1-226ENST00000591534 COILP38432 576 aaPredicted RBP9.07□□□□□ -0.96
BRCA1-226ENST00000591534 CDK16Q00536 496 aa9.07□□□□□ -0.96
BRCA1-226ENST00000591534 SLC5A12Q1EHB4 618 aa9.07□□□□□ -0.96
BRCA1-226ENST00000591534 PARP6Q2NL67 630 aa9.07□□□□□ -0.96
BRCA1-226ENST00000591534 P3H1Q32P28 736 aa9.07□□□□□ -0.96
BRCA1-226ENST00000591534 DNAJC21Q5F1R6 531 aaKnown RBP9.07□□□□□ -0.96
BRCA1-226ENST00000591534 ZC3H12BQ5HYM0 836 aaKnown RBP9.07□□□□□ -0.96
BRCA1-226ENST00000591534 FAM69BQ5VUD6 431 aa9.07□□□□□ -0.96
BRCA1-226ENST00000591534 AGAP7PQ5VUJ5 663 aa9.07□□□□□ -0.96
BRCA1-226ENST00000591534 ZNF385CQ66K41 422 aaPredicted RBP9.07□□□□□ -0.96
BRCA1-226ENST00000591534 HIST2H2BCQ6DN03 193 aa9.07□□□□□ -0.96
BRCA1-226ENST00000591534 TTC23LQ6PF05 361 aa9.07□□□□□ -0.96
BRCA1-226ENST00000591534 UNC5AQ6ZN44 842 aa9.07□□□□□ -0.96
BRCA1-226ENST00000591534 Q6ZS92 163 aa9.07□□□□□ -0.96
BRCA1-226ENST00000591534 LINC00523Q86TU6 105 aa9.07□□□□□ -0.96
BRCA1-226ENST00000591534 RAB42Q8N4Z0 105 aa9.07□□□□□ -0.96
BRCA1-226ENST00000591534 ZNF655Q8N720 491 aaPredicted RBP9.07□□□□□ -0.96
BRCA1-226ENST00000591534 ST6GALNAC3Q8NDV1 305 aa9.07□□□□□ -0.96
BRCA1-226ENST00000591534 OR5K2Q8NHB8 316 aa9.07□□□□□ -0.96
BRCA1-226ENST00000591534 ZNF417Q8TAU3 575 aa9.07□□□□□ -0.96
BRCA1-226ENST00000591534 CCDC110Q8TBZ0 833 aa9.07□□□□□ -0.96
BRCA1-226ENST00000591534 ELMO1Q92556 727 aa9.07□□□□□ -0.96
BRCA1-226ENST00000591534 FKBP10Q96AY3 582 aa9.07□□□□□ -0.96
BRCA1-226ENST00000591534 C19orf60Q96EN9 201 aa9.07□□□□□ -0.96
BRCA1-226ENST00000591534 AGAP4Q96P64 663 aa9.07□□□□□ -0.96
BRCA1-226ENST00000591534 GBP5Q96PP8 586 aa9.07□□□□□ -0.96
BRCA1-226ENST00000591534 OR2A14Q96R47 310 aa9.07□□□□□ -0.96
BRCA1-226ENST00000591534 ZNF587Q96SQ5 575 aaPredicted RBP9.07□□□□□ -0.96
BRCA1-226ENST00000591534 KRT12Q99456 494 aa9.07□□□□□ -0.96
BRCA1-226ENST00000591534 WDR77Q9BQA1 342 aaPredicted RBP9.07□□□□□ -0.96
BRCA1-226ENST00000591534 EPS8L2Q9H6S3 715 aa9.07□□□□□ -0.96
BRCA1-226ENST00000591534 ZNF552Q9H707 407 aaPredicted RBP9.07□□□□□ -0.96
BRCA1-226ENST00000591534 WDR54Q9H977 334 aa9.07□□□□□ -0.96
BRCA1-226ENST00000591534 MRM3Q9HC36 420 aaKnown RBP9.07□□□□□ -0.96
BRCA1-226ENST00000591534 ERRFI1Q9UJM3 462 aaPredicted RBP9.07□□□□□ -0.96
BRCA1-226ENST00000591534 ICKQ9UPZ9 632 aa9.07□□□□□ -0.96
BRCA1-226ENST00000591534 TDRKHQ9Y2W6 561 aaKnown RBP9.07□□□□□ -0.96
BRCA1-226ENST00000591534 MYO9AB2RTY4 2548 aa9.06□□□□□ -0.96
BRCA1-226ENST00000591534 ERI2A8K979 691 aaKnown RBP9.06□□□□□ -0.96
BRCA1-226ENST00000591534 ATP8B1O43520 1251 aa9.06□□□□□ -0.96
BRCA1-226ENST00000591534 B3GALT4O96024 378 aa9.06□□□□□ -0.96
BRCA1-226ENST00000591534 MMP11P24347 488 aa9.06□□□□□ -0.96
BRCA1-226ENST00000591534 GMPRP36959 345 aa9.06□□□□□ -0.96
BRCA1-226ENST00000591534 DCTP40126 519 aa9.06□□□□□ -0.96
BRCA1-226ENST00000591534 SPARCL1Q14515 664 aa9.06□□□□□ -0.96
BRCA1-226ENST00000591534 SLMAPQ14BN4 828 aa9.06□□□□□ -0.96
BRCA1-226ENST00000591534 FAM214AQ32MH5 1076 aa9.06□□□□□ -0.96
BRCA1-226ENST00000591534 TCTE1Q5JU00 501 aa9.06□□□□□ -0.96
BRCA1-226ENST00000591534 PRAMEF13Q5VWM6 474 aa9.06□□□□□ -0.96
BRCA1-226ENST00000591534 B3GNTL1Q67FW5 361 aaPredicted RBP9.06□□□□□ -0.96
BRCA1-226ENST00000591534 FCRL6Q6DN72 434 aa9.06□□□□□ -0.96
BRCA1-226ENST00000591534 EMBQ6PCB8 327 aa9.06□□□□□ -0.96
BRCA1-226ENST00000591534 LYPD4Q6UWN0 246 aa9.06□□□□□ -0.96
BRCA1-226ENST00000591534 PACS1Q6VY07 963 aa9.06□□□□□ -0.96
BRCA1-226ENST00000591534 CHSY3Q70JA7 882 aa9.06□□□□□ -0.96
BRCA1-226ENST00000591534 TAB3Q8N5C8 712 aaPredicted RBP9.06□□□□□ -0.96
BRCA1-226ENST00000591534 CLDN19Q8N6F1 224 aa9.06□□□□□ -0.96
BRCA1-226ENST00000591534 OR5AR1Q8NGP9 310 aa9.06□□□□□ -0.96
BRCA1-226ENST00000591534 GSDMBQ8TAX9 411 aa9.06□□□□□ -0.96
BRCA1-226ENST00000591534 PPP4R1Q8TF05 950 aa9.06□□□□□ -0.96
BRCA1-226ENST00000591534 NAT14Q8WUY8 206 aa9.06□□□□□ -0.96
BRCA1-226ENST00000591534 MOCOSQ96EN8 888 aa9.06□□□□□ -0.96
BRCA1-226ENST00000591534 CDKN2AIPNLQ96HQ2 116 aa9.06□□□□□ -0.96
BRCA1-226ENST00000591534 EAF1Q96JC9 268 aaPredicted RBP9.06□□□□□ -0.96
BRCA1-226ENST00000591534 DNAJC1Q96KC8 554 aaKnown RBP9.06□□□□□ -0.96
BRCA1-226ENST00000591534 ERP44Q9BS26 406 aa9.06□□□□□ -0.96
BRCA1-226ENST00000591534 SPRTNQ9H040 489 aaPredicted RBP9.06□□□□□ -0.96
BRCA1-226ENST00000591534 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.06□□□□□ -0.96
BRCA1-226ENST00000591534 WHRNQ9P202 907 aa9.06□□□□□ -0.96
BRCA1-226ENST00000591534 PAK5Q9P286 719 aa9.06□□□□□ -0.96
BRCA1-226ENST00000591534 DHCR7Q9UBM7 475 aaKnown RBP9.06□□□□□ -0.96
BRCA1-226ENST00000591534 NBPF19A0A087WUL8 3843 aa9.05□□□□□ -0.96
BRCA1-226ENST00000591534 A0A1B0GX78 115 aa9.05□□□□□ -0.96
BRCA1-226ENST00000591534 LIASO43766 372 aa9.05□□□□□ -0.96
BRCA1-226ENST00000591534 FKBP9O95302 570 aa9.05□□□□□ -0.96
BRCA1-226ENST00000591534 RAB28P51157 221 aa9.05□□□□□ -0.96
BRCA1-226ENST00000591534 ILF2Q12905 390 aaKnown RBP9.05□□□□□ -0.96
BRCA1-226ENST00000591534 MSLNQ13421 630 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-226ENST00000591534 PWP1Q13610 501 aa9.05□□□□□ -0.96
BRCA1-226ENST00000591534 GRM7Q14831 915 aa9.05□□□□□ -0.96
BRCA1-226ENST00000591534 POU6F1Q14863 301 aa9.05□□□□□ -0.96
BRCA1-226ENST00000591534 NAA25Q14CX7 972 aa9.05□□□□□ -0.96
BRCA1-226ENST00000591534 DEFB110Q30KQ9 67 aa9.05□□□□□ -0.96
BRCA1-226ENST00000591534 ZNF658BQ4V348 819 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-226ENST00000591534 DENND5AQ6IQ26 1287 aa9.05□□□□□ -0.96
BRCA1-226ENST00000591534 TTLL10Q6ZVT0 673 aa9.05□□□□□ -0.96
BRCA1-226ENST00000591534 NLRP9Q7RTR0 991 aa9.05□□□□□ -0.96
BRCA1-226ENST00000591534 OVCH1Q7RTY7 1134 aa9.05□□□□□ -0.96
BRCA1-226ENST00000591534 PPP1R32Q7Z5V6 425 aa9.05□□□□□ -0.96
BRCA1-226ENST00000591534 PRUNE1Q86TP1 453 aa9.05□□□□□ -0.96
BRCA1-226ENST00000591534 TRIM73Q86UV7 250 aa9.05□□□□□ -0.96
BRCA1-226ENST00000591534 MCATQ8IVS2 390 aaKnown RBP9.05□□□□□ -0.96
BRCA1-226ENST00000591534 KLHL7Q8IXQ5 586 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms