RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 TMPRSS7Q7RTY8 843 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 SLC41A1Q8IVJ1 513 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 OR2T34Q8NGX1 318 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 OR2T3Q8NH03 318 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 SRMSQ9H3Y6 488 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 XKR8Q9H6D3 395 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 OSGEPQ9NPF4 335 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 CREBZFQ9NS37 354 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 METP08581 1390 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 GMDSO60547 372 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 TNFSF4P23510 183 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 PITPNAQ00169 270 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 GALEQ14376 348 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 IQCCQ4KMZ1 466 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 ARHGAP40Q5TG30 622 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 OR10H4Q8NGA5 316 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 PPCDCQ96CD2 204 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 ERMAPQ96PL5 475 aaPredicted RBP8.66□□□□□ -1.02
CDH8-203ENST00000577390 GCM1Q9NP62 436 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 ACOXLQ9NUZ1 547 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 NFAT5O94916 1531 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 TMEM265A0A087WTH1 108 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 FAM205CA6NFA0 338 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 NPPAP01160 153 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 IFNA4P05014 189 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 ETS1P14921 441 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 PGAM1P18669 254 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 SLC2A5P22732 501 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 CLCN3P51790 818 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 SLC18A2Q05940 514 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 ZNF470Q6ECI4 717 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 DHRS4L2Q6PKH6 230 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 LANCL3Q6ZV70 420 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 ARHGAP12Q8IWW6 846 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 SPATA22Q8NHS9 363 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 SOCS4Q8WXH5 440 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 GRHL1Q9NZI5 618 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 CDC14AQ9UNH5 594 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 CHD3Q12873 2000 aaKnown RBP8.66□□□□□ -1.02
CDH8-203ENST00000577390 SLC30A4O14863 429 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 LCMT2O60294 686 aaKnown RBP8.66□□□□□ -1.02
CDH8-203ENST00000577390 ZIC2O95409 532 aaPredicted RBP8.66□□□□□ -1.02
CDH8-203ENST00000577390 NR2F6P10588 404 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 HK1P19367 917 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 AOC1P19801 751 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 RALGPS1Q5JS13 557 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 IDNKQ5T6J7 187 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 IGFN1Q86VF2 1251 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 NATD1Q8N6N6 113 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 CENPNQ96H22 339 aaPredicted RBP8.66□□□□□ -1.02
CDH8-203ENST00000577390 DGAT2Q96PD7 388 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 KCNIP1Q9NZI2 227 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 NDUFAF4Q9P032 175 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 SEC16AO15027 2179 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 A8MVJ9 347 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 NKRFO15226 690 aaKnown RBP eCLIP8.66□□□□□ -1.02
CDH8-203ENST00000577390 GRM5P41594 1212 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 RBPJQ06330 500 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 SLC10A1Q14973 349 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 KCNMB4Q86W47 210 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 CCDC116Q8IYX3 515 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 FEZF2Q8TBJ5 459 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 SERTM1A2A2V5 107 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 AP1G1O43747 822 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 ACVR2AP27037 513 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 SNU13P55769 128 aaKnown RBP8.66□□□□□ -1.02
CDH8-203ENST00000577390 DEFB115Q30KQ5 88 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 LAPTM4BQ86VI4 370 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 RANBP3LQ86VV4 465 aaPredicted RBP8.66□□□□□ -1.02
CDH8-203ENST00000577390 RBM14Q96PK6 669 aaKnown RBP8.66□□□□□ -1.02
CDH8-203ENST00000577390 TARS2Q9BW92 718 aaKnown RBP8.66□□□□□ -1.02
CDH8-203ENST00000577390 BLOC1S4Q9NUP1 217 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 CBY1Q9Y3M2 126 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 PIK3C2AO00443 1686 aa8.66□□□□□ -1.02
CDH8-203ENST00000577390 DISP2A7MBM2 1401 aa8.65□□□□□ -1.02
CDH8-203ENST00000577390 NRCAMQ92823 1304 aa8.65□□□□□ -1.02
CDH8-203ENST00000577390 LOC102723532A0A0G2JNH3 316 aa8.65□□□□□ -1.02
CDH8-203ENST00000577390 PIP5K1BO14986 540 aa8.65□□□□□ -1.02
CDH8-203ENST00000577390 DLSTP36957 453 aa8.65□□□□□ -1.02
CDH8-203ENST00000577390 UBE2NP61088 152 aaKnown RBP8.65□□□□□ -1.02
CDH8-203ENST00000577390 EXOSC6Q5RKV6 272 aaKnown RBP8.65□□□□□ -1.02
CDH8-203ENST00000577390 TMEM192Q8IY95 271 aa8.65□□□□□ -1.02
CDH8-203ENST00000577390 DEFB118Q96PH6 123 aa8.65□□□□□ -1.02
CDH8-203ENST00000577390 TMEM39BQ9GZU3 492 aa8.65□□□□□ -1.02
CDH8-203ENST00000577390 SMURF2Q9HAU4 748 aa8.65□□□□□ -1.02
CDH8-203ENST00000577390 SGK2Q9HBY8 427 aa8.65□□□□□ -1.02
CDH8-203ENST00000577390 UBQLN2Q9UHD9 624 aa8.65□□□□□ -1.02
CDH8-203ENST00000577390 PCDHGB1Q9Y5G3 927 aa8.65□□□□□ -1.02
CDH8-203ENST00000577390 RIMS1Q86UR5 1692 aaKnown RBP8.65□□□□□ -1.02
CDH8-203ENST00000577390 CRXO43186 299 aaPredicted RBP8.65□□□□□ -1.02
CDH8-203ENST00000577390 RAB5BP61020 215 aa8.65□□□□□ -1.02
CDH8-203ENST00000577390 NFATC2Q13469 925 aa8.65□□□□□ -1.02
CDH8-203ENST00000577390 FRG1Q14331 258 aaKnown RBP8.65□□□□□ -1.02
CDH8-203ENST00000577390 CREB3L2Q70SY1 520 aa8.65□□□□□ -1.02
CDH8-203ENST00000577390 PXKQ7Z7A4 578 aa8.65□□□□□ -1.02
CDH8-203ENST00000577390 PRR18Q8N4B5 295 aa8.65□□□□□ -1.02
CDH8-203ENST00000577390 PHOX2BQ99453 314 aa8.65□□□□□ -1.02
CDH8-203ENST00000577390 B4GALT7Q9UBV7 327 aa8.65□□□□□ -1.02
CDH8-203ENST00000577390 TEX13DA0A0J9YY54 714 aaPredicted RBP8.65□□□□□ -1.02
CDH8-203ENST00000577390 POLR1CO15160 346 aaPredicted RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms