RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 ATP6V1E2Q96A05 226 aa12.22□□□□□ -0.45
VMP1-202ENST00000585847 REPS1Q96D71 796 aa12.22□□□□□ -0.45
VMP1-202ENST00000585847 C19orf60Q96EN9 201 aa12.22□□□□□ -0.45
VMP1-202ENST00000585847 RILPQ96NA2 401 aa12.22□□□□□ -0.45
VMP1-202ENST00000585847 TMEM79Q9BSE2 394 aa12.22□□□□□ -0.45
VMP1-202ENST00000585847 C20orf27Q9GZN8 174 aa12.22□□□□□ -0.45
VMP1-202ENST00000585847 KCNK13Q9HB14 408 aa12.22□□□□□ -0.45
VMP1-202ENST00000585847 TXLNGQ9NUQ3 528 aa12.22□□□□□ -0.45
VMP1-202ENST00000585847 CPNE7Q9UBL6 633 aa12.22□□□□□ -0.45
VMP1-202ENST00000585847 TSR3Q9UJK0 312 aaKnown RBP12.22□□□□□ -0.45
VMP1-202ENST00000585847 DCTN4Q9UJW0 460 aa12.22□□□□□ -0.45
VMP1-202ENST00000585847 ASF1AQ9Y294 204 aa12.22□□□□□ -0.45
VMP1-202ENST00000585847 ZZEF1O43149 2961 aa12.22□□□□□ -0.45
VMP1-202ENST00000585847 UNC13CQ8NB66 2214 aa12.22□□□□□ -0.45
VMP1-202ENST00000585847 SERTM1A2A2V5 107 aa12.21□□□□□ -0.45
VMP1-202ENST00000585847 FAM221BA6H8Z2 402 aa12.21□□□□□ -0.45
VMP1-202ENST00000585847 ZNF195O14628 629 aa12.21□□□□□ -0.45
VMP1-202ENST00000585847 B4GAT1O43505 415 aa12.21□□□□□ -0.45
VMP1-202ENST00000585847 DKK1O94907 266 aa12.21□□□□□ -0.45
VMP1-202ENST00000585847 FKBP9O95302 570 aa12.21□□□□□ -0.45
VMP1-202ENST00000585847 SIX3O95343 332 aaPredicted RBP12.21□□□□□ -0.45
VMP1-202ENST00000585847 CLDN9O95484 217 aa12.21□□□□□ -0.45
VMP1-202ENST00000585847 GUCA1CO95843 209 aa12.21□□□□□ -0.45
VMP1-202ENST00000585847 HSD3B1P14060 373 aa12.21□□□□□ -0.45
VMP1-202ENST00000585847 ACPPP15309 386 aa12.21□□□□□ -0.45
VMP1-202ENST00000585847 CKMT2P17540 419 aa12.21□□□□□ -0.45
VMP1-202ENST00000585847 HRH2P25021 359 aa12.21□□□□□ -0.45
VMP1-202ENST00000585847 HSD3B2P26439 372 aa12.21□□□□□ -0.45
VMP1-202ENST00000585847 GSTM2P28161 218 aa12.21□□□□□ -0.45
VMP1-202ENST00000585847 ARRB2P32121 409 aa12.21□□□□□ -0.45
VMP1-202ENST00000585847 CASP2P42575 452 aa12.21□□□□□ -0.45
VMP1-202ENST00000585847 ATP4BP51164 291 aa12.21□□□□□ -0.45
VMP1-202ENST00000585847 HHEXQ03014 270 aa12.21□□□□□ -0.45
VMP1-202ENST00000585847 LAPTM5Q13571 262 aa12.21□□□□□ -0.45
VMP1-202ENST00000585847 E2F2Q14209 437 aa12.21□□□□□ -0.45
VMP1-202ENST00000585847 KRT72Q14CN4 511 aa12.21□□□□□ -0.45
VMP1-202ENST00000585847 ZRSR2Q15696 482 aaKnown RBP12.21□□□□□ -0.45
VMP1-202ENST00000585847 INAVAQ3KP66 663 aa12.21□□□□□ -0.45
VMP1-202ENST00000585847 CCSMST1Q4G0I0 132 aa12.21□□□□□ -0.45
VMP1-202ENST00000585847 PAGE2BQ5JRK9 111 aa12.21□□□□□ -0.45
VMP1-202ENST00000585847 AGTRAPQ6RW13 159 aa12.21□□□□□ -0.45
VMP1-202ENST00000585847 GOLGA7Q7Z5G4 137 aa12.21□□□□□ -0.45
VMP1-202ENST00000585847 SLCO6A1Q86UG4 719 aa12.21□□□□□ -0.45
VMP1-202ENST00000585847 TEX9Q8N6V9 391 aa12.21□□□□□ -0.45
VMP1-202ENST00000585847 L3MBTL4Q8NA19 623 aa12.21□□□□□ -0.45
VMP1-202ENST00000585847 OR5AR1Q8NGP9 310 aa12.21□□□□□ -0.45
VMP1-202ENST00000585847 TRPC4APQ8TEL6 797 aa12.21□□□□□ -0.45
VMP1-202ENST00000585847 MENTQ9BUN1 341 aa12.21□□□□□ -0.45
VMP1-202ENST00000585847 EFCAB11Q9BUY7 163 aa12.21□□□□□ -0.45
VMP1-202ENST00000585847 SGPP1Q9BX95 441 aa12.21□□□□□ -0.45
VMP1-202ENST00000585847 TWSG1Q9GZX9 223 aa12.21□□□□□ -0.45
VMP1-202ENST00000585847 IPPKQ9H8X2 491 aa12.21□□□□□ -0.45
VMP1-202ENST00000585847 ACTR5Q9H9F9 607 aaPredicted RBP12.21□□□□□ -0.45
VMP1-202ENST00000585847 SLC40A1Q9NP59 571 aa12.21□□□□□ -0.45
VMP1-202ENST00000585847 CCDC177Q9NQR7 707 aaPredicted RBP12.21□□□□□ -0.45
VMP1-202ENST00000585847 POT1Q9NUX5 634 aa12.21□□□□□ -0.45
VMP1-202ENST00000585847 IMP3Q9NV31 184 aaKnown RBP12.21□□□□□ -0.45
VMP1-202ENST00000585847 STOX2Q9P2F5 926 aaPredicted RBP12.21□□□□□ -0.45
VMP1-202ENST00000585847 FTSJ1Q9UET6 329 aa12.21□□□□□ -0.45
VMP1-202ENST00000585847 MARCOQ9UEW3 520 aaPredicted RBP12.21□□□□□ -0.45
VMP1-202ENST00000585847 SNX6Q9UNH7 406 aa12.21□□□□□ -0.45
VMP1-202ENST00000585847 TSC22D4Q9Y3Q8 395 aa12.21□□□□□ -0.45
VMP1-202ENST00000585847 KRT87PA6NCN2 255 aa12.2□□□□□ -0.46
VMP1-202ENST00000585847 NPIPB8E9PQR5 432 aa12.2□□□□□ -0.46
VMP1-202ENST00000585847 CLGNO14967 610 aa12.2□□□□□ -0.46
VMP1-202ENST00000585847 TAPBPO15533 448 aa12.2□□□□□ -0.46
VMP1-202ENST00000585847 TNFSF14O43557 240 aa12.2□□□□□ -0.46
VMP1-202ENST00000585847 NUDT21O43809 227 aaKnown RBP12.2□□□□□ -0.46
VMP1-202ENST00000585847 CCNT2O60583 730 aaKnown RBP12.2□□□□□ -0.46
VMP1-202ENST00000585847 DIAPH2O60879 1101 aa12.2□□□□□ -0.46
VMP1-202ENST00000585847 CCNDBP1O95273 360 aa12.2□□□□□ -0.46
VMP1-202ENST00000585847 HGFP14210 728 aa12.2□□□□□ -0.46
VMP1-202ENST00000585847 EZRP15311 586 aaKnown RBP12.2□□□□□ -0.46
VMP1-202ENST00000585847 PNLIPP16233 465 aa12.2□□□□□ -0.46
VMP1-202ENST00000585847 GLB1P16278 677 aa12.2□□□□□ -0.46
VMP1-202ENST00000585847 PRDX6P30041 224 aa12.2□□□□□ -0.46
VMP1-202ENST00000585847 BDKRB1P46663 353 aa12.2□□□□□ -0.46
VMP1-202ENST00000585847 HSPA7P48741 367 aa12.2□□□□□ -0.46
VMP1-202ENST00000585847 MRPL19P49406 292 aaKnown RBP12.2□□□□□ -0.46
VMP1-202ENST00000585847 IDH3AP50213 366 aa12.2□□□□□ -0.46
VMP1-202ENST00000585847 RAB28P51157 221 aa12.2□□□□□ -0.46
VMP1-202ENST00000585847 SH3BP2P78314 561 aa12.2□□□□□ -0.46
VMP1-202ENST00000585847 CFHR1Q03591 330 aa12.2□□□□□ -0.46
VMP1-202ENST00000585847 MAD2L1Q13257 205 aaPredicted RBP12.2□□□□□ -0.46
VMP1-202ENST00000585847 MAPRE2Q15555 327 aa12.2□□□□□ -0.46
VMP1-202ENST00000585847 CYP2A13Q16696 494 aa12.2□□□□□ -0.46
VMP1-202ENST00000585847 PTCHD3Q3KNS1 767 aa12.2□□□□□ -0.46
VMP1-202ENST00000585847 LACTB2Q53H82 288 aaPredicted RBP12.2□□□□□ -0.46
VMP1-202ENST00000585847 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.2□□□□□ -0.46
VMP1-202ENST00000585847 OGFOD2Q6N063 350 aa12.2□□□□□ -0.46
VMP1-202ENST00000585847 TMEM26Q6ZUK4 368 aa12.2□□□□□ -0.46
VMP1-202ENST00000585847 MILR1Q7Z6M3 343 aa12.2□□□□□ -0.46
VMP1-202ENST00000585847 CLNKQ7Z7G1 428 aa12.2□□□□□ -0.46
VMP1-202ENST00000585847 SLC9B2Q86UD5 537 aa12.2□□□□□ -0.46
VMP1-202ENST00000585847 RFWD2Q8NHY2 731 aa12.2□□□□□ -0.46
VMP1-202ENST00000585847 IFI44Q8TCB0 444 aa12.2□□□□□ -0.46
VMP1-202ENST00000585847 JPH3Q8WXH2 748 aaPredicted RBP12.2□□□□□ -0.46
VMP1-202ENST00000585847 SMPDL3AQ92484 453 aa12.2□□□□□ -0.46
VMP1-202ENST00000585847 CCDC74AQ96AQ1 378 aa12.2□□□□□ -0.46
VMP1-202ENST00000585847 WDR34Q96EX3 536 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms