RNA–Protein interactions for RNA: ENST00000589532.5

LSM7-205, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 539 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-205ENST00000589532 MRNIPQ6NTE8 343 aa22.73■■□□□ 1.23
LSM7-205ENST00000589532 CENPUQ71F23 418 aa22.73■■□□□ 1.23
LSM7-205ENST00000589532 OTOAQ7RTW8 1153 aa22.73■■□□□ 1.23
LSM7-205ENST00000589532 SDCCAG8Q86SQ7 713 aaPredicted RBP22.73■■□□□ 1.23
LSM7-205ENST00000589532 ZUFSPQ96AP4 578 aa22.73■■□□□ 1.23
LSM7-205ENST00000589532 ZNF669Q96BR6 464 aaPredicted RBP22.73■■□□□ 1.23
LSM7-205ENST00000589532 SIGLEC10Q96LC7 697 aa22.73■■□□□ 1.23
LSM7-205ENST00000589532 SELENOSQ9BQE4 189 aa22.73■■□□□ 1.23
LSM7-205ENST00000589532 ATP13A2Q9NQ11 1180 aa22.73■■□□□ 1.23
LSM7-205ENST00000589532 SPATA7Q9P0W8 599 aa22.73■■□□□ 1.23
LSM7-205ENST00000589532 NTNG1Q9Y2I2 539 aa22.73■■□□□ 1.23
LSM7-205ENST00000589532 CSAG2Q9Y5P2 127 aa22.73■■□□□ 1.23
LSM7-205ENST00000589532 MYO9AB2RTY4 2548 aa22.72■■□□□ 1.23
LSM7-205ENST00000589532 KPNA5O15131 536 aa22.72■■□□□ 1.23
LSM7-205ENST00000589532 KLHL41O60662 606 aa22.72■■□□□ 1.23
LSM7-205ENST00000589532 NIPSNAP2O75323 286 aa22.72■■□□□ 1.23
LSM7-205ENST00000589532 ALOX12BO75342 701 aa22.72■■□□□ 1.23
LSM7-205ENST00000589532 MATN4O95460 622 aa22.72■■□□□ 1.23
LSM7-205ENST00000589532 CBX6O95503 412 aa22.72■■□□□ 1.23
LSM7-205ENST00000589532 CCNFP41002 786 aa22.72■■□□□ 1.23
LSM7-205ENST00000589532 ADARP55265 1226 aaKnown RBP22.72■■□□□ 1.23
LSM7-205ENST00000589532 MRPS25P82663 173 aaKnown RBP22.72■■□□□ 1.23
LSM7-205ENST00000589532 DHX9Q08211 1270 aaKnown RBP22.72■■□□□ 1.23
LSM7-205ENST00000589532 ANKRD20A4Q4UJ75 823 aa22.72■■□□□ 1.23
LSM7-205ENST00000589532 EEF1AKMT2Q5JPI9 291 aaKnown RBP22.72■■□□□ 1.23
LSM7-205ENST00000589532 CNSTQ6PJW8 725 aa22.72■■□□□ 1.23
LSM7-205ENST00000589532 KIRREL2Q6UWL6 708 aa22.72■■□□□ 1.23
LSM7-205ENST00000589532 IGFL2Q6UWQ7 119 aa22.72■■□□□ 1.23
LSM7-205ENST00000589532 CUZD1Q86UP6 607 aa22.72■■□□□ 1.23
LSM7-205ENST00000589532 LMNTD2Q8IXW0 634 aa22.72■■□□□ 1.23
LSM7-205ENST00000589532 EBNA1BP2Q99848 306 aaKnown RBP22.72■■□□□ 1.23
LSM7-205ENST00000589532 LRRC1Q9BTT6 524 aa22.72■■□□□ 1.23
LSM7-205ENST00000589532 FAM129AQ9BZQ8 928 aa22.72■■□□□ 1.23
LSM7-205ENST00000589532 OR2A25A4D2G3 310 aa22.71■■□□□ 1.23
LSM7-205ENST00000589532 NDUFS3O75489 264 aa22.71■■□□□ 1.23
LSM7-205ENST00000589532 VAPBO95292 243 aa22.71■■□□□ 1.23
LSM7-205ENST00000589532 YBX1P67809 324 aaKnown RBP22.71■■□□□ 1.23
LSM7-205ENST00000589532 THOC5Q13769 683 aaKnown RBP22.71■■□□□ 1.23
LSM7-205ENST00000589532 NR6A1Q15406 480 aa22.71■■□□□ 1.23
LSM7-205ENST00000589532 RNF187Q5TA31 235 aaPredicted RBP22.71■■□□□ 1.23
LSM7-205ENST00000589532 PRAMEF13Q5VWM6 474 aa22.71■■□□□ 1.23
LSM7-205ENST00000589532 CES3Q6UWW8 571 aa22.71■■□□□ 1.23
LSM7-205ENST00000589532 CEP128Q6ZU80 1094 aa22.71■■□□□ 1.23
LSM7-205ENST00000589532 TTC29Q8NA56 475 aaPredicted RBP22.71■■□□□ 1.23
LSM7-205ENST00000589532 CALML6Q8TD86 181 aa22.71■■□□□ 1.23
LSM7-205ENST00000589532 TM9SF4Q92544 642 aa22.71■■□□□ 1.23
LSM7-205ENST00000589532 MIPEPQ99797 713 aa22.71■■□□□ 1.23
LSM7-205ENST00000589532 MESP1Q9BRJ9 268 aa22.71■■□□□ 1.23
LSM7-205ENST00000589532 SYNPO2LQ9H987 977 aa22.71■■□□□ 1.23
LSM7-205ENST00000589532 FAM114A2Q9NRY5 505 aa22.71■■□□□ 1.23
LSM7-205ENST00000589532 NXT1Q9UKK6 140 aaKnown RBP22.71■■□□□ 1.23
LSM7-205ENST00000589532 VPS9D1Q9Y2B5 631 aa22.71■■□□□ 1.23
LSM7-205ENST00000589532 LRBAP50851 2863 aa22.71■■□□□ 1.23
LSM7-205ENST00000589532 WIPF3A6NGB9 483 aa22.7■■□□□ 1.22
LSM7-205ENST00000589532 EIF3HO15372 352 aaKnown RBP eCLIP22.7■■□□□ 1.22
LSM7-205ENST00000589532 SRPX2O60687 465 aaPredicted RBP22.7■■□□□ 1.22
LSM7-205ENST00000589532 PIM1P11309 404 aaPredicted RBP22.7■■□□□ 1.22
LSM7-205ENST00000589532 OR1D4P47884 311 aa22.7■■□□□ 1.22
LSM7-205ENST00000589532 FASTKQ14296 549 aaKnown RBP22.7■■□□□ 1.22
LSM7-205ENST00000589532 SPANXN3Q5MJ09 141 aa22.7■■□□□ 1.22
LSM7-205ENST00000589532 TTC23LQ6PF05 361 aa22.7■■□□□ 1.22
LSM7-205ENST00000589532 CISD2Q8N5K1 135 aaKnown RBP22.7■■□□□ 1.22
LSM7-205ENST00000589532 METTL27Q8N6F8 245 aaPredicted RBP22.7■■□□□ 1.22
LSM7-205ENST00000589532 SERBP1Q8NC51 408 aaKnown RBP eCLIP22.7■■□□□ 1.22
LSM7-205ENST00000589532 C10orf90Q96M02 699 aa22.7■■□□□ 1.22
LSM7-205ENST00000589532 TCF12Q99081 682 aa22.7■■□□□ 1.22
LSM7-205ENST00000589532 PHACTR1Q9C0D0 580 aa22.7■■□□□ 1.22
LSM7-205ENST00000589532 SOX17Q9H6I2 414 aaPredicted RBP22.7■■□□□ 1.22
LSM7-205ENST00000589532 ERRFI1Q9UJM3 462 aaPredicted RBP22.7■■□□□ 1.22
LSM7-205ENST00000589532 CNTRLQ7Z7A1 2325 aa22.69■■□□□ 1.22
LSM7-205ENST00000589532 GOLGA8KD6RF30 607 aa22.69■■□□□ 1.22
LSM7-205ENST00000589532 GOLGA8TH3BQL2 631 aa22.69■■□□□ 1.22
LSM7-205ENST00000589532 DEKP35659 375 aaKnown RBP22.69■■□□□ 1.22
LSM7-205ENST00000589532 VSX2P58304 361 aaPredicted RBP22.69■■□□□ 1.22
LSM7-205ENST00000589532 LONRF1Q17RB8 773 aa22.69■■□□□ 1.22
LSM7-205ENST00000589532 WASHC2DQ5SRD0 308 aa22.69■■□□□ 1.22
LSM7-205ENST00000589532 SHISA6Q6ZSJ9 500 aa22.69■■□□□ 1.22
LSM7-205ENST00000589532 OR11G2Q8NGC1 345 aa22.69■■□□□ 1.22
LSM7-205ENST00000589532 GSDMBQ8TAX9 411 aa22.69■■□□□ 1.22
LSM7-205ENST00000589532 PPP4R1Q8TF05 950 aa22.69■■□□□ 1.22
LSM7-205ENST00000589532 WDR77Q9BQA1 342 aaPredicted RBP22.69■■□□□ 1.22
LSM7-205ENST00000589532 ILKAPQ9H0C8 392 aaPredicted RBP22.69■■□□□ 1.22
LSM7-205ENST00000589532 IL1RAPL1Q9NZN1 696 aa22.69■■□□□ 1.22
LSM7-205ENST00000589532 GALPQ9UBC7 116 aa22.69■■□□□ 1.22
LSM7-205ENST00000589532 FAM169AQ9Y6X4 670 aa22.69■■□□□ 1.22
LSM7-205ENST00000589532 IGLV3-12A0A075B6K2 115 aa22.68■■□□□ 1.22
LSM7-205ENST00000589532 LOC105369274A0A096LPK9 316 aa22.68■■□□□ 1.22
LSM7-205ENST00000589532 LOC102723532A0A0G2JNH3 316 aa22.68■■□□□ 1.22
LSM7-205ENST00000589532 ARHGEF33A8MVX0 844 aa22.68■■□□□ 1.22
LSM7-205ENST00000589532 MYO1CO00159 1063 aa22.68■■□□□ 1.22
LSM7-205ENST00000589532 DDAH2O95865 285 aa22.68■■□□□ 1.22
LSM7-205ENST00000589532 LDLRP01130 860 aa22.68■■□□□ 1.22
LSM7-205ENST00000589532 ESR1P03372 595 aa22.68■■□□□ 1.22
LSM7-205ENST00000589532 OGNP20774 298 aaKnown RBP22.68■■□□□ 1.22
LSM7-205ENST00000589532 ITGA3P26006 1051 aa22.68■■□□□ 1.22
LSM7-205ENST00000589532 PLTPP55058 493 aa22.68■■□□□ 1.22
LSM7-205ENST00000589532 SLC7A5Q01650 507 aa22.68■■□□□ 1.22
LSM7-205ENST00000589532 GUCY2DQ02846 1103 aa22.68■■□□□ 1.22
LSM7-205ENST00000589532 Q0VFX4 171 aa22.68■■□□□ 1.22
LSM7-205ENST00000589532 PDIA2Q13087 525 aaKnown RBP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms