RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 CACNB4O00305 520 aaPredicted RBP8.47□□□□□ -1.05
SMAD4-206ENST00000588860 SLC31A1O15431 190 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 MBTPS2O43462 519 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 ASGR2P07307 311 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 PRPS2P11908 318 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 SLC6A2P23975 617 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 TRIM23P36406 574 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 CLCNKAP51800 687 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 CLNS1AP54105 237 aaKnown RBP8.47□□□□□ -1.05
SMAD4-206ENST00000588860 MRPS22P82650 360 aaKnown RBP8.47□□□□□ -1.05
SMAD4-206ENST00000588860 ZNF33BQ06732 778 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 PCDH1Q08174 1060 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 SFSWAPQ12872 951 aaKnown RBP8.47□□□□□ -1.05
SMAD4-206ENST00000588860 TRIM25Q14258 630 aaKnown RBP8.47□□□□□ -1.05
SMAD4-206ENST00000588860 SLBPQ14493 270 aaKnown RBP eCLIP8.47□□□□□ -1.05
SMAD4-206ENST00000588860 TAF11Q15544 211 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 PRAMEF14Q5SWL7 426 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 THEMIS2Q5TEJ8 643 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 PRAMEF13Q5VWM6 474 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 METRNLQ641Q3 311 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 ZFP1Q6P2D0 407 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 SLCO4C1Q6ZQN7 724 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 USP30Q70CQ3 517 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 CHST15Q7LFX5 561 aaPredicted RBP8.47□□□□□ -1.05
SMAD4-206ENST00000588860 ARPINQ7Z6K5 226 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 KBTBD6Q86V97 674 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 KRTCAP2Q8N6L1 136 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 GLB1L3Q8NCI6 653 aaPredicted RBP8.47□□□□□ -1.05
SMAD4-206ENST00000588860 WDR20Q8TBZ3 569 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 NUDT8Q8WV74 236 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 FAM3CQ92520 227 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 TFGQ92734 400 aaPredicted RBP8.47□□□□□ -1.05
SMAD4-206ENST00000588860 NEIL2Q969S2 332 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 RAD51AP1Q96B01 352 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 REPS1Q96D71 796 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 APIPQ96GX9 242 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 APOLD1Q96LR9 279 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 LRGUKQ96M69 825 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 ANKRD27Q96NW4 1050 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 TIMM29Q9BSF4 260 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 APOOQ9BUR5 198 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 TMUB1Q9BVT8 246 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 SGPP1Q9BX95 441 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 TRIM15Q9C019 465 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 TRIT1Q9H3H1 467 aaKnown RBP8.47□□□□□ -1.05
SMAD4-206ENST00000588860 OSGEPL1Q9H4B0 414 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 CLMPQ9H6B4 373 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 RMI1Q9H9A7 625 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 NMRK1Q9NWW6 199 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 ABCD2Q9UBJ2 740 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 ACSL5Q9ULC5 683 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 DLGAP4Q9Y2H0 992 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 TMED5Q9Y3A6 229 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 GPSM3Q9Y4H4 160 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 PCDHA9Q9Y5H5 950 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 ARHGEF17Q96PE2 2063 aaPredicted RBP8.47□□□□□ -1.05
SMAD4-206ENST00000588860 EPG5Q9HCE0 2579 aa8.46□□□□□ -1.05
SMAD4-206ENST00000588860 NPIPB8E9PQR5 432 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 DNAJA2O60884 412 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 MYO1DO94832 1006 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 NPPAP01160 153 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 IL6P05231 212 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 CEACAM5P06731 702 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 C8BP07358 591 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 C1GALT1C1LP0DN25 315 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 CDH1P12830 882 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 HSD3B1P14060 373 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 HSD17B1P14061 328 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 GLULP15104 373 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 ACPPP15309 386 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 NPPBP16860 134 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 AMD1P17707 334 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 SDC1P18827 310 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 NDUFV2P19404 249 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 ATP6V1B2P21281 511 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 HSD3B2P26439 372 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 RPL10P27635 214 aaKnown RBP8.46□□□□□ -1.06
SMAD4-206ENST00000588860 EEFSECP57772 596 aaKnown RBP8.46□□□□□ -1.06
SMAD4-206ENST00000588860 PLIN5Q00G26 463 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 DMPKQ09013 629 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 BNIP2Q12982 314 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 PWP1Q13610 501 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 KIAA0040Q15053 153 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 HIST2H2ACQ16777 129 aaPredicted RBP8.46□□□□□ -1.06
SMAD4-206ENST00000588860 FAM174BQ3ZCQ3 159 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 FBXO43Q4G163 708 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 PAGE2BQ5JRK9 111 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 SPANXN4Q5MJ08 99 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 C6orf10Q5SRN2 563 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 CATSPEREQ5SY80 951 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 SWT1Q5T5J6 900 aaKnown RBP8.46□□□□□ -1.06
SMAD4-206ENST00000588860 ATG9BQ674R7 924 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 HIST2H2AA3Q6FI13 130 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 NOXRED1Q6NXP6 359 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 DUS1LQ6P1R4 473 aaKnown RBP8.46□□□□□ -1.06
SMAD4-206ENST00000588860 MED27Q6P2C8 311 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 CYP2R1Q6VVX0 501 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 DHFR2Q86XF0 187 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 SLC15A3Q8IY34 581 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 LRRC56Q8IYG6 542 aaPredicted RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms