RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 ERFP50548 548 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 NEK2P51955 445 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 TBPL1P62380 186 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 GRSF1Q12849 480 aaKnown RBP eCLIP10.05□□□□□ -0.8
VPS25-203ENST00000589520 HTR4Q13639 388 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 PTGR1Q14914 329 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 CYP2A13Q16696 494 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 FBXO43Q4G163 708 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 SPANXN4Q5MJ08 99 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 PRAMEF9Q5VWM5 478 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 GLYATQ6IB77 296 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 GALNT18Q6P9A2 607 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 NXPE4Q6UWF7 544 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 CAMKMTQ7Z624 323 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 HORMAD1Q86X24 394 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 SYT12Q8IV01 421 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 SFTPA1Q8IWL2 248 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 RIMKLAQ8IXN7 391 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 LRRC56Q8IYG6 542 aaPredicted RBP10.05□□□□□ -0.8
VPS25-203ENST00000589520 TDHQ8IZJ6 230 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 NATD1Q8N6N6 113 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 OR7G3Q8NG95 312 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 CHTF18Q8WVB6 975 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 CANT1Q8WVQ1 401 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 TFGQ92734 400 aaPredicted RBP10.05□□□□□ -0.8
VPS25-203ENST00000589520 N4BP2L2Q92802 583 aaPredicted RBP10.05□□□□□ -0.8
VPS25-203ENST00000589520 DNASE1L2Q92874 299 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 GATA6Q92908 595 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 EME1Q96AY2 570 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 APIPQ96GX9 242 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 MSLNLQ96KJ4 702 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 APOLD1Q96LR9 279 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 TMEM74Q96NL1 305 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 OR4K3Q96R72 315 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 RAB11FIP5Q9BXF6 653 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 UGT2B28Q9BY64 529 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 SLC17A9Q9BYT1 436 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 TRIT1Q9H3H1 467 aaKnown RBP10.05□□□□□ -0.8
VPS25-203ENST00000589520 PELI2Q9HAT8 420 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 FBXL12Q9NXK8 326 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 PDP2Q9P2J9 529 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 FAM8A1Q9UBU6 413 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 ANAPC2Q9UJX6 822 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 GMEB1Q9Y692 573 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 AP1M2Q9Y6Q5 423 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 KIAA1549LQ6ZVL6 1849 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 A0A1W2PP55 124 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 EVPLLA8MZ36 301 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 FAM220BPB1ANY3 271 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 E7EQ34 232 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 CACNB4O00305 520 aaPredicted RBP10.04□□□□□ -0.8
VPS25-203ENST00000589520 TOR1BO14657 336 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 GSTA4O15217 222 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 ANXA6P08133 673 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 ERGP11308 486 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 PIM1P11309 404 aaPredicted RBP10.04□□□□□ -0.8
VPS25-203ENST00000589520 IL1RNP18510 177 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 GGT1P19440 569 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 PPIBP23284 216 aaKnown RBP10.04□□□□□ -0.8
VPS25-203ENST00000589520 PTX3P26022 381 aaPredicted RBP10.04□□□□□ -0.8
VPS25-203ENST00000589520 CTHP32929 405 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 GSTM5P46439 218 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 DGKQP52824 942 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 FOLH1Q04609 750 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 CYP4F3Q08477 520 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 ABHD18Q0P651 414 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 NFE2L1Q14494 772 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 COL19A1Q14993 1142 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 CYP51A1Q16850 503 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 TMEM259Q4ZIN3 620 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 SFT2D3Q587I9 215 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 RABL3Q5HYI8 236 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 EOGTQ5NDL2 527 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 TBCELQ5QJ74 424 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 PRAMEF14Q5SWL7 426 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 INTS11Q5TA45 600 aaKnown RBP10.04□□□□□ -0.8
VPS25-203ENST00000589520 PRAMEF13Q5VWM6 474 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 CAPRIN2Q6IMN6 1127 aaKnown RBP10.04□□□□□ -0.8
VPS25-203ENST00000589520 CRTC3Q6UUV7 619 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 CYP2R1Q6VVX0 501 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 R3HCC1LQ7Z5L2 792 aaKnown RBP10.04□□□□□ -0.8
VPS25-203ENST00000589520 TRIM74Q86UV6 250 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 SPPL2CQ8IUH8 684 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 KBTBD2Q8IY47 623 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 LILRA2Q8N149 483 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 MARVELD2Q8N4S9 558 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 LILRA3Q8N6C8 439 aaPredicted RBP10.04□□□□□ -0.8
VPS25-203ENST00000589520 TP53I13Q8NBR0 393 aaPredicted RBP10.04□□□□□ -0.8
VPS25-203ENST00000589520 PLA2G15Q8NCC3 412 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 DENND6BQ8NEG7 585 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 OR2T12Q8NG77 320 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 OR5K2Q8NHB8 316 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 MAFAQ8NHW3 353 aaPredicted RBP10.04□□□□□ -0.8
VPS25-203ENST00000589520 GANCQ8TET4 914 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 SMPDL3AQ92484 453 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 NELL1Q92832 810 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 SLCO4A1Q96BD0 722 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 PPWD1Q96BP3 646 aaKnown RBP10.04□□□□□ -0.8
VPS25-203ENST00000589520 C11orf24Q96F05 449 aaPredicted RBP10.04□□□□□ -0.8
VPS25-203ENST00000589520 CENPNQ96H22 339 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms