RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 GPR26Q8NDV2 337 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 ISG20Q96AZ6 181 aaKnown RBP8.29□□□□□ -1.08
RPAIN-215ENST00000575112 IGSF21Q96ID5 467 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 CGREF1Q99674 301 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 NLE1Q9NVX2 485 aaPredicted RBP8.29□□□□□ -1.08
RPAIN-215ENST00000575112 RHCGQ9UBD6 479 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 B4GALT6Q9UBX8 382 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 PCTPQ9UKL6 214 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 VPS9D1Q9Y2B5 631 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 GPSM3Q9Y4H4 160 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 MAP4K5Q9Y4K4 846 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 FAM186AA6NE01 2351 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 LOC100130705A0A1B0GUX0 176 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 M0R3G1 203 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 ANXA6P08133 673 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 LRIT3Q3SXY7 679 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 LY6G5CQ5SRR4 150 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 STEAP3Q658P3 488 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 ADNP2Q6IQ32 1131 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 LIMS2Q7Z4I7 341 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 VTCN1Q7Z7D3 282 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 PTRH1Q86Y79 214 aaKnown RBP8.29□□□□□ -1.08
RPAIN-215ENST00000575112 SLC13A3Q8WWT9 602 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 CLIP3Q96DZ5 547 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 ZNF641Q96N77 438 aaPredicted RBP8.29□□□□□ -1.08
RPAIN-215ENST00000575112 IL17FQ96PD4 163 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 RIOK2Q9BVS4 552 aaKnown RBP8.29□□□□□ -1.08
RPAIN-215ENST00000575112 ASPSCR1Q9BZE9 553 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 SPG21Q9NZD8 308 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 PRKAG2Q9UGJ0 569 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 TMEFF2Q9UIK5 374 aaPredicted RBP8.29□□□□□ -1.08
RPAIN-215ENST00000575112 SLC25A13Q9UJS0 675 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 TESMINQ9Y4I5 508 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 PCDHB14Q9Y5E9 798 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 PRUNE2Q8WUY3 3088 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 FNDC1Q4ZHG4 1894 aaPredicted RBP8.29□□□□□ -1.08
RPAIN-215ENST00000575112 LOC285095A0A1B0GVY8 99 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 MT-ND2P03891 347 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 OR56A5P0C7T3 313 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 JUNBP17275 347 aaPredicted RBP8.29□□□□□ -1.08
RPAIN-215ENST00000575112 EPORP19235 508 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 CD40LGP29965 261 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 MAT2AP31153 395 aaKnown RBP8.29□□□□□ -1.08
RPAIN-215ENST00000575112 TTKP33981 857 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 PTGER3P43115 390 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 PCYT1AP49585 367 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 ERVK-8P63133 956 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 DOC2BQ14184 412 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 ZNF846Q147U1 533 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 SKIV2LQ15477 1246 aaKnown RBP8.29□□□□□ -1.08
RPAIN-215ENST00000575112 ZNF284Q2VY69 593 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 MANEALQ5VSG8 457 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 RAET1GQ6H3X3 334 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 GPR153Q6NV75 609 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 B3GNT8Q7Z7M8 397 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 FAM20CQ8IXL6 584 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 SLC47A1Q96FL8 570 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 PAWRQ96IZ0 340 aaKnown RBP8.29□□□□□ -1.08
RPAIN-215ENST00000575112 NRTNQ99748 197 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 MRPL9Q9BYD2 267 aaKnown RBP8.29□□□□□ -1.08
RPAIN-215ENST00000575112 PLSCR3Q9NRY6 295 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 AIG1Q9NVV5 245 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 SLC25A37Q9NYZ2 338 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 TMEM9Q9P0T7 183 aa8.29□□□□□ -1.08
RPAIN-215ENST00000575112 CABIN1Q9Y6J0 2220 aa8.28□□□□□ -1.08
RPAIN-215ENST00000575112 SCN4AP35499 1836 aa8.28□□□□□ -1.08
RPAIN-215ENST00000575112 A0A096LPI6 279 aa8.28□□□□□ -1.08
RPAIN-215ENST00000575112 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.28□□□□□ -1.08
RPAIN-215ENST00000575112 ILVBLA1L0T0 632 aa8.28□□□□□ -1.08
RPAIN-215ENST00000575112 TBC1D3BA6NDS4 549 aa8.28□□□□□ -1.08
RPAIN-215ENST00000575112 NME6O75414 186 aaPredicted RBP8.28□□□□□ -1.08
RPAIN-215ENST00000575112 C21orf33P30042 268 aaPredicted RBP8.28□□□□□ -1.08
RPAIN-215ENST00000575112 HOXD11P31277 338 aaPredicted RBP8.28□□□□□ -1.08
RPAIN-215ENST00000575112 SNRPD1P62314 119 aaKnown RBP8.28□□□□□ -1.08
RPAIN-215ENST00000575112 PPP2R2BQ00005 443 aa8.28□□□□□ -1.08
RPAIN-215ENST00000575112 DSC1Q08554 894 aa8.28□□□□□ -1.08
RPAIN-215ENST00000575112 SLC14A1Q13336 389 aa8.28□□□□□ -1.08
RPAIN-215ENST00000575112 CCDC85BQ15834 202 aaPredicted RBP8.28□□□□□ -1.08
RPAIN-215ENST00000575112 DGKKQ5KSL6 1271 aa8.28□□□□□ -1.08
RPAIN-215ENST00000575112 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.28□□□□□ -1.08
RPAIN-215ENST00000575112 DESI1Q6ICB0 168 aa8.28□□□□□ -1.08
RPAIN-215ENST00000575112 USP45Q70EL2 814 aa8.28□□□□□ -1.08
RPAIN-215ENST00000575112 FAM124AQ86V42 546 aa8.28□□□□□ -1.08
RPAIN-215ENST00000575112 GATAD2AQ86YP4 633 aa8.28□□□□□ -1.08
RPAIN-215ENST00000575112 CLECL1Q8IZS7 167 aa8.28□□□□□ -1.08
RPAIN-215ENST00000575112 TAGAPQ8N103 731 aa8.28□□□□□ -1.08
RPAIN-215ENST00000575112 PAPD5Q8NDF8 572 aaKnown RBP8.28□□□□□ -1.08
RPAIN-215ENST00000575112 JPH3Q8WXH2 748 aaPredicted RBP8.28□□□□□ -1.08
RPAIN-215ENST00000575112 RHBDF1Q96CC6 855 aa8.28□□□□□ -1.08
RPAIN-215ENST00000575112 DMRTB1Q96MA1 342 aa8.28□□□□□ -1.08
RPAIN-215ENST00000575112 DACH2Q96NX9 599 aa8.28□□□□□ -1.08
RPAIN-215ENST00000575112 SLIRPQ9GZT3 109 aaKnown RBP8.28□□□□□ -1.08
RPAIN-215ENST00000575112 C6orf62Q9GZU0 229 aaPredicted RBP8.28□□□□□ -1.08
RPAIN-215ENST00000575112 ASAH2Q9NR71 780 aa8.28□□□□□ -1.08
RPAIN-215ENST00000575112 C14orf119Q9NWQ9 140 aa8.28□□□□□ -1.08
RPAIN-215ENST00000575112 C5AR2Q9P296 337 aa8.28□□□□□ -1.08
RPAIN-215ENST00000575112 MBD1Q9UIS9 605 aaPredicted RBP8.28□□□□□ -1.08
RPAIN-215ENST00000575112 PCDHGA10Q9Y5H3 936 aa8.28□□□□□ -1.08
RPAIN-215ENST00000575112 WDR90Q96KV7 1748 aa8.28□□□□□ -1.08
RPAIN-215ENST00000575112 SMIM30A4D0T7 59 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms