RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 UBE2IP63279 158 aaKnown RBP17.89■□□□□ 0.46
PRKCA-203ENST00000578063 HMGCS1Q01581 520 aa17.89■□□□□ 0.46
PRKCA-203ENST00000578063 GRIK2Q13002 908 aa17.89■□□□□ 0.46
PRKCA-203ENST00000578063 C1orf61Q13536 156 aa17.89■□□□□ 0.46
PRKCA-203ENST00000578063 ICE2Q659A1 982 aa17.89■□□□□ 0.46
PRKCA-203ENST00000578063 PMS2CLQ68D20 193 aa17.89■□□□□ 0.46
PRKCA-203ENST00000578063 ASRGL1Q7L266 308 aa17.89■□□□□ 0.46
PRKCA-203ENST00000578063 GKN2Q86XP6 184 aa17.89■□□□□ 0.46
PRKCA-203ENST00000578063 LAS2Q8IYD9 372 aa17.89■□□□□ 0.46
PRKCA-203ENST00000578063 MAML2Q8IZL2 1156 aaPredicted RBP17.89■□□□□ 0.46
PRKCA-203ENST00000578063 KRT78Q8N1N4 520 aa17.89■□□□□ 0.46
PRKCA-203ENST00000578063 ABHD11Q8NFV4 315 aa17.89■□□□□ 0.46
PRKCA-203ENST00000578063 OR7G3Q8NG95 312 aa17.89■□□□□ 0.46
PRKCA-203ENST00000578063 RP9Q8TA86 221 aaKnown RBP17.89■□□□□ 0.46
PRKCA-203ENST00000578063 SLC7A6OSQ96CW6 309 aaPredicted RBP17.89■□□□□ 0.46
PRKCA-203ENST00000578063 MTFMTQ96DP5 389 aaKnown RBP17.89■□□□□ 0.46
PRKCA-203ENST00000578063 BRF2Q9HAW0 419 aa17.89■□□□□ 0.46
PRKCA-203ENST00000578063 LRTM1Q9HBL6 345 aa17.89■□□□□ 0.46
PRKCA-203ENST00000578063 SLC40A1Q9NP59 571 aa17.89■□□□□ 0.46
PRKCA-203ENST00000578063 SDR39U1Q9NRG7 319 aaPredicted RBP17.89■□□□□ 0.46
PRKCA-203ENST00000578063 C1orf109Q9NX04 203 aa17.89■□□□□ 0.46
PRKCA-203ENST00000578063 NOP53Q9NZM5 478 aaKnown RBP17.89■□□□□ 0.46
PRKCA-203ENST00000578063 CPNE7Q9UBL6 633 aa17.89■□□□□ 0.46
PRKCA-203ENST00000578063 FBXO4Q9UKT5 387 aa17.89■□□□□ 0.46
PRKCA-203ENST00000578063 CCNDBP1O95273 360 aa17.89■□□□□ 0.45
PRKCA-203ENST00000578063 CSNK1EP49674 416 aaKnown RBP17.89■□□□□ 0.45
PRKCA-203ENST00000578063 CCR8P51685 355 aa17.89■□□□□ 0.45
PRKCA-203ENST00000578063 ABATP80404 500 aa17.89■□□□□ 0.45
PRKCA-203ENST00000578063 RPS6KA2Q15349 733 aa17.89■□□□□ 0.45
PRKCA-203ENST00000578063 ZFAND4Q86XD8 727 aa17.89■□□□□ 0.45
PRKCA-203ENST00000578063 PARP9Q8IXQ6 854 aa17.89■□□□□ 0.45
PRKCA-203ENST00000578063 RBM12BQ8IXT5 1001 aaKnown RBP17.89■□□□□ 0.45
PRKCA-203ENST00000578063 SDR16C5Q8N3Y7 309 aa17.89■□□□□ 0.45
PRKCA-203ENST00000578063 TMEM105Q8N8V8 129 aa17.89■□□□□ 0.45
PRKCA-203ENST00000578063 AVL9Q8NBF6 648 aa17.89■□□□□ 0.45
PRKCA-203ENST00000578063 SLC37A2Q8TED4 501 aa17.89■□□□□ 0.45
PRKCA-203ENST00000578063 BRINP2Q9C0B6 783 aa17.89■□□□□ 0.45
PRKCA-203ENST00000578063 PITHD1Q9GZP4 211 aaPredicted RBP17.89■□□□□ 0.45
PRKCA-203ENST00000578063 CAAP1Q9H8G2 361 aa17.89■□□□□ 0.45
PRKCA-203ENST00000578063 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.89■□□□□ 0.45
PRKCA-203ENST00000578063 TSC22D4Q9Y3Q8 395 aa17.89■□□□□ 0.45
PRKCA-203ENST00000578063 GPR45Q9Y5Y3 372 aa17.89■□□□□ 0.45
PRKCA-203ENST00000578063 TRBV23OR9-2A0A075B6M9 112 aa17.88■□□□□ 0.45
PRKCA-203ENST00000578063 PSMB5P28074 263 aa17.88■□□□□ 0.45
PRKCA-203ENST00000578063 DHPSP49366 369 aaPredicted RBP17.88■□□□□ 0.45
PRKCA-203ENST00000578063 DIO3P55073 304 aa17.88■□□□□ 0.45
PRKCA-203ENST00000578063 CORO7P57737 925 aa17.88■□□□□ 0.45
PRKCA-203ENST00000578063 RPL38P63173 70 aaKnown RBP17.88■□□□□ 0.45
PRKCA-203ENST00000578063 PRDX1Q06830 199 aaKnown RBP17.88■□□□□ 0.45
PRKCA-203ENST00000578063 CYLC2Q14093 348 aaPredicted RBP17.88■□□□□ 0.45
PRKCA-203ENST00000578063 PLCL1Q15111 1095 aa17.88■□□□□ 0.45
PRKCA-203ENST00000578063 PDCD4Q53EL6 469 aaKnown RBP17.88■□□□□ 0.45
PRKCA-203ENST00000578063 SLC9B2Q86UD5 537 aa17.88■□□□□ 0.45
PRKCA-203ENST00000578063 SNX32Q86XE0 403 aa17.88■□□□□ 0.45
PRKCA-203ENST00000578063 FAM129CQ86XR2 697 aa17.88■□□□□ 0.45
PRKCA-203ENST00000578063 NAGSQ8N159 534 aa17.88■□□□□ 0.45
PRKCA-203ENST00000578063 POU5F2Q8N7G0 328 aa17.88■□□□□ 0.45
PRKCA-203ENST00000578063 DTWD2Q8NBA8 298 aa17.88■□□□□ 0.45
PRKCA-203ENST00000578063 FAM46DQ8NEK8 389 aa17.88■□□□□ 0.45
PRKCA-203ENST00000578063 OR2A1Q8NGT9 310 aa17.88■□□□□ 0.45
PRKCA-203ENST00000578063 ZDHHC1Q8WTX9 485 aa17.88■□□□□ 0.45
PRKCA-203ENST00000578063 AIF1LQ9BQI0 150 aa17.88■□□□□ 0.45
PRKCA-203ENST00000578063 C1orf50Q9BV19 199 aa17.88■□□□□ 0.45
PRKCA-203ENST00000578063 SRMSQ9H3Y6 488 aa17.88■□□□□ 0.45
PRKCA-203ENST00000578063 TMEM45AQ9NWC5 275 aa17.88■□□□□ 0.45
PRKCA-203ENST00000578063 ASIC5Q9NY37 505 aa17.88■□□□□ 0.45
PRKCA-203ENST00000578063 EIF3LQ9Y262 564 aaKnown RBP17.88■□□□□ 0.45
PRKCA-203ENST00000578063 A0A1B0GTW7 788 aa17.87■□□□□ 0.45
PRKCA-203ENST00000578063 FAM221BA6H8Z2 402 aa17.87■□□□□ 0.45
PRKCA-203ENST00000578063 CFAP73A6NFT4 308 aa17.87■□□□□ 0.45
PRKCA-203ENST00000578063 PRICKLE3O43900 615 aaPredicted RBP17.87■□□□□ 0.45
PRKCA-203ENST00000578063 PCNAP12004 261 aa17.87■□□□□ 0.45
PRKCA-203ENST00000578063 GNSP15586 552 aa17.87■□□□□ 0.45
PRKCA-203ENST00000578063 GPX3P22352 226 aa17.87■□□□□ 0.45
PRKCA-203ENST00000578063 CPA2P48052 419 aa17.87■□□□□ 0.45
PRKCA-203ENST00000578063 PHEXP78562 749 aa17.87■□□□□ 0.45
PRKCA-203ENST00000578063 RFTN2Q52LD8 501 aaPredicted RBP17.87■□□□□ 0.45
PRKCA-203ENST00000578063 OR4E2Q8NGC2 313 aa17.87■□□□□ 0.45
PRKCA-203ENST00000578063 LMX1AQ8TE12 382 aa17.87■□□□□ 0.45
PRKCA-203ENST00000578063 SLC22A18Q96BI1 424 aa17.87■□□□□ 0.45
PRKCA-203ENST00000578063 CMTM7Q96FZ5 175 aa17.87■□□□□ 0.45
PRKCA-203ENST00000578063 METTL2AQ96IZ6 378 aaKnown RBP17.87■□□□□ 0.45
PRKCA-203ENST00000578063 ERVMER34-1Q9H9K5 563 aa17.87■□□□□ 0.45
PRKCA-203ENST00000578063 SUSD2Q9UGT4 822 aa17.87■□□□□ 0.45
PRKCA-203ENST00000578063 DOLKQ9UPQ8 538 aa17.87■□□□□ 0.45
PRKCA-203ENST00000578063 TMED5Q9Y3A6 229 aa17.87■□□□□ 0.45
PRKCA-203ENST00000578063 CACNA1IQ9P0X4 2223 aa17.87■□□□□ 0.45
PRKCA-203ENST00000578063 LOC100653049A0A140TA62 436 aa17.86■□□□□ 0.45
PRKCA-203ENST00000578063 FOXE1O00358 373 aaPredicted RBP17.86■□□□□ 0.45
PRKCA-203ENST00000578063 SEC22BO75396 215 aa17.86■□□□□ 0.45
PRKCA-203ENST00000578063 KRT34O76011 436 aa17.86■□□□□ 0.45
PRKCA-203ENST00000578063 CHRM5P08912 532 aaPredicted RBP17.86■□□□□ 0.45
PRKCA-203ENST00000578063 ACPPP15309 386 aa17.86■□□□□ 0.45
PRKCA-203ENST00000578063 PCSK2P16519 638 aa17.86■□□□□ 0.45
PRKCA-203ENST00000578063 REEP5Q00765 189 aa17.86■□□□□ 0.45
PRKCA-203ENST00000578063 DDX39BQ13838 428 aaKnown RBP17.86■□□□□ 0.45
PRKCA-203ENST00000578063 GPR18Q14330 331 aa17.86■□□□□ 0.45
PRKCA-203ENST00000578063 AGKQ53H12 422 aa17.86■□□□□ 0.45
PRKCA-203ENST00000578063 TMIGD1Q6UXZ0 262 aa17.86■□□□□ 0.45
PRKCA-203ENST00000578063 ZNF548Q8NEK5 533 aaPredicted RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms