RNA–Protein interactions for RNA: ENST00000589964.1

CROCCP3-203, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 3 BASIC

Gene CROCCP3, Length 255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-203ENST00000589964 H3BMM5 538 aa16.06■□□□□ 0.16
CROCCP3-203ENST00000589964 SEMA7AO75326 666 aa16.06■□□□□ 0.16
CROCCP3-203ENST00000589964 SYF2O95926 243 aaKnown RBP16.06■□□□□ 0.16
CROCCP3-203ENST00000589964 CELA2AP08217 269 aa16.06■□□□□ 0.16
CROCCP3-203ENST00000589964 PAMP19021 973 aa16.06■□□□□ 0.16
CROCCP3-203ENST00000589964 CCNFP41002 786 aa16.06■□□□□ 0.16
CROCCP3-203ENST00000589964 FNTAP49354 379 aa16.06■□□□□ 0.16
CROCCP3-203ENST00000589964 MYBPC3Q14896 1274 aa16.06■□□□□ 0.16
CROCCP3-203ENST00000589964 VWA2Q5GFL6 755 aa16.06■□□□□ 0.16
CROCCP3-203ENST00000589964 ZC3H12BQ5HYM0 836 aaKnown RBP16.06■□□□□ 0.16
CROCCP3-203ENST00000589964 VWA5B1Q5TIE3 1220 aa16.06■□□□□ 0.16
CROCCP3-203ENST00000589964 TTC23LQ6PF05 361 aa16.06■□□□□ 0.16
CROCCP3-203ENST00000589964 PRSS41Q7RTY9 318 aa16.06■□□□□ 0.16
CROCCP3-203ENST00000589964 KCNMB4Q86W47 210 aa16.06■□□□□ 0.16
CROCCP3-203ENST00000589964 PPIL6Q8IXY8 311 aa16.06■□□□□ 0.16
CROCCP3-203ENST00000589964 AMER3Q8N944 861 aa16.06■□□□□ 0.16
CROCCP3-203ENST00000589964 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.06■□□□□ 0.16
CROCCP3-203ENST00000589964 SMPDL3AQ92484 453 aa16.06■□□□□ 0.16
CROCCP3-203ENST00000589964 ZUFSPQ96AP4 578 aa16.06■□□□□ 0.16
CROCCP3-203ENST00000589964 FOPNLQ96NB1 174 aa16.06■□□□□ 0.16
CROCCP3-203ENST00000589964 INTS7Q9NVH2 962 aaKnown RBP16.06■□□□□ 0.16
CROCCP3-203ENST00000589964 CDC23Q9UJX2 597 aa16.06■□□□□ 0.16
CROCCP3-203ENST00000589964 ICE1Q9Y2F5 2266 aa16.06■□□□□ 0.16
CROCCP3-203ENST00000589964 GFYI3L273 518 aa16.05■□□□□ 0.16
CROCCP3-203ENST00000589964 SMAPO00193 183 aa16.05■□□□□ 0.16
CROCCP3-203ENST00000589964 DNALI1O14645 258 aaPredicted RBP16.05■□□□□ 0.16
CROCCP3-203ENST00000589964 FOXS1O43638 330 aa16.05■□□□□ 0.16
CROCCP3-203ENST00000589964 MMP11P24347 488 aa16.05■□□□□ 0.16
CROCCP3-203ENST00000589964 RPA3P35244 121 aaPredicted RBP16.05■□□□□ 0.16
CROCCP3-203ENST00000589964 SARNPP82979 210 aaKnown RBP16.05■□□□□ 0.16
CROCCP3-203ENST00000589964 KLC1Q07866 573 aa16.05■□□□□ 0.16
CROCCP3-203ENST00000589964 PTK6Q13882 451 aa16.05■□□□□ 0.16
CROCCP3-203ENST00000589964 HIF1AQ16665 826 aa16.05■□□□□ 0.16
CROCCP3-203ENST00000589964 PHKG1Q16816 387 aa16.05■□□□□ 0.16
CROCCP3-203ENST00000589964 ICE2Q659A1 982 aa16.05■□□□□ 0.16
CROCCP3-203ENST00000589964 KLHL7Q8IXQ5 586 aa16.05■□□□□ 0.16
CROCCP3-203ENST00000589964 PARP9Q8IXQ6 854 aa16.05■□□□□ 0.16
CROCCP3-203ENST00000589964 C2CD4AQ8NCU7 369 aaPredicted RBP16.05■□□□□ 0.16
CROCCP3-203ENST00000589964 EEF1AKMT1Q8WVE0 214 aa16.05■□□□□ 0.16
CROCCP3-203ENST00000589964 KCNJ9Q92806 393 aa16.05■□□□□ 0.16
CROCCP3-203ENST00000589964 CCDC138Q96M89 665 aa16.05■□□□□ 0.16
CROCCP3-203ENST00000589964 OR2A5Q96R48 311 aa16.05■□□□□ 0.16
CROCCP3-203ENST00000589964 ZFYVE21Q9BQ24 234 aa16.05■□□□□ 0.16
CROCCP3-203ENST00000589964 SLC26A1Q9H2B4 701 aa16.05■□□□□ 0.16
CROCCP3-203ENST00000589964 MRPS30Q9NP92 439 aaKnown RBP16.05■□□□□ 0.16
CROCCP3-203ENST00000589964 ASIC3Q9UHC3 531 aa16.05■□□□□ 0.16
CROCCP3-203ENST00000589964 PCYOX1Q9UHG3 505 aa16.05■□□□□ 0.16
CROCCP3-203ENST00000589964 SPTBN1Q01082 2364 aaKnown RBP16.05■□□□□ 0.16
CROCCP3-203ENST00000589964 CNTRLQ7Z7A1 2325 aa16.05■□□□□ 0.16
CROCCP3-203ENST00000589964 BLACEA4D250 179 aa16.04■□□□□ 0.16
CROCCP3-203ENST00000589964 OR2W5A6NFC9 320 aa16.04■□□□□ 0.16
CROCCP3-203ENST00000589964 TCP11X1B4DZS4 312 aa16.04■□□□□ 0.16
CROCCP3-203ENST00000589964 AGPSO00116 658 aa16.04■□□□□ 0.16
CROCCP3-203ENST00000589964 JRKO75564 520 aa16.04■□□□□ 0.16
CROCCP3-203ENST00000589964 PIAS1O75925 651 aa16.04■□□□□ 0.16
CROCCP3-203ENST00000589964 TSPAN12O95859 305 aa16.04■□□□□ 0.16
CROCCP3-203ENST00000589964 CATP04040 527 aaKnown RBP16.04■□□□□ 0.16
CROCCP3-203ENST00000589964 CMPK1P30085 196 aa16.04■□□□□ 0.16
CROCCP3-203ENST00000589964 SKIV2L2P42285 1042 aaKnown RBP16.04■□□□□ 0.16
CROCCP3-203ENST00000589964 ARSFP54793 590 aa16.04■□□□□ 0.16
CROCCP3-203ENST00000589964 RRADP55042 308 aa16.04■□□□□ 0.16
CROCCP3-203ENST00000589964 MAT1AQ00266 395 aaKnown RBP16.04■□□□□ 0.16
CROCCP3-203ENST00000589964 FASTKD3Q14CZ7 662 aaKnown RBP16.04■□□□□ 0.16
CROCCP3-203ENST00000589964 PPP1R7Q15435 360 aa16.04■□□□□ 0.16
CROCCP3-203ENST00000589964 BBS9Q3SYG4 887 aa16.04■□□□□ 0.16
CROCCP3-203ENST00000589964 CRB2Q5IJ48 1285 aa16.04■□□□□ 0.16
CROCCP3-203ENST00000589964 TCTE1Q5JU00 501 aa16.04■□□□□ 0.16
CROCCP3-203ENST00000589964 PAQR3Q6TCH7 311 aa16.04■□□□□ 0.16
CROCCP3-203ENST00000589964 VN1R4Q7Z5H5 301 aa16.04■□□□□ 0.16
CROCCP3-203ENST00000589964 CUZD1Q86UP6 607 aa16.04■□□□□ 0.16
CROCCP3-203ENST00000589964 CREG2Q8IUH2 290 aa16.04■□□□□ 0.16
CROCCP3-203ENST00000589964 CSNK1A1LQ8N752 337 aa16.04■□□□□ 0.16
CROCCP3-203ENST00000589964 TTC29Q8NA56 475 aaPredicted RBP16.04■□□□□ 0.16
CROCCP3-203ENST00000589964 OR11G2Q8NGC1 345 aa16.04■□□□□ 0.16
CROCCP3-203ENST00000589964 STT3BQ8TCJ2 826 aa16.04■□□□□ 0.16
CROCCP3-203ENST00000589964 PDE10AQ9Y233 779 aa16.04■□□□□ 0.16
CROCCP3-203ENST00000589964 PSAT1Q9Y617 370 aa16.04■□□□□ 0.16
CROCCP3-203ENST00000589964 A0A0A6YYC8 382 aaPredicted RBP16.03■□□□□ 0.16
CROCCP3-203ENST00000589964 CTAGE15A4D2H0 777 aa16.03■□□□□ 0.16
CROCCP3-203ENST00000589964 H7BY64 318 aa16.03■□□□□ 0.16
CROCCP3-203ENST00000589964 I3L1I5 382 aaPredicted RBP16.03■□□□□ 0.16
CROCCP3-203ENST00000589964 PEX12O00623 359 aa16.03■□□□□ 0.16
CROCCP3-203ENST00000589964 AHSGP02765 367 aa16.03■□□□□ 0.16
CROCCP3-203ENST00000589964 MPC1LP0DKB6 136 aa16.03■□□□□ 0.16
CROCCP3-203ENST00000589964 PGAM1P18669 254 aa16.03■□□□□ 0.16
CROCCP3-203ENST00000589964 PRDX1Q06830 199 aaKnown RBP16.03■□□□□ 0.16
CROCCP3-203ENST00000589964 FAAH2Q6GMR7 532 aa16.03■□□□□ 0.16
CROCCP3-203ENST00000589964 NEK10Q6ZWH5 1172 aa16.03■□□□□ 0.16
CROCCP3-203ENST00000589964 UBE2R2Q712K3 238 aaPredicted RBP16.03■□□□□ 0.16
CROCCP3-203ENST00000589964 CTAGE6Q86UF2 777 aa16.03■□□□□ 0.16
CROCCP3-203ENST00000589964 CISD2Q8N5K1 135 aaKnown RBP16.03■□□□□ 0.16
CROCCP3-203ENST00000589964 COL26A1Q96A83 441 aa16.03■□□□□ 0.16
CROCCP3-203ENST00000589964 SNRNP40Q96DI7 357 aaKnown RBP16.03■□□□□ 0.16
CROCCP3-203ENST00000589964 CFAP36Q96G28 342 aa16.03■□□□□ 0.16
CROCCP3-203ENST00000589964 PRAP1Q96NZ9 151 aa16.03■□□□□ 0.16
CROCCP3-203ENST00000589964 OLFM1Q99784 485 aa16.03■□□□□ 0.16
CROCCP3-203ENST00000589964 EBNA1BP2Q99848 306 aaKnown RBP16.03■□□□□ 0.16
CROCCP3-203ENST00000589964 C17orf62Q9BQA9 187 aa16.03■□□□□ 0.16
CROCCP3-203ENST00000589964 CRB3Q9BUF7 120 aa16.03■□□□□ 0.16
CROCCP3-203ENST00000589964 WDR54Q9H977 334 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms