RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 SCN3AQ9NY46 2000 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 MN1Q10571 1320 aaPredicted RBP9.17□□□□□ -0.94
RFFL-210ENST00000582308 IGHV5-51A0A0C4DH38 117 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 A0A0J9YY10 115 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 TMEM114B3SHH9 223 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 E7EQ34 232 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 H7BY64 318 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 MATN2O00339 956 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 KLF11O14901 512 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 CLGNO14967 610 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 ZW10O43264 779 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 KIF1CO43896 1103 aaKnown RBP9.17□□□□□ -0.94
RFFL-210ENST00000582308 NRP2O60462 931 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 PRAMEF10O60809 474 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 SNNO75324 88 aaPredicted RBP9.17□□□□□ -0.94
RFFL-210ENST00000582308 KATNA1O75449 491 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 LYPLA1O75608 230 aaPredicted RBP9.17□□□□□ -0.94
RFFL-210ENST00000582308 WFS1O76024 890 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 CCNDBP1O95273 360 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 FKBP9O95302 570 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 CPNE6O95741 557 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 MLYCDO95822 493 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 C9P02748 559 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 C1GALT1C1LP0DN25 315 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 GNAZP19086 355 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 CD22P20273 847 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 MPSTP25325 297 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 VARSP26640 1264 aaKnown RBP9.17□□□□□ -0.94
RFFL-210ENST00000582308 CMPK1P30085 196 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 SERPINB5P36952 375 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 GRIA3P42263 894 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 CASP2P42575 452 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 SLC1A6P48664 564 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 CCNG1P51959 295 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 ERVPABLB-1P60509 514 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 ABCE1P61221 599 aaKnown RBP9.17□□□□□ -0.94
RFFL-210ENST00000582308 ABATP80404 500 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 IRF8Q02556 426 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 LCP2Q13094 533 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 CHIT1Q13231 466 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 DOC2AQ14183 400 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 E2F2Q14209 437 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 TRIP6Q15654 476 aaKnown RBP9.17□□□□□ -0.94
RFFL-210ENST00000582308 ZIC1Q15915 447 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 ATG9BQ674R7 924 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 ATG16L1Q676U5 607 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 TTC19Q6DKK2 380 aaPredicted RBP9.17□□□□□ -0.94
RFFL-210ENST00000582308 FCRL6Q6DN72 434 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 ZNF425Q6IV72 752 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 LETMD1Q6P1Q0 360 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 FIGLAQ6QHK4 219 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 NXPE4Q6UWF7 544 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 RGS9BPQ6ZS82 235 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 GPRIN3Q6ZVF9 776 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 TMPRSS11BQ86T26 416 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 SYVN1Q86TM6 617 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 FAM129CQ86XR2 697 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 PLXDC1Q8IUK5 500 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 TRIM42Q8IWZ5 723 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 DCBLD1Q8N8Z6 715 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 OR4K1Q8NGD4 311 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 RAB3IL1Q8TBN0 382 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 NETO1Q8TDF5 533 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 LRRC8CQ8TDW0 803 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 AGAP11Q8TF27 550 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 WDR34Q96EX3 536 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 ZDHHC12Q96GR4 267 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 PRR11Q96HE9 360 aaPredicted RBP9.17□□□□□ -0.94
RFFL-210ENST00000582308 PRAP1Q96NZ9 151 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 CDK15Q96Q40 435 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 ZNF382Q96SR6 550 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 SORT1Q99523 831 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 DPH7Q9BTV6 452 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 TRMOQ9BU70 441 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 NTMT1Q9BV86 223 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 CAPS2Q9BXY5 557 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 SHCBP1LQ9BZQ2 653 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 KLHL25Q9H0H3 589 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 SPNS1Q9H2V7 528 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 SEMA6CQ9H3T2 930 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 MRPS30Q9NP92 439 aaKnown RBP9.17□□□□□ -0.94
RFFL-210ENST00000582308 SEMA5BQ9P283 1151 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 PDP2Q9P2J9 529 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 RNF11Q9Y3C5 154 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 KLK4Q9Y5K2 254 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 PIEZO1Q92508 2521 aa9.17□□□□□ -0.94
RFFL-210ENST00000582308 KCNE1BA0A087WTH5 132 aa9.16□□□□□ -0.94
RFFL-210ENST00000582308 OR2A25A4D2G3 310 aa9.16□□□□□ -0.94
RFFL-210ENST00000582308 TLCD2A6NGC4 264 aa9.16□□□□□ -0.94
RFFL-210ENST00000582308 SLC9B1P1A6NJY1 282 aa9.16□□□□□ -0.94
RFFL-210ENST00000582308 SLC30A4O14863 429 aa9.16□□□□□ -0.94
RFFL-210ENST00000582308 RFPL3O75679 317 aa9.16□□□□□ -0.94
RFFL-210ENST00000582308 OR4F21O95013 312 aa9.16□□□□□ -0.94
RFFL-210ENST00000582308 CLDN9O95484 217 aa9.16□□□□□ -0.94
RFFL-210ENST00000582308 OTCP00480 354 aa9.16□□□□□ -0.94
RFFL-210ENST00000582308 ST6GAL1P15907 406 aa9.16□□□□□ -0.94
RFFL-210ENST00000582308 MAGP20916 626 aa9.16□□□□□ -0.94
RFFL-210ENST00000582308 CSRP1P21291 193 aaKnown RBP9.16□□□□□ -0.94
RFFL-210ENST00000582308 CDH3P22223 829 aa9.16□□□□□ -0.94
RFFL-210ENST00000582308 CCR8P51685 355 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms