RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 LIPHQ8WWY8 451 aa3.9□□□□□ -1.79
SMG8-205ENST00000580798 IRGQQ8WZA9 623 aa3.9□□□□□ -1.79
SMG8-205ENST00000580798 KIAA1143Q96AT1 154 aaPredicted RBP3.9□□□□□ -1.79
SMG8-205ENST00000580798 TMCO6Q96DC7 493 aa3.9□□□□□ -1.79
SMG8-205ENST00000580798 PGAM5Q96HS1 289 aa3.9□□□□□ -1.79
SMG8-205ENST00000580798 C12orf66Q96MD2 445 aa3.9□□□□□ -1.79
SMG8-205ENST00000580798 BBS4Q96RK4 519 aa3.9□□□□□ -1.79
SMG8-205ENST00000580798 FIZ1Q96SL8 496 aa3.9□□□□□ -1.79
SMG8-205ENST00000580798 PARK7Q99497 189 aaKnown RBP3.9□□□□□ -1.79
SMG8-205ENST00000580798 PIP5K1AQ99755 562 aa3.9□□□□□ -1.79
SMG8-205ENST00000580798 EGFL8Q99944 293 aa3.9□□□□□ -1.79
SMG8-205ENST00000580798 RBM4BQ9BQ04 359 aaKnown RBP3.9□□□□□ -1.79
SMG8-205ENST00000580798 UBAC1Q9BSL1 405 aa3.9□□□□□ -1.79
SMG8-205ENST00000580798 RBM4Q9BWF3 364 aaKnown RBP3.9□□□□□ -1.79
SMG8-205ENST00000580798 MS4A7Q9GZW8 240 aaPredicted RBP3.9□□□□□ -1.79
SMG8-205ENST00000580798 DDX47Q9H0S4 455 aaKnown RBP3.9□□□□□ -1.79
SMG8-205ENST00000580798 MTIF3Q9H2K0 278 aaKnown RBP3.9□□□□□ -1.79
SMG8-205ENST00000580798 FOXP1Q9H334 677 aaPredicted RBP3.9□□□□□ -1.79
SMG8-205ENST00000580798 OSGEPL1Q9H4B0 414 aa3.9□□□□□ -1.79
SMG8-205ENST00000580798 RGCCQ9H4X1 137 aa3.9□□□□□ -1.79
SMG8-205ENST00000580798 METTL8Q9H825 291 aaKnown RBP3.9□□□□□ -1.79
SMG8-205ENST00000580798 ECT2Q9H8V3 914 aa3.9□□□□□ -1.79
SMG8-205ENST00000580798 COG4Q9H9E3 785 aa3.9□□□□□ -1.79
SMG8-205ENST00000580798 GBA2Q9HCG7 927 aaPredicted RBP3.9□□□□□ -1.79
SMG8-205ENST00000580798 CNGB3Q9NQW8 809 aa3.9□□□□□ -1.79
SMG8-205ENST00000580798 TLR8Q9NR97 1041 aaKnown RBP3.9□□□□□ -1.79
SMG8-205ENST00000580798 FAM212BQ9NTI7 297 aaPredicted RBP3.9□□□□□ -1.79
SMG8-205ENST00000580798 MRPL22Q9NWU5 206 aaKnown RBP3.9□□□□□ -1.79
SMG8-205ENST00000580798 NDE1Q9NXR1 346 aa3.9□□□□□ -1.79
SMG8-205ENST00000580798 STK32BQ9NY57 414 aa3.9□□□□□ -1.79
SMG8-205ENST00000580798 RBAKQ9NYW8 714 aaPredicted RBP3.9□□□□□ -1.79
SMG8-205ENST00000580798 MGAT4CQ9UBM8 478 aa3.9□□□□□ -1.79
SMG8-205ENST00000580798 PEF1Q9UBV8 284 aaKnown RBP3.9□□□□□ -1.79
SMG8-205ENST00000580798 CIDEBQ9UHD4 219 aa3.9□□□□□ -1.79
SMG8-205ENST00000580798 TRMT6Q9UJA5 497 aaKnown RBP3.9□□□□□ -1.79
SMG8-205ENST00000580798 CA14Q9ULX7 337 aa3.9□□□□□ -1.79
SMG8-205ENST00000580798 PLEKHA6Q9Y2H5 1048 aa3.9□□□□□ -1.79
SMG8-205ENST00000580798 NFE2L3Q9Y4A8 694 aa3.9□□□□□ -1.79
SMG8-205ENST00000580798 TEX264Q9Y6I9 313 aa3.9□□□□□ -1.79
SMG8-205ENST00000580798 V9GYQ6 96 aa3.9□□□□□ -1.79
SMG8-205ENST00000580798 NCOA3Q9Y6Q9 1424 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 LOC390937A0A1W2PQ73 354 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 FAM149AA5PLN7 773 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 HELTA6NFD8 242 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 SMCO2A6NFE2 343 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 ARGFXA6NJG6 315 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 BECN2A8MW95 431 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 K7EQM0 130 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 LGALS8O00214 317 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 GRM8O00222 908 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 BTN3A1O00481 513 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 ARHGEF9O43307 516 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 PMPCBO75439 489 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 CLPXO76031 633 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 SORBS2O94875 1100 aaKnown RBP3.89□□□□□ -1.79
SMG8-205ENST00000580798 VNN2O95498 520 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 IL1BP01584 269 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 MBP02144 154 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 UGT2B4P06133 528 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 SERPINF2P08697 491 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 RPS17P08708 135 aaKnown RBP3.89□□□□□ -1.79
SMG8-205ENST00000580798 CCDC166P0CW27 439 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 CD19P15391 556 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 RPA2P15927 270 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 HOXB8P17481 243 aaPredicted RBP3.89□□□□□ -1.79
SMG8-205ENST00000580798 TCN1P20061 433 aaPredicted RBP3.89□□□□□ -1.79
SMG8-205ENST00000580798 CCNOP22674 350 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 GPTP24298 496 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 GABRB3P28472 473 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 CRABP2P29373 138 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 CCND3P30281 292 aaPredicted RBP3.89□□□□□ -1.79
SMG8-205ENST00000580798 CDC25AP30304 524 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 HLA-FP30511 346 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 MC5RP33032 325 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 COPB1P53618 953 aaKnown RBP3.89□□□□□ -1.79
SMG8-205ENST00000580798 P2RX3P56373 397 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 SUMO2P61956 95 aaKnown RBP3.89□□□□□ -1.79
SMG8-205ENST00000580798 GALK2Q01415 458 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 GLO1Q04760 184 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 RASGEF1BQ0VAM2 473 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 TRAF2Q12933 501 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 CTBP1Q13363 440 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 MAB21L1Q13394 359 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 CUL3Q13618 768 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 RAB32Q13637 225 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 SGCBQ16585 318 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 PDK4Q16654 411 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 SGSM1Q2NKQ1 1148 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 PRICKLE4Q2TBC4 344 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 PLEKHO1Q53GL0 409 aaPredicted RBP3.89□□□□□ -1.79
SMG8-205ENST00000580798 ZNF789Q5FWF6 425 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 PAGE2BQ5JRK9 111 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 ZNF484Q5JVG2 852 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 PHYHD1Q5SRE7 291 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 CERCAMQ5T4B2 595 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 UBAP2Q5T6F2 1119 aaKnown RBP3.89□□□□□ -1.79
SMG8-205ENST00000580798 C18orf63Q68DL7 685 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 KCTD11Q693B1 232 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 KRT39Q6A163 491 aa3.89□□□□□ -1.79
SMG8-205ENST00000580798 OR6B2Q6IFH4 312 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms