RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 TC2NQ8N9U0 490 aa7.6□□□□□ -1.19
ATG4D-210ENST00000588972 HJURPQ8NCD3 748 aaPredicted RBP7.6□□□□□ -1.19
ATG4D-210ENST00000588972 SLC25A43Q8WUT9 341 aaPredicted RBP7.6□□□□□ -1.19
ATG4D-210ENST00000588972 DNASE2BQ8WZ79 361 aa7.6□□□□□ -1.19
ATG4D-210ENST00000588972 NCSTNQ92542 709 aa7.6□□□□□ -1.19
ATG4D-210ENST00000588972 CNOT9Q92600 299 aaKnown RBP7.6□□□□□ -1.19
ATG4D-210ENST00000588972 IGSF8Q969P0 613 aa7.6□□□□□ -1.19
ATG4D-210ENST00000588972 AZIN2Q96A70 460 aa7.6□□□□□ -1.19
ATG4D-210ENST00000588972 TMA16Q96EY4 203 aaKnown RBP7.6□□□□□ -1.19
ATG4D-210ENST00000588972 PGAP3Q96FM1 320 aaPredicted RBP7.6□□□□□ -1.19
ATG4D-210ENST00000588972 VCPIP1Q96JH7 1222 aa7.6□□□□□ -1.19
ATG4D-210ENST00000588972 NPLQ9BXD5 320 aaPredicted RBP7.6□□□□□ -1.19
ATG4D-210ENST00000588972 THAP2Q9H0W7 228 aa7.6□□□□□ -1.19
ATG4D-210ENST00000588972 ISCUQ9H1K1 167 aa7.6□□□□□ -1.19
ATG4D-210ENST00000588972 DEF6Q9H4E7 631 aa7.6□□□□□ -1.19
ATG4D-210ENST00000588972 GAREM1Q9H706 876 aa7.6□□□□□ -1.19
ATG4D-210ENST00000588972 CD93Q9NPY3 652 aa7.6□□□□□ -1.19
ATG4D-210ENST00000588972 DUSP22Q9NRW4 184 aa7.6□□□□□ -1.19
ATG4D-210ENST00000588972 ARHGEF38Q9NXL2 777 aa7.6□□□□□ -1.19
ATG4D-210ENST00000588972 MPP6Q9NZW5 540 aa7.6□□□□□ -1.19
ATG4D-210ENST00000588972 VANGL2Q9ULK5 521 aa7.6□□□□□ -1.19
ATG4D-210ENST00000588972 CORO1CQ9ULV4 474 aaPredicted RBP7.6□□□□□ -1.19
ATG4D-210ENST00000588972 DOCK4Q8N1I0 1966 aa7.6□□□□□ -1.19
ATG4D-210ENST00000588972 MGAQ8IWI9 3026 aa7.6□□□□□ -1.19
ATG4D-210ENST00000588972 TEX13CA0A0J9YWL9 993 aa7.59□□□□□ -1.19
ATG4D-210ENST00000588972 CENPVL1A0A0U1RR11 272 aa7.59□□□□□ -1.19
ATG4D-210ENST00000588972 C17orf100A8MU93 164 aa7.59□□□□□ -1.19
ATG4D-210ENST00000588972 E9PAM4 449 aa7.59□□□□□ -1.19
ATG4D-210ENST00000588972 LDLRAD4O15165 306 aa7.59□□□□□ -1.19
ATG4D-210ENST00000588972 MPPED1O15442 326 aa7.59□□□□□ -1.19
ATG4D-210ENST00000588972 TSPAN9O75954 239 aa7.59□□□□□ -1.19
ATG4D-210ENST00000588972 C1QL1O75973 258 aa7.59□□□□□ -1.19
ATG4D-210ENST00000588972 CNTN5O94779 1100 aa7.59□□□□□ -1.19
ATG4D-210ENST00000588972 SLC2A3P11169 496 aa7.59□□□□□ -1.19
ATG4D-210ENST00000588972 FPR3P25089 353 aa7.59□□□□□ -1.19
ATG4D-210ENST00000588972 PSMA2P25787 234 aa7.59□□□□□ -1.19
ATG4D-210ENST00000588972 CD70P32970 193 aa7.59□□□□□ -1.19
ATG4D-210ENST00000588972 SLC18A3Q16572 532 aa7.59□□□□□ -1.19
ATG4D-210ENST00000588972 ASTE1Q2TB18 679 aaPredicted RBP7.59□□□□□ -1.19
ATG4D-210ENST00000588972 AP5B1Q2VPB7 878 aa7.59□□□□□ -1.19
ATG4D-210ENST00000588972 FSCBQ5H9T9 825 aa7.59□□□□□ -1.19
ATG4D-210ENST00000588972 BRMS1LQ5PSV4 323 aa7.59□□□□□ -1.19
ATG4D-210ENST00000588972 KIAA0895LQ68EN5 471 aa7.59□□□□□ -1.19
ATG4D-210ENST00000588972 PPP1R2P3Q6NXS1 205 aa7.59□□□□□ -1.19
ATG4D-210ENST00000588972 FBXL22Q6P050 247 aa7.59□□□□□ -1.19
ATG4D-210ENST00000588972 SCYL2Q6P3W7 929 aa7.59□□□□□ -1.19
ATG4D-210ENST00000588972 ALKBH5Q6P6C2 394 aaKnown RBP7.59□□□□□ -1.19
ATG4D-210ENST00000588972 ARCQ7LC44 396 aa7.59□□□□□ -1.19
ATG4D-210ENST00000588972 ZNF551Q7Z340 670 aaPredicted RBP7.59□□□□□ -1.19
ATG4D-210ENST00000588972 MFN1Q8IWA4 741 aa7.59□□□□□ -1.19
ATG4D-210ENST00000588972 SPC24Q8NBT2 197 aa7.59□□□□□ -1.19
ATG4D-210ENST00000588972 ABHD11Q8NFV4 315 aa7.59□□□□□ -1.19
ATG4D-210ENST00000588972 CADM4Q8NFZ8 388 aa7.59□□□□□ -1.19
ATG4D-210ENST00000588972 C2CD4CQ8TF44 421 aa7.59□□□□□ -1.19
ATG4D-210ENST00000588972 SORCS1Q8WY21 1168 aa7.59□□□□□ -1.19
ATG4D-210ENST00000588972 RPRD1AQ96P16 312 aaPredicted RBP7.59□□□□□ -1.19
ATG4D-210ENST00000588972 ACOX2Q99424 681 aa7.59□□□□□ -1.19
ATG4D-210ENST00000588972 DDX50Q9BQ39 737 aaKnown RBP7.59□□□□□ -1.19
ATG4D-210ENST00000588972 AIFM2Q9BRQ8 373 aa7.59□□□□□ -1.19
ATG4D-210ENST00000588972 THAP7Q9BT49 309 aaPredicted RBP7.59□□□□□ -1.19
ATG4D-210ENST00000588972 NHEJ1Q9H9Q4 299 aaPredicted RBP7.59□□□□□ -1.19
ATG4D-210ENST00000588972 ABCB8Q9NUT2 735 aa7.59□□□□□ -1.19
ATG4D-210ENST00000588972 PARVAQ9NVD7 372 aa7.59□□□□□ -1.19
ATG4D-210ENST00000588972 ZNHIT6Q9NWK9 470 aaKnown RBP7.59□□□□□ -1.19
ATG4D-210ENST00000588972 GPATCH2LQ9NWQ4 482 aa7.59□□□□□ -1.19
ATG4D-210ENST00000588972 SLC12A6Q9UHW9 1150 aa7.59□□□□□ -1.19
ATG4D-210ENST00000588972 RPS6KA6Q9UK32 745 aa7.59□□□□□ -1.19
ATG4D-210ENST00000588972 TMEM5Q9Y2B1 443 aa7.59□□□□□ -1.19
ATG4D-210ENST00000588972 KCNE2Q9Y6J6 123 aa7.59□□□□□ -1.19
ATG4D-210ENST00000588972 KNTC1P50748 2209 aa7.59□□□□□ -1.19
ATG4D-210ENST00000588972 TYW5A2RUC4 315 aaKnown RBP7.58□□□□□ -1.2
ATG4D-210ENST00000588972 TRABD2BA6NFA1 517 aa7.58□□□□□ -1.2
ATG4D-210ENST00000588972 TMEM191CA6NGB0 347 aa7.58□□□□□ -1.2
ATG4D-210ENST00000588972 FAM72CH0Y354 149 aa7.58□□□□□ -1.2
ATG4D-210ENST00000588972 BCAT2O15382 392 aaPredicted RBP7.58□□□□□ -1.2
ATG4D-210ENST00000588972 PEX1O43933 1283 aa7.58□□□□□ -1.2
ATG4D-210ENST00000588972 SEC14L2O76054 403 aa7.58□□□□□ -1.2
ATG4D-210ENST00000588972 LUC7L3O95232 432 aaKnown RBP7.58□□□□□ -1.2
ATG4D-210ENST00000588972 PGM3O95394 542 aa7.58□□□□□ -1.2
ATG4D-210ENST00000588972 PRB1P04280 392 aa7.58□□□□□ -1.2
ATG4D-210ENST00000588972 CYP1A2P05177 515 aa7.58□□□□□ -1.2
ATG4D-210ENST00000588972 ALDOCP09972 364 aaKnown RBP7.58□□□□□ -1.2
ATG4D-210ENST00000588972 MYBL1P10243 752 aa7.58□□□□□ -1.2
ATG4D-210ENST00000588972 EGR2P11161 476 aaPredicted RBP7.58□□□□□ -1.2
ATG4D-210ENST00000588972 PKMP14618 531 aaKnown RBP7.58□□□□□ -1.2
ATG4D-210ENST00000588972 TCF4P15884 667 aa7.58□□□□□ -1.2
ATG4D-210ENST00000588972 NDUFS1P28331 727 aa7.58□□□□□ -1.2
ATG4D-210ENST00000588972 FOLR3P41439 243 aa7.58□□□□□ -1.2
ATG4D-210ENST00000588972 GALCP54803 685 aa7.58□□□□□ -1.2
ATG4D-210ENST00000588972 EIF3BP55884 814 aaKnown RBP7.58□□□□□ -1.2
ATG4D-210ENST00000588972 IFI35P80217 286 aaPredicted RBP7.58□□□□□ -1.2
ATG4D-210ENST00000588972 CDH18Q13634 790 aa7.58□□□□□ -1.2
ATG4D-210ENST00000588972 IL13RA2Q14627 380 aa7.58□□□□□ -1.2
ATG4D-210ENST00000588972 PRKD1Q15139 912 aaPredicted RBP7.58□□□□□ -1.2
ATG4D-210ENST00000588972 HLA-BQ31612 363 aa7.58□□□□□ -1.2
ATG4D-210ENST00000588972 TBC1D25Q3MII6 688 aa7.58□□□□□ -1.2
ATG4D-210ENST00000588972 FUT11Q495W5 492 aa7.58□□□□□ -1.2
ATG4D-210ENST00000588972 TIGD2Q4W5G0 525 aa7.58□□□□□ -1.2
ATG4D-210ENST00000588972 RNASE12Q5GAN4 147 aaKnown RBP7.58□□□□□ -1.2
ATG4D-210ENST00000588972 RABGAP1LQ5R372 815 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms