RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 NDNQ99608 321 aa10.77□□□□□ -0.69
SMAD4-211ENST00000590499 ACTR5Q9H9F9 607 aaPredicted RBP10.77□□□□□ -0.69
SMAD4-211ENST00000590499 FAM114A2Q9NRY5 505 aa10.77□□□□□ -0.69
SMAD4-211ENST00000590499 PCMTD2Q9NV79 361 aa10.77□□□□□ -0.69
SMAD4-211ENST00000590499 MOCS1Q9NZB8 636 aa10.77□□□□□ -0.69
SMAD4-211ENST00000590499 SERTAD3Q9UJW9 196 aa10.77□□□□□ -0.69
SMAD4-211ENST00000590499 KLHL20Q9Y2M5 609 aa10.77□□□□□ -0.69
SMAD4-211ENST00000590499 SPENQ96T58 3664 aaKnown RBP10.77□□□□□ -0.69
SMAD4-211ENST00000590499 MED13Q9UHV7 2174 aa10.77□□□□□ -0.69
SMAD4-211ENST00000590499 E7EQ34 232 aa10.76□□□□□ -0.69
SMAD4-211ENST00000590499 VPS26AO75436 327 aa10.76□□□□□ -0.69
SMAD4-211ENST00000590499 TSPAN12O95859 305 aa10.76□□□□□ -0.69
SMAD4-211ENST00000590499 RECKO95980 971 aa10.76□□□□□ -0.69
SMAD4-211ENST00000590499 CATP04040 527 aaKnown RBP10.76□□□□□ -0.69
SMAD4-211ENST00000590499 CAPN1P07384 714 aa10.76□□□□□ -0.69
SMAD4-211ENST00000590499 TCN2P20062 427 aa10.76□□□□□ -0.69
SMAD4-211ENST00000590499 CYP2A7P20853 494 aa10.76□□□□□ -0.69
SMAD4-211ENST00000590499 MCM3P25205 808 aa10.76□□□□□ -0.69
SMAD4-211ENST00000590499 GRIA3P42263 894 aa10.76□□□□□ -0.69
SMAD4-211ENST00000590499 SKIV2L2P42285 1042 aaKnown RBP10.76□□□□□ -0.69
SMAD4-211ENST00000590499 CDKN2DP55273 166 aa10.76□□□□□ -0.69
SMAD4-211ENST00000590499 MC1RQ01726 317 aa10.76□□□□□ -0.69
SMAD4-211ENST00000590499 LY6DQ14210 128 aa10.76□□□□□ -0.69
SMAD4-211ENST00000590499 ARHGAP19Q14CB8 494 aa10.76□□□□□ -0.69
SMAD4-211ENST00000590499 ATP1A1-AS1Q5TC04 95 aa10.76□□□□□ -0.69
SMAD4-211ENST00000590499 LCN10Q6JVE6 187 aa10.76□□□□□ -0.69
SMAD4-211ENST00000590499 FAM199XQ6PEV8 388 aaPredicted RBP10.76□□□□□ -0.69
SMAD4-211ENST00000590499 FIGLAQ6QHK4 219 aa10.76□□□□□ -0.69
SMAD4-211ENST00000590499 KRTAP19-1Q8IUB9 90 aa10.76□□□□□ -0.69
SMAD4-211ENST00000590499 LRRC56Q8IYG6 542 aaPredicted RBP10.76□□□□□ -0.69
SMAD4-211ENST00000590499 OR2L3Q8NG85 312 aa10.76□□□□□ -0.69
SMAD4-211ENST00000590499 DLG3Q92796 817 aa10.76□□□□□ -0.69
SMAD4-211ENST00000590499 C16orf45Q96MC5 204 aaPredicted RBP10.76□□□□□ -0.69
SMAD4-211ENST00000590499 ZNF285Q96NJ3 590 aa10.76□□□□□ -0.69
SMAD4-211ENST00000590499 CATSPER2Q96P56 530 aa10.76□□□□□ -0.69
SMAD4-211ENST00000590499 MDFIQ99750 246 aa10.76□□□□□ -0.69
SMAD4-211ENST00000590499 MCMBPQ9BTE3 642 aa10.76□□□□□ -0.69
SMAD4-211ENST00000590499 GPR87Q9BY21 358 aa10.76□□□□□ -0.69
SMAD4-211ENST00000590499 CHST8Q9H2A9 424 aa10.76□□□□□ -0.69
SMAD4-211ENST00000590499 DPH5Q9H2P9 285 aa10.76□□□□□ -0.69
SMAD4-211ENST00000590499 TPSG1Q9NRR2 321 aa10.76□□□□□ -0.69
SMAD4-211ENST00000590499 EURLQ9NYK6 297 aa10.76□□□□□ -0.69
SMAD4-211ENST00000590499 TAS2R13Q9NYV9 303 aa10.76□□□□□ -0.69
SMAD4-211ENST00000590499 CDC23Q9UJX2 597 aa10.76□□□□□ -0.69
SMAD4-211ENST00000590499 KCND3Q9UK17 655 aa10.76□□□□□ -0.69
SMAD4-211ENST00000590499 CORO1CQ9ULV4 474 aaPredicted RBP10.76□□□□□ -0.69
SMAD4-211ENST00000590499 PLCL2Q9UPR0 1127 aa10.76□□□□□ -0.69
SMAD4-211ENST00000590499 PSAT1Q9Y617 370 aa10.76□□□□□ -0.69
SMAD4-211ENST00000590499 GCN1Q92616 2671 aaKnown RBP10.75□□□□□ -0.69
SMAD4-211ENST00000590499 TARM1B6A8C7 271 aa10.75□□□□□ -0.69
SMAD4-211ENST00000590499 EIF3HO15372 352 aaKnown RBP eCLIP10.75□□□□□ -0.69
SMAD4-211ENST00000590499 ZSCAN9O15535 394 aaPredicted RBP10.75□□□□□ -0.69
SMAD4-211ENST00000590499 ZNF749O43361 778 aa10.75□□□□□ -0.69
SMAD4-211ENST00000590499 NRP2O60462 931 aa10.75□□□□□ -0.69
SMAD4-211ENST00000590499 CTSVO60911 334 aa10.75□□□□□ -0.69
SMAD4-211ENST00000590499 CREG1O75629 220 aa10.75□□□□□ -0.69
SMAD4-211ENST00000590499 OR2B3O76000 313 aa10.75□□□□□ -0.69
SMAD4-211ENST00000590499 SLC16A8O95907 504 aa10.75□□□□□ -0.69
SMAD4-211ENST00000590499 PRKAR1AP10644 381 aa10.75□□□□□ -0.69
SMAD4-211ENST00000590499 FDXRP22570 491 aa10.75□□□□□ -0.69
SMAD4-211ENST00000590499 PTPN4P29074 926 aa10.75□□□□□ -0.69
SMAD4-211ENST00000590499 YBX1P67809 324 aaKnown RBP10.75□□□□□ -0.69
SMAD4-211ENST00000590499 MGAT5Q09328 741 aa10.75□□□□□ -0.69
SMAD4-211ENST00000590499 CALCOCO2Q13137 446 aa10.75□□□□□ -0.69
SMAD4-211ENST00000590499 SF1Q15637 639 aaKnown RBP10.75□□□□□ -0.69
SMAD4-211ENST00000590499 LRRC8EQ6NSJ5 796 aa10.75□□□□□ -0.69
SMAD4-211ENST00000590499 RHBDD2Q6NTF9 364 aa10.75□□□□□ -0.69
SMAD4-211ENST00000590499 UGT3A1Q6NUS8 523 aa10.75□□□□□ -0.69
SMAD4-211ENST00000590499 BORAQ6PGQ7 559 aa10.75□□□□□ -0.69
SMAD4-211ENST00000590499 PAQR3Q6TCH7 311 aa10.75□□□□□ -0.69
SMAD4-211ENST00000590499 FAM198BQ6UWH4 519 aa10.75□□□□□ -0.69
SMAD4-211ENST00000590499 ZDHHC24Q6UX98 284 aa10.75□□□□□ -0.69
SMAD4-211ENST00000590499 SYTL1Q8IYJ3 562 aa10.75□□□□□ -0.69
SMAD4-211ENST00000590499 ZBED8Q8IZ13 594 aa10.75□□□□□ -0.69
SMAD4-211ENST00000590499 ZNF843Q8N446 348 aa10.75□□□□□ -0.69
SMAD4-211ENST00000590499 RAB42Q8N4Z0 105 aa10.75□□□□□ -0.69
SMAD4-211ENST00000590499 ZNF480Q8WV37 535 aa10.75□□□□□ -0.69
SMAD4-211ENST00000590499 SMPDL3AQ92484 453 aa10.75□□□□□ -0.69
SMAD4-211ENST00000590499 MR1Q95460 341 aa10.75□□□□□ -0.69
SMAD4-211ENST00000590499 ZUFSPQ96AP4 578 aa10.75□□□□□ -0.69
SMAD4-211ENST00000590499 CLIP3Q96DZ5 547 aa10.75□□□□□ -0.69
SMAD4-211ENST00000590499 MED8Q96G25 268 aa10.75□□□□□ -0.69
SMAD4-211ENST00000590499 GBP5Q96PP8 586 aa10.75□□□□□ -0.69
SMAD4-211ENST00000590499 MIPEPQ99797 713 aa10.75□□□□□ -0.69
SMAD4-211ENST00000590499 SPRTNQ9H040 489 aaPredicted RBP10.75□□□□□ -0.69
SMAD4-211ENST00000590499 ACTL8Q9H568 366 aa10.75□□□□□ -0.69
SMAD4-211ENST00000590499 INTS7Q9NVH2 962 aaKnown RBP10.75□□□□□ -0.69
SMAD4-211ENST00000590499 TRMT6Q9UJA5 497 aaKnown RBP10.75□□□□□ -0.69
SMAD4-211ENST00000590499 AP1M2Q9Y6Q5 423 aa10.75□□□□□ -0.69
SMAD4-211ENST00000590499 IGKV1-8A0A0C4DH67 115 aa10.74□□□□□ -0.69
SMAD4-211ENST00000590499 OR2A25A4D2G3 310 aa10.74□□□□□ -0.69
SMAD4-211ENST00000590499 E7ENX8 843 aa10.74□□□□□ -0.69
SMAD4-211ENST00000590499 DYRK3O43781 588 aa10.74□□□□□ -0.69
SMAD4-211ENST00000590499 KATNA1O75449 491 aa10.74□□□□□ -0.69
SMAD4-211ENST00000590499 C1QAP02745 245 aa10.74□□□□□ -0.69
SMAD4-211ENST00000590499 KLK3P07288 261 aaPredicted RBP10.74□□□□□ -0.69
SMAD4-211ENST00000590499 HBQ1P09105 142 aa10.74□□□□□ -0.69
SMAD4-211ENST00000590499 RAB40ALP0C0E4 278 aa10.74□□□□□ -0.69
SMAD4-211ENST00000590499 FAM87AP0C7U9 286 aa10.74□□□□□ -0.69
SMAD4-211ENST00000590499 HSD17B2P37059 387 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms