RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 NCF1CA8MVU1 366 aaPredicted RBP14.59□□□□□ -0.07
LITAF-217ENST00000575426 TRIM49D1C9J1S8 452 aa14.59□□□□□ -0.07
LITAF-217ENST00000575426 SRPX2O60687 465 aaPredicted RBP14.59□□□□□ -0.07
LITAF-217ENST00000575426 KLHL2O95198 593 aa14.59□□□□□ -0.07
LITAF-217ENST00000575426 ALDOAP04075 364 aaKnown RBP14.59□□□□□ -0.07
LITAF-217ENST00000575426 NCF1P14598 390 aaPredicted RBP14.59□□□□□ -0.07
LITAF-217ENST00000575426 ITPKBP27987 946 aa14.59□□□□□ -0.07
LITAF-217ENST00000575426 GABRA4P48169 554 aa14.59□□□□□ -0.07
LITAF-217ENST00000575426 ABHD18Q0P651 414 aa14.59□□□□□ -0.07
LITAF-217ENST00000575426 TGFBIQ15582 683 aa14.59□□□□□ -0.07
LITAF-217ENST00000575426 CDKL4Q5MAI5 379 aa14.59□□□□□ -0.07
LITAF-217ENST00000575426 SULT1C3Q6IMI6 304 aa14.59□□□□□ -0.07
LITAF-217ENST00000575426 ADGRD1Q6QNK2 874 aa14.59□□□□□ -0.07
LITAF-217ENST00000575426 CCDC81Q6ZN84 652 aa14.59□□□□□ -0.07
LITAF-217ENST00000575426 TIPARPQ7Z3E1 657 aaKnown RBP14.59□□□□□ -0.07
LITAF-217ENST00000575426 TTC29Q8NA56 475 aaPredicted RBP14.59□□□□□ -0.07
LITAF-217ENST00000575426 ZSCAN1Q8NBB4 408 aa14.59□□□□□ -0.07
LITAF-217ENST00000575426 KCTD4Q8WVF5 259 aa14.59□□□□□ -0.07
LITAF-217ENST00000575426 EXT2Q93063 718 aa14.59□□□□□ -0.07
LITAF-217ENST00000575426 MTBPQ96DY7 904 aa14.59□□□□□ -0.07
LITAF-217ENST00000575426 CABS1Q96KC9 395 aa14.59□□□□□ -0.07
LITAF-217ENST00000575426 ZFYVE21Q9BQ24 234 aa14.59□□□□□ -0.07
LITAF-217ENST00000575426 SGPP1Q9BX95 441 aa14.59□□□□□ -0.07
LITAF-217ENST00000575426 SPRTNQ9H040 489 aaPredicted RBP14.59□□□□□ -0.07
LITAF-217ENST00000575426 ALG9Q9H6U8 611 aa14.59□□□□□ -0.07
LITAF-217ENST00000575426 CNOT10Q9H9A5 744 aaKnown RBP14.59□□□□□ -0.07
LITAF-217ENST00000575426 TXLNGQ9NUQ3 528 aa14.59□□□□□ -0.07
LITAF-217ENST00000575426 PSMC3IPQ9P2W1 217 aaPredicted RBP14.59□□□□□ -0.07
LITAF-217ENST00000575426 FETUBQ9UGM5 382 aa14.59□□□□□ -0.07
LITAF-217ENST00000575426 FREM2Q5SZK8 3169 aa14.59□□□□□ -0.07
LITAF-217ENST00000575426 SEC16AO15027 2179 aa14.58□□□□□ -0.07
LITAF-217ENST00000575426 SYCE1LA8MT33 242 aa14.58□□□□□ -0.08
LITAF-217ENST00000575426 H7BY64 318 aa14.58□□□□□ -0.08
LITAF-217ENST00000575426 ZSCAN9O15535 394 aaPredicted RBP14.58□□□□□ -0.08
LITAF-217ENST00000575426 ZNF749O43361 778 aa14.58□□□□□ -0.08
LITAF-217ENST00000575426 TUBBP07437 444 aa14.58□□□□□ -0.08
LITAF-217ENST00000575426 GRK3P35626 688 aa14.58□□□□□ -0.08
LITAF-217ENST00000575426 ARSFP54793 590 aa14.58□□□□□ -0.08
LITAF-217ENST00000575426 TMPRSS3P57727 454 aa14.58□□□□□ -0.08
LITAF-217ENST00000575426 VSX2P58304 361 aaPredicted RBP14.58□□□□□ -0.08
LITAF-217ENST00000575426 YBX1P67809 324 aaKnown RBP14.58□□□□□ -0.08
LITAF-217ENST00000575426 TLE3Q04726 772 aa14.58□□□□□ -0.08
LITAF-217ENST00000575426 DLG1Q12959 904 aa14.58□□□□□ -0.08
LITAF-217ENST00000575426 ACAP2Q15057 778 aa14.58□□□□□ -0.08
LITAF-217ENST00000575426 OR4D1Q15615 310 aa14.58□□□□□ -0.08
LITAF-217ENST00000575426 PTCHD3Q3KNS1 767 aa14.58□□□□□ -0.08
LITAF-217ENST00000575426 ZNF425Q6IV72 752 aa14.58□□□□□ -0.08
LITAF-217ENST00000575426 FBXO42Q6P3S6 717 aa14.58□□□□□ -0.08
LITAF-217ENST00000575426 ISCA2Q86U28 154 aa14.58□□□□□ -0.08
LITAF-217ENST00000575426 PAQR7Q86WK9 346 aa14.58□□□□□ -0.08
LITAF-217ENST00000575426 ZNF655Q8N720 491 aaPredicted RBP14.58□□□□□ -0.08
LITAF-217ENST00000575426 RERGQ96A58 199 aaPredicted RBP14.58□□□□□ -0.08
LITAF-217ENST00000575426 PTERQ96BW5 349 aa14.58□□□□□ -0.08
LITAF-217ENST00000575426 RHBDF1Q96CC6 855 aa14.58□□□□□ -0.08
LITAF-217ENST00000575426 PRAP1Q96NZ9 151 aa14.58□□□□□ -0.08
LITAF-217ENST00000575426 NDC1Q9BTX1 674 aa14.58□□□□□ -0.08
LITAF-217ENST00000575426 DHRS4Q9BTZ2 278 aa14.58□□□□□ -0.08
LITAF-217ENST00000575426 GPN2Q9H9Y4 310 aaPredicted RBP14.58□□□□□ -0.08
LITAF-217ENST00000575426 PPCSQ9HAB8 311 aa14.58□□□□□ -0.08
LITAF-217ENST00000575426 IGSF5Q9NSI5 407 aa14.58□□□□□ -0.08
LITAF-217ENST00000575426 WWOXQ9NZC7 414 aa14.58□□□□□ -0.08
LITAF-217ENST00000575426 SRPK3Q9UPE1 567 aa14.58□□□□□ -0.08
LITAF-217ENST00000575426 CCDC88CQ9P219 2028 aa14.58□□□□□ -0.08
LITAF-217ENST00000575426 SUPT3HB4E1H0 165 aa14.57□□□□□ -0.08
LITAF-217ENST00000575426 HCRTR1O43613 425 aa14.57□□□□□ -0.08
LITAF-217ENST00000575426 CTSVO60911 334 aa14.57□□□□□ -0.08
LITAF-217ENST00000575426 SUPT3HO75486 399 aa14.57□□□□□ -0.08
LITAF-217ENST00000575426 WDR47O94967 919 aa14.57□□□□□ -0.08
LITAF-217ENST00000575426 EIF2S1P05198 315 aaKnown RBP14.57□□□□□ -0.08
LITAF-217ENST00000575426 COL6A2P12110 1019 aa14.57□□□□□ -0.08
LITAF-217ENST00000575426 EZRP15311 586 aaKnown RBP14.57□□□□□ -0.08
LITAF-217ENST00000575426 NPPBP16860 134 aa14.57□□□□□ -0.08
LITAF-217ENST00000575426 AGXTP21549 392 aa14.57□□□□□ -0.08
LITAF-217ENST00000575426 GMPRP36959 345 aa14.57□□□□□ -0.08
LITAF-217ENST00000575426 STAT5AP42229 794 aa14.57□□□□□ -0.08
LITAF-217ENST00000575426 GLRBP48167 497 aa14.57□□□□□ -0.08
LITAF-217ENST00000575426 IRF9Q00978 393 aa14.57□□□□□ -0.08
LITAF-217ENST00000575426 RELAQ04206 551 aa14.57□□□□□ -0.08
LITAF-217ENST00000575426 GRM7Q14831 915 aa14.57□□□□□ -0.08
LITAF-217ENST00000575426 FAM214AQ32MH5 1076 aa14.57□□□□□ -0.08
LITAF-217ENST00000575426 PRAMEF17Q5VTA0 474 aa14.57□□□□□ -0.08
LITAF-217ENST00000575426 EMBQ6PCB8 327 aa14.57□□□□□ -0.08
LITAF-217ENST00000575426 C19orf48Q6RUI8 117 aa14.57□□□□□ -0.08
LITAF-217ENST00000575426 RNF44Q7L0R7 432 aa14.57□□□□□ -0.08
LITAF-217ENST00000575426 VASH2Q86V25 355 aa14.57□□□□□ -0.08
LITAF-217ENST00000575426 THOC6Q86W42 341 aaKnown RBP14.57□□□□□ -0.08
LITAF-217ENST00000575426 TBC1D19Q8N5T2 526 aa14.57□□□□□ -0.08
LITAF-217ENST00000575426 RHEBL1Q8TAI7 183 aa14.57□□□□□ -0.08
LITAF-217ENST00000575426 MR1Q95460 341 aa14.57□□□□□ -0.08
LITAF-217ENST00000575426 ISL2Q96A47 359 aa14.57□□□□□ -0.08
LITAF-217ENST00000575426 SCYL1Q96KG9 808 aa14.57□□□□□ -0.08
LITAF-217ENST00000575426 LRFN5Q96NI6 719 aa14.57□□□□□ -0.08
LITAF-217ENST00000575426 PARD6BQ9BYG5 372 aa14.57□□□□□ -0.08
LITAF-217ENST00000575426 EPB41L4BQ9H329 900 aa14.57□□□□□ -0.08
LITAF-217ENST00000575426 LHX9Q9NQ69 397 aa14.57□□□□□ -0.08
LITAF-217ENST00000575426 CUEDC1Q9NWM3 386 aaPredicted RBP14.57□□□□□ -0.08
LITAF-217ENST00000575426 NUDT4Q9NZJ9 180 aa14.57□□□□□ -0.08
LITAF-217ENST00000575426 SLC22A14Q9Y267 594 aa14.57□□□□□ -0.08
LITAF-217ENST00000575426 KCNE2Q9Y6J6 123 aa14.57□□□□□ -0.08
LITAF-217ENST00000575426 IGKV1-8A0A0C4DH67 115 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms