RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 SLC22A17Q8WUG5 538 aa7.19□□□□□ -1.26
ZNF540-206ENST00000589117 AUTS2Q8WXX7 1259 aa7.19□□□□□ -1.26
ZNF540-206ENST00000589117 MTFMTQ96DP5 389 aaKnown RBP7.19□□□□□ -1.26
ZNF540-206ENST00000589117 FOPNLQ96NB1 174 aa7.19□□□□□ -1.26
ZNF540-206ENST00000589117 FRG2BQ96QU4 278 aa7.19□□□□□ -1.26
ZNF540-206ENST00000589117 BHLHE41Q9C0J9 482 aaPredicted RBP7.19□□□□□ -1.26
ZNF540-206ENST00000589117 FAM83DQ9H4H8 585 aa7.19□□□□□ -1.26
ZNF540-206ENST00000589117 KAT8Q9H7Z6 458 aaKnown RBP7.19□□□□□ -1.26
ZNF540-206ENST00000589117 FARSBQ9NSD9 589 aaKnown RBP7.19□□□□□ -1.26
ZNF540-206ENST00000589117 DCAF13Q9NV06 445 aaKnown RBP7.19□□□□□ -1.26
ZNF540-206ENST00000589117 TMEM9Q9P0T7 183 aa7.19□□□□□ -1.26
ZNF540-206ENST00000589117 IFT80Q9P2H3 777 aaPredicted RBP7.19□□□□□ -1.26
ZNF540-206ENST00000589117 TBC1D14Q9P2M4 693 aa7.19□□□□□ -1.26
ZNF540-206ENST00000589117 SAMD4AQ9UPU9 718 aaKnown RBP7.19□□□□□ -1.26
ZNF540-206ENST00000589117 UPK3BL1B0FP48 263 aa7.19□□□□□ -1.26
ZNF540-206ENST00000589117 FAM220BPB1ANY3 271 aa7.19□□□□□ -1.26
ZNF540-206ENST00000589117 UPK3BL2E5RIL1 263 aa7.19□□□□□ -1.26
ZNF540-206ENST00000589117 NPIPB8E9PQR5 432 aa7.19□□□□□ -1.26
ZNF540-206ENST00000589117 GFYI3L273 518 aa7.19□□□□□ -1.26
ZNF540-206ENST00000589117 WNT9AO14904 365 aa7.19□□□□□ -1.26
ZNF540-206ENST00000589117 CREG1O75629 220 aa7.19□□□□□ -1.26
ZNF540-206ENST00000589117 CCNDBP1O95273 360 aa7.19□□□□□ -1.26
ZNF540-206ENST00000589117 UGT2B4P06133 528 aa7.19□□□□□ -1.26
ZNF540-206ENST00000589117 C8AP07357 584 aa7.19□□□□□ -1.26
ZNF540-206ENST00000589117 CTSAP10619 480 aa7.19□□□□□ -1.26
ZNF540-206ENST00000589117 PCNAP12004 261 aa7.19□□□□□ -1.26
ZNF540-206ENST00000589117 HALP42357 657 aa7.19□□□□□ -1.26
ZNF540-206ENST00000589117 KIR3DL1P43629 444 aa7.19□□□□□ -1.26
ZNF540-206ENST00000589117 CDH15P55291 814 aa7.19□□□□□ -1.26
ZNF540-206ENST00000589117 TUBA3CQ13748 450 aa7.19□□□□□ -1.26
ZNF540-206ENST00000589117 PGS1Q32NB8 556 aa7.19□□□□□ -1.26
ZNF540-206ENST00000589117 PTCHD3Q3KNS1 767 aa7.19□□□□□ -1.26
ZNF540-206ENST00000589117 LRIF1Q5T3J3 769 aa7.19□□□□□ -1.26
ZNF540-206ENST00000589117 SAMD5Q5TGI4 173 aa7.19□□□□□ -1.26
ZNF540-206ENST00000589117 BROXQ5VW32 411 aa7.19□□□□□ -1.26
ZNF540-206ENST00000589117 ELMSAN1Q6PJG2 1045 aa7.19□□□□□ -1.26
ZNF540-206ENST00000589117 USP51Q70EK9 711 aa7.19□□□□□ -1.26
ZNF540-206ENST00000589117 RTL10Q7L3V2 364 aa7.19□□□□□ -1.26
ZNF540-206ENST00000589117 GPR149Q86SP6 731 aa7.19□□□□□ -1.26
ZNF540-206ENST00000589117 FBXO30Q8TB52 745 aa7.19□□□□□ -1.26
ZNF540-206ENST00000589117 FAM110BQ8TC76 370 aa7.19□□□□□ -1.26
ZNF540-206ENST00000589117 ISOC1Q96CN7 298 aa7.19□□□□□ -1.26
ZNF540-206ENST00000589117 REXO5Q96IC2 774 aaKnown RBP7.19□□□□□ -1.26
ZNF540-206ENST00000589117 FBXL20Q96IG2 436 aa7.19□□□□□ -1.26
ZNF540-206ENST00000589117 CORO1BQ9BR76 489 aa7.19□□□□□ -1.26
ZNF540-206ENST00000589117 ZSCAN5AQ9BUG6 496 aa7.19□□□□□ -1.26
ZNF540-206ENST00000589117 ACPTQ9BZG2 426 aa7.19□□□□□ -1.26
ZNF540-206ENST00000589117 POLR1BQ9H9Y6 1135 aa7.19□□□□□ -1.26
ZNF540-206ENST00000589117 ETAA1Q9NY74 926 aa7.19□□□□□ -1.26
ZNF540-206ENST00000589117 CIDEBQ9UHD4 219 aa7.19□□□□□ -1.26
ZNF540-206ENST00000589117 RPS6KA6Q9UK32 745 aa7.19□□□□□ -1.26
ZNF540-206ENST00000589117 INTS6Q9UL03 887 aaKnown RBP7.19□□□□□ -1.26
ZNF540-206ENST00000589117 MAN2B2Q9Y2E5 1009 aa7.19□□□□□ -1.26
ZNF540-206ENST00000589117 PCDHB14Q9Y5E9 798 aa7.19□□□□□ -1.26
ZNF540-206ENST00000589117 SOBPA7XYQ1 873 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 ZNF197O14709 1029 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 DNAJB5O75953 348 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 CXCL14O95715 111 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 MT-ND1P03886 318 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 PABPC1P11940 636 aaKnown RBP7.18□□□□□ -1.26
ZNF540-206ENST00000589117 POLR2EP19388 210 aaKnown RBP7.18□□□□□ -1.26
ZNF540-206ENST00000589117 HLA-FP30511 346 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 STK19P49842 368 aaPredicted RBP7.18□□□□□ -1.26
ZNF540-206ENST00000589117 DCDC1P59894 354 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 RPS26P62854 115 aaKnown RBP7.18□□□□□ -1.26
ZNF540-206ENST00000589117 IRF8Q02556 426 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 LRRC74AQ0VAA2 488 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 CSTF3Q12996 717 aaKnown RBP7.18□□□□□ -1.26
ZNF540-206ENST00000589117 PLCL1Q15111 1095 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 ZNF284Q2VY69 593 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 TRIM60Q495X7 471 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 SYTL3Q4VX76 610 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 ERICH5Q6P6B1 374 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 ZNF773Q6PK81 442 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 DPY19L3Q6ZPD9 716 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 KCTD8Q6ZWB6 473 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 OFCC1Q8IZS5 231 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 ZCCHC7Q8N3Z6 543 aaKnown RBP7.18□□□□□ -1.26
ZNF540-206ENST00000589117 KREMEN2Q8NCW0 462 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 OR5K1Q8NHB7 308 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 ELMO1Q92556 727 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 HDAC2Q92769 488 aaKnown RBP7.18□□□□□ -1.26
ZNF540-206ENST00000589117 TMEM159Q96B96 161 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 PYURFQ96I23 114 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 LRIG1Q96JA1 1093 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 CCDC138Q96M89 665 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 MUS81Q96NY9 551 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 HEPHQ9BQS7 1158 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 TBCDQ9BTW9 1192 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 BBS2Q9BXC9 721 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 NPLQ9BXD5 320 aaPredicted RBP7.18□□□□□ -1.26
ZNF540-206ENST00000589117 ASPSCR1Q9BZE9 553 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 ADNPQ9H2P0 1102 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 USE1Q9NZ43 259 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 FAF1Q9UNN5 650 aaPredicted RBP7.18□□□□□ -1.26
ZNF540-206ENST00000589117 CORO2BQ9UQ03 480 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 TET1Q8NFU7 2136 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 WASH3PC4AMC7 463 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 NEDD8-MDP1E9PL57 170 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 FGF18O76093 207 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms