RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 PHF21BQ96EK2 531 aa13.44□□□□□ -0.26
RPAIN-217ENST00000575711 OR6C1Q96RD1 312 aa13.44□□□□□ -0.26
RPAIN-217ENST00000575711 PLCD4Q9BRC7 762 aa13.44□□□□□ -0.26
RPAIN-217ENST00000575711 CAPS2Q9BXY5 557 aa13.44□□□□□ -0.26
RPAIN-217ENST00000575711 TMBIM4Q9HC24 238 aa13.44□□□□□ -0.26
RPAIN-217ENST00000575711 CUEDC1Q9NWM3 386 aaPredicted RBP13.44□□□□□ -0.26
RPAIN-217ENST00000575711 SIDT1Q9NXL6 827 aaKnown RBP13.44□□□□□ -0.26
RPAIN-217ENST00000575711 SLC39A1Q9NY26 324 aa13.44□□□□□ -0.26
RPAIN-217ENST00000575711 GPRC5BQ9NZH0 403 aa13.44□□□□□ -0.26
RPAIN-217ENST00000575711 OPTCQ9UBM4 332 aa13.44□□□□□ -0.26
RPAIN-217ENST00000575711 MID2Q9UJV3 735 aa13.44□□□□□ -0.26
RPAIN-217ENST00000575711 ANGPTL2Q9UKU9 493 aa13.44□□□□□ -0.26
RPAIN-217ENST00000575711 ANGPTL3Q9Y5C1 460 aa13.44□□□□□ -0.26
RPAIN-217ENST00000575711 IGKV1-8A0A0C4DH67 115 aa13.43□□□□□ -0.26
RPAIN-217ENST00000575711 OR2A25A4D2G3 310 aa13.43□□□□□ -0.26
RPAIN-217ENST00000575711 STX16-NPEPL1H3BU86 382 aa13.43□□□□□ -0.26
RPAIN-217ENST00000575711 H7BY64 318 aa13.43□□□□□ -0.26
RPAIN-217ENST00000575711 K7EPI3 171 aa13.43□□□□□ -0.26
RPAIN-217ENST00000575711 STX16O14662 325 aa13.43□□□□□ -0.26
RPAIN-217ENST00000575711 PLIN3O60664 434 aa13.43□□□□□ -0.26
RPAIN-217ENST00000575711 PROCP04070 461 aa13.43□□□□□ -0.26
RPAIN-217ENST00000575711 CDH1P12830 882 aa13.43□□□□□ -0.26
RPAIN-217ENST00000575711 FOLR1P15328 257 aa13.43□□□□□ -0.26
RPAIN-217ENST00000575711 GNAZP19086 355 aa13.43□□□□□ -0.26
RPAIN-217ENST00000575711 ATP5F1P24539 256 aaPredicted RBP13.43□□□□□ -0.26
RPAIN-217ENST00000575711 RBMS1P29558 406 aaKnown RBP13.43□□□□□ -0.26
RPAIN-217ENST00000575711 SHC2P98077 582 aa13.43□□□□□ -0.26
RPAIN-217ENST00000575711 TUBB3Q13509 450 aa13.43□□□□□ -0.26
RPAIN-217ENST00000575711 RTP5Q14D33 572 aa13.43□□□□□ -0.26
RPAIN-217ENST00000575711 PCBP2Q15366 365 aaKnown RBP eCLIP13.43□□□□□ -0.26
RPAIN-217ENST00000575711 PDK4Q16654 411 aa13.43□□□□□ -0.26
RPAIN-217ENST00000575711 TMEM164Q5U3C3 297 aa13.43□□□□□ -0.26
RPAIN-217ENST00000575711 ZNF425Q6IV72 752 aa13.43□□□□□ -0.26
RPAIN-217ENST00000575711 METTL2BQ6P1Q9 378 aaKnown RBP13.43□□□□□ -0.26
RPAIN-217ENST00000575711 TMPRSS11BQ86T26 416 aa13.43□□□□□ -0.26
RPAIN-217ENST00000575711 EXOC3L1Q86VI1 746 aa13.43□□□□□ -0.26
RPAIN-217ENST00000575711 BMPERQ8N8U9 685 aa13.43□□□□□ -0.26
RPAIN-217ENST00000575711 RDH11Q8TC12 318 aa13.43□□□□□ -0.26
RPAIN-217ENST00000575711 NEIL2Q969S2 332 aa13.43□□□□□ -0.26
RPAIN-217ENST00000575711 NXPE2Q96DL1 559 aa13.43□□□□□ -0.26
RPAIN-217ENST00000575711 PKNOX2Q96KN3 472 aa13.43□□□□□ -0.26
RPAIN-217ENST00000575711 PRAP1Q96NZ9 151 aa13.43□□□□□ -0.26
RPAIN-217ENST00000575711 FAM60AQ9NP50 221 aa13.43□□□□□ -0.26
RPAIN-217ENST00000575711 FBXO8Q9NRD0 319 aa13.43□□□□□ -0.26
RPAIN-217ENST00000575711 FGF21Q9NSA1 209 aa13.43□□□□□ -0.26
RPAIN-217ENST00000575711 TMEM184CQ9NVA4 438 aa13.43□□□□□ -0.26
RPAIN-217ENST00000575711 EMCNQ9ULC0 261 aa13.43□□□□□ -0.26
RPAIN-217ENST00000575711 SH2B3Q9UQQ2 575 aa13.43□□□□□ -0.26
RPAIN-217ENST00000575711 ACTL7BQ9Y614 415 aa13.43□□□□□ -0.26
RPAIN-217ENST00000575711 AK5Q9Y6K8 562 aa13.43□□□□□ -0.26
RPAIN-217ENST00000575711 PTPRBP23467 1997 aa13.43□□□□□ -0.26
RPAIN-217ENST00000575711 MED19A0JLT2 244 aaPredicted RBP13.42□□□□□ -0.26
RPAIN-217ENST00000575711 PMS2P1A4D2B8 440 aa13.42□□□□□ -0.26
RPAIN-217ENST00000575711 TRABD2BA6NFA1 517 aa13.42□□□□□ -0.26
RPAIN-217ENST00000575711 A8MT66 165 aa13.42□□□□□ -0.26
RPAIN-217ENST00000575711 AGPSO00116 658 aa13.42□□□□□ -0.26
RPAIN-217ENST00000575711 CLGNO14967 610 aa13.42□□□□□ -0.26
RPAIN-217ENST00000575711 POLR1CO15160 346 aaPredicted RBP13.42□□□□□ -0.26
RPAIN-217ENST00000575711 TNFSF15O95150 251 aa13.42□□□□□ -0.26
RPAIN-217ENST00000575711 SIX3O95343 332 aaPredicted RBP13.42□□□□□ -0.26
RPAIN-217ENST00000575711 MSL3P1P0C860 447 aa13.42□□□□□ -0.26
RPAIN-217ENST00000575711 MYL2P10916 166 aa13.42□□□□□ -0.26
RPAIN-217ENST00000575711 EZRP15311 586 aaKnown RBP13.42□□□□□ -0.26
RPAIN-217ENST00000575711 CREB1P16220 341 aa13.42□□□□□ -0.26
RPAIN-217ENST00000575711 EEF1DP29692 281 aaKnown RBP13.42□□□□□ -0.26
RPAIN-217ENST00000575711 GRK3P35626 688 aa13.42□□□□□ -0.26
RPAIN-217ENST00000575711 ETV5P41161 510 aa13.42□□□□□ -0.26
RPAIN-217ENST00000575711 PIK3CGP48736 1102 aa13.42□□□□□ -0.26
RPAIN-217ENST00000575711 CCR8P51685 355 aa13.42□□□□□ -0.26
RPAIN-217ENST00000575711 NFKB2Q00653 900 aa13.42□□□□□ -0.26
RPAIN-217ENST00000575711 IL11RAQ14626 422 aa13.42□□□□□ -0.26
RPAIN-217ENST00000575711 GPR19Q15760 415 aa13.42□□□□□ -0.26
RPAIN-217ENST00000575711 DEFB110Q30KQ9 67 aa13.42□□□□□ -0.26
RPAIN-217ENST00000575711 DCAF12Q5T6F0 453 aa13.42□□□□□ -0.26
RPAIN-217ENST00000575711 CEACAM20Q6UY09 585 aa13.42□□□□□ -0.26
RPAIN-217ENST00000575711 ZYG11AQ6WRX3 759 aa13.42□□□□□ -0.26
RPAIN-217ENST00000575711 RNF44Q7L0R7 432 aa13.42□□□□□ -0.26
RPAIN-217ENST00000575711 BPHLQ86WA6 291 aaPredicted RBP13.42□□□□□ -0.26
RPAIN-217ENST00000575711 PAQR7Q86WK9 346 aa13.42□□□□□ -0.26
RPAIN-217ENST00000575711 PPP1R3BQ86XI6 285 aa13.42□□□□□ -0.26
RPAIN-217ENST00000575711 SLC22A9Q8IVM8 553 aa13.42□□□□□ -0.26
RPAIN-217ENST00000575711 LSMEM2Q8N112 164 aa13.42□□□□□ -0.26
RPAIN-217ENST00000575711 DNAJC22Q8N4W6 341 aa13.42□□□□□ -0.26
RPAIN-217ENST00000575711 TEX9Q8N6V9 391 aa13.42□□□□□ -0.26
RPAIN-217ENST00000575711 GOLGA6L1Q8N7Z2 621 aa13.42□□□□□ -0.26
RPAIN-217ENST00000575711 ABHD11Q8NFV4 315 aa13.42□□□□□ -0.26
RPAIN-217ENST00000575711 TCP10LQ8TDR4 215 aa13.42□□□□□ -0.26
RPAIN-217ENST00000575711 CCDC126Q96EE4 140 aa13.42□□□□□ -0.26
RPAIN-217ENST00000575711 PRR11Q96HE9 360 aaPredicted RBP13.42□□□□□ -0.26
RPAIN-217ENST00000575711 TAAR9Q96RI9 348 aa13.42□□□□□ -0.26
RPAIN-217ENST00000575711 DDA1Q9BW61 102 aa13.42□□□□□ -0.26
RPAIN-217ENST00000575711 C12orf65Q9H3J6 166 aaKnown RBP13.42□□□□□ -0.26
RPAIN-217ENST00000575711 ACBD3Q9H3P7 528 aa13.42□□□□□ -0.26
RPAIN-217ENST00000575711 PELI2Q9HAT8 420 aa13.42□□□□□ -0.26
RPAIN-217ENST00000575711 SSU72Q9NP77 194 aaKnown RBP13.42□□□□□ -0.26
RPAIN-217ENST00000575711 RARRES3Q9UL19 164 aa13.42□□□□□ -0.26
RPAIN-217ENST00000575711 PLCL2Q9UPR0 1127 aa13.42□□□□□ -0.26
RPAIN-217ENST00000575711 PLLPQ9Y342 182 aa13.42□□□□□ -0.26
RPAIN-217ENST00000575711 ASB1Q9Y576 335 aa13.42□□□□□ -0.26
RPAIN-217ENST00000575711 A0A0J9YVX5 310 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms