RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 EMP3P54852 163 aa15.15■□□□□ 0.02
CRLF3-203ENST00000578692 TAP2Q03519 686 aa15.15■□□□□ 0.02
CRLF3-203ENST00000578692 OCA2Q04671 838 aa15.15■□□□□ 0.02
CRLF3-203ENST00000578692 PRTGQ2VWP7 1150 aa15.15■□□□□ 0.02
CRLF3-203ENST00000578692 PRR30Q53SZ7 412 aaPredicted RBP15.15■□□□□ 0.02
CRLF3-203ENST00000578692 RNASEH2BQ5TBB1 312 aaKnown RBP15.15■□□□□ 0.02
CRLF3-203ENST00000578692 PRAMEF13Q5VWM6 474 aa15.15■□□□□ 0.02
CRLF3-203ENST00000578692 ICE2Q659A1 982 aa15.15■□□□□ 0.02
CRLF3-203ENST00000578692 KIRREL2Q6UWL6 708 aa15.15■□□□□ 0.02
CRLF3-203ENST00000578692 PAQR7Q86WK9 346 aa15.15■□□□□ 0.02
CRLF3-203ENST00000578692 SPNS2Q8IVW8 549 aa15.15■□□□□ 0.02
CRLF3-203ENST00000578692 ZADH2Q8N4Q0 377 aa15.15■□□□□ 0.02
CRLF3-203ENST00000578692 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.15■□□□□ 0.02
CRLF3-203ENST00000578692 STT3BQ8TCJ2 826 aa15.15■□□□□ 0.02
CRLF3-203ENST00000578692 TM9SF4Q92544 642 aa15.15■□□□□ 0.02
CRLF3-203ENST00000578692 MIEF2Q96C03 454 aa15.15■□□□□ 0.02
CRLF3-203ENST00000578692 VPS50Q96JG6 964 aa15.15■□□□□ 0.02
CRLF3-203ENST00000578692 GPR21Q99679 349 aa15.15■□□□□ 0.02
CRLF3-203ENST00000578692 ZBTB20Q9HC78 741 aaPredicted RBP15.15■□□□□ 0.02
CRLF3-203ENST00000578692 IARS2Q9NSE4 1012 aaKnown RBP15.15■□□□□ 0.02
CRLF3-203ENST00000578692 UTP6Q9NYH9 597 aaKnown RBP15.15■□□□□ 0.02
CRLF3-203ENST00000578692 ZNF282Q9UDV7 671 aaPredicted RBP15.15■□□□□ 0.02
CRLF3-203ENST00000578692 FBXL4Q9UKA2 621 aa15.15■□□□□ 0.02
CRLF3-203ENST00000578692 SNX12Q9UMY4 172 aa15.15■□□□□ 0.02
CRLF3-203ENST00000578692 NBASA2RRP1 2371 aa15.14■□□□□ 0.01
CRLF3-203ENST00000578692 IGKV1-8A0A0C4DH67 115 aa15.14■□□□□ 0.01
CRLF3-203ENST00000578692 CCNDBP1O95273 360 aa15.14■□□□□ 0.01
CRLF3-203ENST00000578692 ZGLP1P0C6A0 271 aa15.14■□□□□ 0.01
CRLF3-203ENST00000578692 CARSP49589 748 aaKnown RBP15.14■□□□□ 0.01
CRLF3-203ENST00000578692 MPP1Q00013 466 aa15.14■□□□□ 0.01
CRLF3-203ENST00000578692 RBBP7Q16576 425 aa15.14■□□□□ 0.01
CRLF3-203ENST00000578692 TUBB8Q3ZCM7 444 aa15.14■□□□□ 0.01
CRLF3-203ENST00000578692 FHL5Q5TD97 284 aa15.14■□□□□ 0.01
CRLF3-203ENST00000578692 ZNF425Q6IV72 752 aa15.14■□□□□ 0.01
CRLF3-203ENST00000578692 KCNMB4Q86W47 210 aa15.14■□□□□ 0.01
CRLF3-203ENST00000578692 PARP9Q8IXQ6 854 aa15.14■□□□□ 0.01
CRLF3-203ENST00000578692 IQCKQ8N0W5 287 aa15.14■□□□□ 0.01
CRLF3-203ENST00000578692 CD200R1Q8TD46 325 aa15.14■□□□□ 0.01
CRLF3-203ENST00000578692 CABS1Q96KC9 395 aa15.14■□□□□ 0.01
CRLF3-203ENST00000578692 FAM167BQ9BTA0 163 aa15.14■□□□□ 0.01
CRLF3-203ENST00000578692 AARSD1Q9BTE6 412 aaKnown RBP15.14■□□□□ 0.01
CRLF3-203ENST00000578692 ABCF3Q9NUQ8 709 aa15.14■□□□□ 0.01
CRLF3-203ENST00000578692 TRMT1Q9NXH9 659 aaKnown RBP15.14■□□□□ 0.01
CRLF3-203ENST00000578692 CDC14AQ9UNH5 594 aa15.14■□□□□ 0.01
CRLF3-203ENST00000578692 NUP210LQ5VU65 1888 aa15.14■□□□□ 0.01
CRLF3-203ENST00000578692 TCP11X1B4DZS4 312 aa15.13■□□□□ 0.01
CRLF3-203ENST00000578692 SMAPO00193 183 aa15.13■□□□□ 0.01
CRLF3-203ENST00000578692 ALOX12BO75342 701 aa15.13■□□□□ 0.01
CRLF3-203ENST00000578692 PGAM1P18669 254 aa15.13■□□□□ 0.01
CRLF3-203ENST00000578692 SKIV2L2P42285 1042 aaKnown RBP15.13■□□□□ 0.01
CRLF3-203ENST00000578692 ABATP80404 500 aa15.13■□□□□ 0.01
CRLF3-203ENST00000578692 RELAQ04206 551 aa15.13■□□□□ 0.01
CRLF3-203ENST00000578692 KLC1Q07866 573 aa15.13■□□□□ 0.01
CRLF3-203ENST00000578692 PTK6Q13882 451 aa15.13■□□□□ 0.01
CRLF3-203ENST00000578692 VWA2Q5GFL6 755 aa15.13■□□□□ 0.01
CRLF3-203ENST00000578692 THEMIS2Q5TEJ8 643 aa15.13■□□□□ 0.01
CRLF3-203ENST00000578692 UGT3A1Q6NUS8 523 aa15.13■□□□□ 0.01
CRLF3-203ENST00000578692 UBE2R2Q712K3 238 aaPredicted RBP15.13■□□□□ 0.01
CRLF3-203ENST00000578692 PCGF5Q86SE9 256 aa15.13■□□□□ 0.01
CRLF3-203ENST00000578692 LRRC56Q8IYG6 542 aaPredicted RBP15.13■□□□□ 0.01
CRLF3-203ENST00000578692 CPNE9Q8IYJ1 553 aa15.13■□□□□ 0.01
CRLF3-203ENST00000578692 OR11G2Q8NGC1 345 aa15.13■□□□□ 0.01
CRLF3-203ENST00000578692 GABPB2Q8TAK5 448 aaPredicted RBP15.13■□□□□ 0.01
CRLF3-203ENST00000578692 SNRNP40Q96DI7 357 aaKnown RBP15.13■□□□□ 0.01
CRLF3-203ENST00000578692 C19orf60Q96EN9 201 aa15.13■□□□□ 0.01
CRLF3-203ENST00000578692 C10orf90Q96M02 699 aa15.13■□□□□ 0.01
CRLF3-203ENST00000578692 PSMG3-AS1Q96PY0 264 aa15.13■□□□□ 0.01
CRLF3-203ENST00000578692 OR2A5Q96R48 311 aa15.13■□□□□ 0.01
CRLF3-203ENST00000578692 CRB3Q9BUF7 120 aa15.13■□□□□ 0.01
CRLF3-203ENST00000578692 SLC29A3Q9BZD2 475 aa15.13■□□□□ 0.01
CRLF3-203ENST00000578692 ILKAPQ9H0C8 392 aaPredicted RBP15.13■□□□□ 0.01
CRLF3-203ENST00000578692 DDX47Q9H0S4 455 aaKnown RBP15.13■□□□□ 0.01
CRLF3-203ENST00000578692 GRPEL1Q9HAV7 217 aa15.13■□□□□ 0.01
CRLF3-203ENST00000578692 ASIC3Q9UHC3 531 aa15.13■□□□□ 0.01
CRLF3-203ENST00000578692 RUVBL1Q9Y265 456 aaKnown RBP15.13■□□□□ 0.01
CRLF3-203ENST00000578692 COL12A1Q99715 3063 aa15.13■□□□□ 0.01
CRLF3-203ENST00000578692 IGLV3-12A0A075B6K2 115 aa15.12■□□□□ 0.01
CRLF3-203ENST00000578692 BLACEA4D250 179 aa15.12■□□□□ 0.01
CRLF3-203ENST00000578692 EIF3FO00303 357 aaPredicted RBP15.12■□□□□ 0.01
CRLF3-203ENST00000578692 TXNDC9O14530 226 aa15.12■□□□□ 0.01
CRLF3-203ENST00000578692 DNALI1O14645 258 aaPredicted RBP15.12■□□□□ 0.01
CRLF3-203ENST00000578692 EZRP15311 586 aaKnown RBP15.12■□□□□ 0.01
CRLF3-203ENST00000578692 FBLP22087 321 aaKnown RBP15.12■□□□□ 0.01
CRLF3-203ENST00000578692 DHX9Q08211 1270 aaKnown RBP15.12■□□□□ 0.01
CRLF3-203ENST00000578692 CRYMQ14894 314 aa15.12■□□□□ 0.01
CRLF3-203ENST00000578692 HKDC1Q2TB90 917 aa15.12■□□□□ 0.01
CRLF3-203ENST00000578692 AGAP7PQ5VUJ5 663 aa15.12■□□□□ 0.01
CRLF3-203ENST00000578692 IRAK1BP1Q5VVH5 260 aa15.12■□□□□ 0.01
CRLF3-203ENST00000578692 GARNL3Q5VVW2 1013 aa15.12■□□□□ 0.01
CRLF3-203ENST00000578692 Q6ZS92 163 aa15.12■□□□□ 0.01
CRLF3-203ENST00000578692 PIWIL4Q7Z3Z4 852 aaKnown RBP15.12■□□□□ 0.01
CRLF3-203ENST00000578692 ADCK2Q7Z695 626 aa15.12■□□□□ 0.01
CRLF3-203ENST00000578692 LAPTM4BQ86VI4 370 aa15.12■□□□□ 0.01
CRLF3-203ENST00000578692 PRSS58Q8IYP2 241 aa15.12■□□□□ 0.01
CRLF3-203ENST00000578692 CISD2Q8N5K1 135 aaKnown RBP15.12■□□□□ 0.01
CRLF3-203ENST00000578692 CSNK1A1LQ8N752 337 aa15.12■□□□□ 0.01
CRLF3-203ENST00000578692 C2CD4AQ8NCU7 369 aaPredicted RBP15.12■□□□□ 0.01
CRLF3-203ENST00000578692 RERGQ96A58 199 aaPredicted RBP15.12■□□□□ 0.01
CRLF3-203ENST00000578692 MVB12AQ96EY5 273 aa15.12■□□□□ 0.01
CRLF3-203ENST00000578692 AGAP4Q96P64 663 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 152 ms