RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 B3GNT4Q9C0J1 378 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 DRC3Q9H069 523 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 ILKAPQ9H0C8 392 aaPredicted RBP7.6□□□□□ -1.19
VMP1-204ENST00000587259 TFB2MQ9H5Q4 396 aaKnown RBP7.6□□□□□ -1.19
VMP1-204ENST00000587259 PFDN4Q9NQP4 134 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 PRDM8Q9NQV8 689 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 SAR1AQ9NR31 198 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 SMOXQ9NWM0 555 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 KCTD5Q9NXV2 234 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 SCHIP1Q9P0W5 487 aaPredicted RBP7.6□□□□□ -1.19
VMP1-204ENST00000587259 LUZP4Q9P127 313 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 MARCH4Q9P2E8 410 aaPredicted RBP7.6□□□□□ -1.19
VMP1-204ENST00000587259 KLHL42Q9P2K6 505 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 FKBPLQ9UIM3 349 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 CRLS1Q9UJA2 301 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 ZFP69BQ9UJL9 534 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 HAO1Q9UJM8 370 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 TUBD1Q9UJT1 453 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 CROTQ9UKG9 612 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 SLC12A4Q9UP95 1085 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 TRIM33Q9UPN9 1127 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 STK38LQ9Y2H1 464 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 CRYL1Q9Y2S2 319 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 RAP2CQ9Y3L5 183 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 KCNMB2Q9Y691 235 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 TNRC6AQ8NDV7 1962 aaKnown RBP7.6□□□□□ -1.19
VMP1-204ENST00000587259 UNC79Q9P2D8 2635 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 SPTBN1Q01082 2364 aaKnown RBP7.59□□□□□ -1.19
VMP1-204ENST00000587259 TRBV5-4A0A0C4DH59 114 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 CDC14CA4D256 554 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 OR51F1A6NGY5 319 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 TRPC5OSA6NMA1 111 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 AGAP14A8MT82 685 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 FADS2P1A8MWK0 482 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 TARM1B6A8C7 271 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 G3V2L1 256 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 H0YHG0 523 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 AURKAO14965 403 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 KPNA5O15131 536 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 POLR1CO15160 346 aaPredicted RBP7.59□□□□□ -1.19
VMP1-204ENST00000587259 ST8SIA5O15466 376 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 KERAO60938 352 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 SEMA7AO75326 666 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 DNAJC8O75937 253 aaPredicted RBP7.59□□□□□ -1.19
VMP1-204ENST00000587259 WISP3O95389 354 aaPredicted RBP7.59□□□□□ -1.19
VMP1-204ENST00000587259 TIAF1O95411 115 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 CLDN7O95471 211 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 NTRK1P04629 796 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 CBSLP0DN79 551 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 ACRV1P26436 265 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 MAP4P27816 1152 aaKnown RBP7.59□□□□□ -1.19
VMP1-204ENST00000587259 CBSP35520 551 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 FASLGP48023 281 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 RAB15P59190 212 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 IL2P60568 153 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 PPP1CAP62136 330 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 RPS18P62269 152 aaKnown RBP7.59□□□□□ -1.19
VMP1-204ENST00000587259 IRX1P78414 480 aaPredicted RBP7.59□□□□□ -1.19
VMP1-204ENST00000587259 GPLD1P80108 840 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 XIAPP98170 497 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 CHAF1BQ13112 559 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 SQSTM1Q13501 440 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 PEX6Q13608 980 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 ZRSR2Q15696 482 aaKnown RBP7.59□□□□□ -1.19
VMP1-204ENST00000587259 PRR30Q53SZ7 412 aaPredicted RBP7.59□□□□□ -1.19
VMP1-204ENST00000587259 METTL21CQ5VZV1 264 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 CEACAM20Q6UY09 585 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 ADAMTSL4Q6UY14 1074 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 ASB18Q6ZVZ8 466 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 TAS2R42Q7RTR8 314 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 ADAMTSL2Q86TH1 951 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 GALNT13Q8IUC8 556 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 OR6Y1Q8NGX8 325 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 NXNL1Q96CM4 212 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 ERP27Q96DN0 273 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 CATSPER2Q96P56 530 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 TGM7Q96PF1 710 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 RAB3IPQ96QF0 476 aaPredicted RBP7.59□□□□□ -1.19
VMP1-204ENST00000587259 OLFM1Q99784 485 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 ZSCAN5AQ9BUG6 496 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 TMEM120AQ9BXJ8 343 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 C12orf65Q9H3J6 166 aaKnown RBP7.59□□□□□ -1.19
VMP1-204ENST00000587259 ASB8Q9H765 288 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 AKIRIN1Q9H9L7 192 aaPredicted RBP7.59□□□□□ -1.19
VMP1-204ENST00000587259 IGSF5Q9NSI5 407 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 SIDT1Q9NXL6 827 aaKnown RBP7.59□□□□□ -1.19
VMP1-204ENST00000587259 PDP2Q9P2J9 529 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 PLEKHB1Q9UF11 243 aaPredicted RBP7.59□□□□□ -1.19
VMP1-204ENST00000587259 CNOT6Q9ULM6 557 aaKnown RBP7.59□□□□□ -1.19
VMP1-204ENST00000587259 TMEM184BQ9Y519 407 aaPredicted RBP7.59□□□□□ -1.19
VMP1-204ENST00000587259 KCTD3Q9Y597 815 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 MYO9AB2RTY4 2548 aa7.59□□□□□ -1.19
VMP1-204ENST00000587259 A6NCN8 305 aa7.58□□□□□ -1.2
VMP1-204ENST00000587259 STX16-NPEPL1H3BU86 382 aa7.58□□□□□ -1.2
VMP1-204ENST00000587259 CCL22O00626 93 aa7.58□□□□□ -1.2
VMP1-204ENST00000587259 STX16O14662 325 aa7.58□□□□□ -1.2
VMP1-204ENST00000587259 SLC22A2O15244 555 aa7.58□□□□□ -1.2
VMP1-204ENST00000587259 BUD23O43709 281 aaKnown RBP7.58□□□□□ -1.2
VMP1-204ENST00000587259 AGFG2O95081 481 aa7.58□□□□□ -1.2
VMP1-204ENST00000587259 UNC5CO95185 931 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms