RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 PRDX1Q06830 199 aaKnown RBP20.32■□□□□ 0.84
CSNK1D-215ENST00000580784 NAA25Q14CX7 972 aa20.32■□□□□ 0.84
CSNK1D-215ENST00000580784 INPP5JQ15735 1006 aaPredicted RBP20.32■□□□□ 0.84
CSNK1D-215ENST00000580784 ICE2Q659A1 982 aa20.32■□□□□ 0.84
CSNK1D-215ENST00000580784 KCNMB4Q86W47 210 aa20.32■□□□□ 0.84
CSNK1D-215ENST00000580784 PAQR7Q86WK9 346 aa20.32■□□□□ 0.84
CSNK1D-215ENST00000580784 CPNE9Q8IYJ1 553 aa20.32■□□□□ 0.84
CSNK1D-215ENST00000580784 FBXO15Q8NCQ5 510 aaPredicted RBP20.32■□□□□ 0.84
CSNK1D-215ENST00000580784 CD200R1Q8TD46 325 aa20.32■□□□□ 0.84
CSNK1D-215ENST00000580784 COL26A1Q96A83 441 aa20.32■□□□□ 0.84
CSNK1D-215ENST00000580784 PNPLA2Q96AD5 504 aa20.32■□□□□ 0.84
CSNK1D-215ENST00000580784 NACC2Q96BF6 587 aa20.32■□□□□ 0.84
CSNK1D-215ENST00000580784 AARSD1Q9BTE6 412 aaKnown RBP20.32■□□□□ 0.84
CSNK1D-215ENST00000580784 ASIC3Q9UHC3 531 aa20.32■□□□□ 0.84
CSNK1D-215ENST00000580784 FBXL4Q9UKA2 621 aa20.32■□□□□ 0.84
CSNK1D-215ENST00000580784 HS3ST3B1Q9Y662 390 aa20.32■□□□□ 0.84
CSNK1D-215ENST00000580784 COMMD10Q9Y6G5 202 aa20.32■□□□□ 0.84
CSNK1D-215ENST00000580784 VSTM2BA6NLU5 285 aa20.31■□□□□ 0.84
CSNK1D-215ENST00000580784 ZNF839A8K0R7 811 aa20.31■□□□□ 0.84
CSNK1D-215ENST00000580784 DNALI1O14645 258 aaPredicted RBP20.31■□□□□ 0.84
CSNK1D-215ENST00000580784 ZBTB14O43829 449 aa20.31■□□□□ 0.84
CSNK1D-215ENST00000580784 ERVK-10P10266 1014 aa20.31■□□□□ 0.84
CSNK1D-215ENST00000580784 ENO3P13929 434 aaPredicted RBP20.31■□□□□ 0.84
CSNK1D-215ENST00000580784 PGAM1P18669 254 aa20.31■□□□□ 0.84
CSNK1D-215ENST00000580784 DHX9Q08211 1270 aaKnown RBP20.31■□□□□ 0.84
CSNK1D-215ENST00000580784 ESPL1Q14674 2120 aa20.31■□□□□ 0.84
CSNK1D-215ENST00000580784 CRYMQ14894 314 aa20.31■□□□□ 0.84
CSNK1D-215ENST00000580784 PRTGQ2VWP7 1150 aa20.31■□□□□ 0.84
CSNK1D-215ENST00000580784 PLEKHN1Q494U1 663 aaPredicted RBP20.31■□□□□ 0.84
CSNK1D-215ENST00000580784 MSS51Q4VC12 460 aa20.31■□□□□ 0.84
CSNK1D-215ENST00000580784 KIRREL2Q6UWL6 708 aa20.31■□□□□ 0.84
CSNK1D-215ENST00000580784 PIWIL4Q7Z3Z4 852 aaKnown RBP20.31■□□□□ 0.84
CSNK1D-215ENST00000580784 FAM26EQ8N5C1 309 aa20.31■□□□□ 0.84
CSNK1D-215ENST00000580784 GALNT11Q8NCW6 608 aa20.31■□□□□ 0.84
CSNK1D-215ENST00000580784 C10orf90Q96M02 699 aa20.31■□□□□ 0.84
CSNK1D-215ENST00000580784 FAM167BQ9BTA0 163 aa20.31■□□□□ 0.84
CSNK1D-215ENST00000580784 ZBTB20Q9HC78 741 aaPredicted RBP20.31■□□□□ 0.84
CSNK1D-215ENST00000580784 ANKMY1Q9P2S6 941 aa20.31■□□□□ 0.84
CSNK1D-215ENST00000580784 NXT1Q9UKK6 140 aaKnown RBP20.31■□□□□ 0.84
CSNK1D-215ENST00000580784 CNTRLQ7Z7A1 2325 aa20.3■□□□□ 0.84
CSNK1D-215ENST00000580784 SMAPO00193 183 aa20.3■□□□□ 0.84
CSNK1D-215ENST00000580784 VPS26AO75436 327 aa20.3■□□□□ 0.84
CSNK1D-215ENST00000580784 ALPPP05187 535 aa20.3■□□□□ 0.84
CSNK1D-215ENST00000580784 ITGA3P26006 1051 aa20.3■□□□□ 0.84
CSNK1D-215ENST00000580784 TIAL1Q01085 375 aaKnown RBP eCLIP20.3■□□□□ 0.844e-11■■■■□ 21.7
CSNK1D-215ENST00000580784 AIMP2Q13155 320 aaKnown RBP20.3■□□□□ 0.84
CSNK1D-215ENST00000580784 PTK6Q13882 451 aa20.3■□□□□ 0.84
CSNK1D-215ENST00000580784 MUM1Q2TAK8 710 aa20.3■□□□□ 0.84
CSNK1D-215ENST00000580784 ZNF425Q6IV72 752 aa20.3■□□□□ 0.84
CSNK1D-215ENST00000580784 PRMT9Q6P2P2 845 aa20.3■□□□□ 0.84
CSNK1D-215ENST00000580784 UBE2R2Q712K3 238 aaPredicted RBP20.3■□□□□ 0.84
CSNK1D-215ENST00000580784 LRRC56Q8IYG6 542 aaPredicted RBP20.3■□□□□ 0.84
CSNK1D-215ENST00000580784 CABS1Q96KC9 395 aa20.3■□□□□ 0.84
CSNK1D-215ENST00000580784 NDNQ99608 321 aa20.3■□□□□ 0.84
CSNK1D-215ENST00000580784 EBNA1BP2Q99848 306 aaKnown RBP20.3■□□□□ 0.84
CSNK1D-215ENST00000580784 MESP1Q9BRJ9 268 aa20.3■□□□□ 0.84
CSNK1D-215ENST00000580784 PCYOX1Q9UHG3 505 aa20.3■□□□□ 0.84
CSNK1D-215ENST00000580784 UTP20O75691 2785 aaKnown RBP20.3■□□□□ 0.84
CSNK1D-215ENST00000580784 USP9YO00507 2555 aaPredicted RBP20.3■□□□□ 0.84
CSNK1D-215ENST00000580784 KLHL41O60662 606 aa20.29■□□□□ 0.84
CSNK1D-215ENST00000580784 CCNDBP1O95273 360 aa20.29■□□□□ 0.84
CSNK1D-215ENST00000580784 GABRB3P28472 473 aa20.29■□□□□ 0.84
CSNK1D-215ENST00000580784 SKIV2L2P42285 1042 aaKnown RBP20.29■□□□□ 0.84
CSNK1D-215ENST00000580784 KLC1Q07866 573 aa20.29■□□□□ 0.84
CSNK1D-215ENST00000580784 RBBP7Q16576 425 aa20.29■□□□□ 0.84
CSNK1D-215ENST00000580784 HKDC1Q2TB90 917 aa20.29■□□□□ 0.84
CSNK1D-215ENST00000580784 PRAMEF13Q5VWM6 474 aa20.29■□□□□ 0.84
CSNK1D-215ENST00000580784 IGFL3Q6UXB1 125 aa20.29■□□□□ 0.84
CSNK1D-215ENST00000580784 PCGF5Q86SE9 256 aa20.29■□□□□ 0.84
CSNK1D-215ENST00000580784 IGDCC3Q8IVU1 814 aa20.29■□□□□ 0.84
CSNK1D-215ENST00000580784 PRSS58Q8IYP2 241 aa20.29■□□□□ 0.84
CSNK1D-215ENST00000580784 CSNK1A1LQ8N752 337 aa20.29■□□□□ 0.84
CSNK1D-215ENST00000580784 C2CD4AQ8NCU7 369 aaPredicted RBP20.29■□□□□ 0.84
CSNK1D-215ENST00000580784 STT3BQ8TCJ2 826 aa20.29■□□□□ 0.84
CSNK1D-215ENST00000580784 EEF1AKMT1Q8WVE0 214 aa20.29■□□□□ 0.84
CSNK1D-215ENST00000580784 SLCO2A1Q92959 643 aa20.29■□□□□ 0.84
CSNK1D-215ENST00000580784 OR2A5Q96R48 311 aa20.29■□□□□ 0.84
CSNK1D-215ENST00000580784 SEMA3GQ9NS98 782 aa20.29■□□□□ 0.84
CSNK1D-215ENST00000580784 ZNF282Q9UDV7 671 aaPredicted RBP20.29■□□□□ 0.84
CSNK1D-215ENST00000580784 RUVBL1Q9Y265 456 aaKnown RBP20.29■□□□□ 0.84
CSNK1D-215ENST00000580784 USP27XA6NNY8 438 aa20.28■□□□□ 0.84
CSNK1D-215ENST00000580784 ZGLP1P0C6A0 271 aa20.28■□□□□ 0.84
CSNK1D-215ENST00000580784 TCP1P17987 556 aaKnown RBP20.28■□□□□ 0.84
CSNK1D-215ENST00000580784 IVDP26440 423 aa20.28■□□□□ 0.84
CSNK1D-215ENST00000580784 IMPA1P29218 277 aa20.28■□□□□ 0.84
CSNK1D-215ENST00000580784 EMP3P54852 163 aa20.28■□□□□ 0.84
CSNK1D-215ENST00000580784 ABATP80404 500 aa20.28■□□□□ 0.84
CSNK1D-215ENST00000580784 OCA2Q04671 838 aa20.28■□□□□ 0.84
CSNK1D-215ENST00000580784 VWA2Q5GFL6 755 aa20.28■□□□□ 0.84
CSNK1D-215ENST00000580784 THEMIS2Q5TEJ8 643 aa20.28■□□□□ 0.84
CSNK1D-215ENST00000580784 PLD3Q8IV08 490 aa20.28■□□□□ 0.84
CSNK1D-215ENST00000580784 PARP9Q8IXQ6 854 aa20.28■□□□□ 0.84
CSNK1D-215ENST00000580784 OR11G2Q8NGC1 345 aa20.28■□□□□ 0.84
CSNK1D-215ENST00000580784 MIEF2Q96C03 454 aa20.28■□□□□ 0.84
CSNK1D-215ENST00000580784 CRB3Q9BUF7 120 aa20.28■□□□□ 0.84
CSNK1D-215ENST00000580784 CUEDC1Q9NWM3 386 aaPredicted RBP20.28■□□□□ 0.84
CSNK1D-215ENST00000580784 UTP6Q9NYH9 597 aaKnown RBP20.28■□□□□ 0.84
CSNK1D-215ENST00000580784 MAP10Q9P2G4 905 aa20.28■□□□□ 0.84
CSNK1D-215ENST00000580784 TRMT6Q9UJA5 497 aaKnown RBP20.28■□□□□ 0.84
CSNK1D-215ENST00000580784 ADAMTS6Q9UKP5 1117 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms