RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 MAPK10P53779 464 aa9.13□□□□□ -0.95
NPLOC4-219ENST00000576713 VSNL1P62760 191 aa9.13□□□□□ -0.95
NPLOC4-219ENST00000576713 DLG1Q12959 904 aa9.13□□□□□ -0.95
NPLOC4-219ENST00000576713 CACHD1Q5VU97 1274 aa9.13□□□□□ -0.95
NPLOC4-219ENST00000576713 ANKS6Q68DC2 871 aa9.13□□□□□ -0.95
NPLOC4-219ENST00000576713 FAM45BPQ6NSW5 357 aa9.13□□□□□ -0.95
NPLOC4-219ENST00000576713 ZNF449Q6P9G9 518 aa9.13□□□□□ -0.95
NPLOC4-219ENST00000576713 REC114Q7Z4M0 266 aa9.13□□□□□ -0.95
NPLOC4-219ENST00000576713 CMC1Q7Z7K0 106 aa9.13□□□□□ -0.95
NPLOC4-219ENST00000576713 OOSP2Q86WS3 158 aa9.13□□□□□ -0.95
NPLOC4-219ENST00000576713 PLXDC1Q8IUK5 500 aa9.13□□□□□ -0.95
NPLOC4-219ENST00000576713 CTAGE3PQ8IX95 158 aa9.13□□□□□ -0.95
NPLOC4-219ENST00000576713 IFT20Q8IY31 132 aa9.13□□□□□ -0.95
NPLOC4-219ENST00000576713 LRRC56Q8IYG6 542 aaPredicted RBP9.13□□□□□ -0.95
NPLOC4-219ENST00000576713 FAM45AQ8TCE6 357 aa9.13□□□□□ -0.95
NPLOC4-219ENST00000576713 USP7Q93009 1102 aa9.13□□□□□ -0.95
NPLOC4-219ENST00000576713 NXPE2Q96DL1 559 aa9.13□□□□□ -0.95
NPLOC4-219ENST00000576713 SLC41A2Q96JW4 573 aa9.13□□□□□ -0.95
NPLOC4-219ENST00000576713 GPR22Q99680 433 aa9.13□□□□□ -0.95
NPLOC4-219ENST00000576713 PITPNM3Q9BZ71 974 aa9.13□□□□□ -0.95
NPLOC4-219ENST00000576713 STRADBQ9C0K7 418 aa9.13□□□□□ -0.95
NPLOC4-219ENST00000576713 CCDC68Q9H2F9 335 aa9.13□□□□□ -0.95
NPLOC4-219ENST00000576713 ACSS3Q9H6R3 686 aa9.13□□□□□ -0.95
NPLOC4-219ENST00000576713 FAM60AQ9NP50 221 aa9.13□□□□□ -0.95
NPLOC4-219ENST00000576713 TAS2R13Q9NYV9 303 aa9.13□□□□□ -0.95
NPLOC4-219ENST00000576713 ACTR10Q9NZ32 417 aa9.13□□□□□ -0.95
NPLOC4-219ENST00000576713 RAXQ9Y2V3 346 aa9.13□□□□□ -0.95
NPLOC4-219ENST00000576713 CACNA1BQ00975 2339 aa9.13□□□□□ -0.95
NPLOC4-219ENST00000576713 BOD1L1Q8NFC6 3051 aa9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 TEX51A0A1B0GUA7 166 aa9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 PIPSLA2A3N6 862 aa9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 TLCD2A6NGC4 264 aa9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 F8W8V4 182 aa9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 MYO1CO00159 1063 aa9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 CDC7O00311 574 aa9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 HGSO14964 777 aaPredicted RBP9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 SLC16A8O95907 504 aa9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 ITGA2BP08514 1039 aa9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 CBSLP0DN79 551 aa9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 ZNF28P17035 718 aa9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 NELFEP18615 380 aaKnown RBP9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 SLC5A2P31639 672 aa9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 STX2P32856 288 aa9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 SHMT2P34897 504 aa9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 CBSP35520 551 aa9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 GP5P40197 560 aa9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 RAB28P51157 221 aa9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 SRSF6Q13247 344 aaKnown RBP9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 TRA2AQ13595 282 aaKnown RBP eCLIP9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 TGIF1Q15583 401 aa9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 ZKSCAN8Q15776 578 aaPredicted RBP9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 UAP1Q16222 522 aaPredicted RBP9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 PPP1R3AQ16821 1122 aa9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 TBC1D25Q3MII6 688 aa9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 TTLL9Q3SXZ7 439 aa9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 PRAMEF17Q5VTA0 474 aa9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 SPESP1Q6UW49 350 aa9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 SUSD1Q6UWL2 747 aa9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 SBSNQ6UWP8 590 aa9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 NEK10Q6ZWH5 1172 aa9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 UBE2R2Q712K3 238 aaPredicted RBP9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 CLEC14AQ86T13 490 aa9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 FAM129CQ86XR2 697 aa9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 AGBL5Q8NDL9 886 aa9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 OR2L8Q8NGY9 312 aa9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 ZNF480Q8WV37 535 aa9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 NKD1Q969G9 470 aa9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 UTP4Q969X6 686 aaKnown RBP9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 GRAMD1AQ96CP6 724 aa9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 TRAPPC9Q96Q05 1148 aa9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 CPNE1Q99829 537 aa9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 DPYSL5Q9BPU6 564 aa9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 FAM129AQ9BZQ8 928 aa9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 MTRF1LQ9UGC7 380 aaKnown RBP9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 POLG2Q9UHN1 485 aa9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 SLC39A10Q9ULF5 831 aa9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 CORO1CQ9ULV4 474 aaPredicted RBP9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 SH2B3Q9UQQ2 575 aa9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 PDE10AQ9Y233 779 aa9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 B3GALT1Q9Y5Z6 326 aa9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 PKD1L2Q7Z442 2459 aa9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 UNC13CQ8NB66 2214 aa9.12□□□□□ -0.95
NPLOC4-219ENST00000576713 IGKV1-8A0A0C4DH67 115 aa9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 NPEPPSL1A6NEC2 478 aa9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 FOXO6A8MYZ6 492 aa9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 C2orf74A8MZ97 194 aa9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 H3BMH7 237 aa9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 ZW10O43264 779 aa9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 RIPK2O43353 540 aa9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 SPAG6O75602 509 aa9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 SLU7O95391 586 aaKnown RBP9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 JMJD7P0C870 316 aa9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 SLC35E2BP0CK96 405 aa9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 ENO3P13929 434 aaPredicted RBP9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 TNFRSF8P28908 595 aa9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 IMPA1P29218 277 aa9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 CSTF2P33240 577 aaKnown RBP eCLIP9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 NTF4P34130 210 aa9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 SKIV2L2P42285 1042 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms