RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 IGLV3-19P01714 112 aa27.46■■□□□ 1.99
CTDNEP1-210ENST00000574322 LAPTM5Q13571 262 aa27.46■■□□□ 1.99
CTDNEP1-210ENST00000574322 LRRC32Q14392 662 aa27.46■■□□□ 1.99
CTDNEP1-210ENST00000574322 PAGE2BQ5JRK9 111 aa27.46■■□□□ 1.99
CTDNEP1-210ENST00000574322 ZFP1Q6P2D0 407 aa27.46■■□□□ 1.99
CTDNEP1-210ENST00000574322 ARPINQ7Z6K5 226 aa27.46■■□□□ 1.99
CTDNEP1-210ENST00000574322 SLC5A11Q8WWX8 675 aa27.46■■□□□ 1.99
CTDNEP1-210ENST00000574322 PYDC1Q8WXC3 89 aa27.46■■□□□ 1.99
CTDNEP1-210ENST00000574322 IL1RL2Q9HB29 575 aa27.46■■□□□ 1.99
CTDNEP1-210ENST00000574322 CMTM6Q9NX76 183 aa27.46■■□□□ 1.99
CTDNEP1-210ENST00000574322 USP36Q9P275 1121 aaKnown RBP27.46■■□□□ 1.99
CTDNEP1-210ENST00000574322 CHRNB1P11230 501 aa27.45■■□□□ 1.99
CTDNEP1-210ENST00000574322 MSX2P35548 267 aaPredicted RBP27.45■■□□□ 1.99
CTDNEP1-210ENST00000574322 VHLP40337 213 aa27.45■■□□□ 1.99
CTDNEP1-210ENST00000574322 CLNS1AP54105 237 aaKnown RBP27.45■■□□□ 1.99
CTDNEP1-210ENST00000574322 NXPE4Q6UWF7 544 aa27.45■■□□□ 1.99
CTDNEP1-210ENST00000574322 DLEU7Q6UYE1 221 aa27.45■■□□□ 1.99
CTDNEP1-210ENST00000574322 TMPRSS11BQ86T26 416 aa27.45■■□□□ 1.99
CTDNEP1-210ENST00000574322 NRG4Q8WWG1 115 aa27.45■■□□□ 1.99
CTDNEP1-210ENST00000574322 TMEM125Q96AQ2 219 aa27.45■■□□□ 1.99
CTDNEP1-210ENST00000574322 HHIPQ96QV1 700 aa27.45■■□□□ 1.99
CTDNEP1-210ENST00000574322 LMAN1LQ9HAT1 526 aa27.45■■□□□ 1.99
CTDNEP1-210ENST00000574322 CD93Q9NPY3 652 aa27.45■■□□□ 1.99
CTDNEP1-210ENST00000574322 C15orf41Q9Y2V0 281 aa27.45■■□□□ 1.99
CTDNEP1-210ENST00000574322 H3BNX3 289 aa27.44■■□□□ 1.98
CTDNEP1-210ENST00000574322 FOXE1O00358 373 aaPredicted RBP27.44■■□□□ 1.98
CTDNEP1-210ENST00000574322 ERFP50548 548 aa27.44■■□□□ 1.98
CTDNEP1-210ENST00000574322 PRAMEF14Q5SWL7 426 aa27.44■■□□□ 1.98
CTDNEP1-210ENST00000574322 PRAMEF13Q5VWM6 474 aa27.44■■□□□ 1.98
CTDNEP1-210ENST00000574322 LRRC74BQ6ZQY2 392 aa27.44■■□□□ 1.98
CTDNEP1-210ENST00000574322 FAM156AQ8NDB6 213 aa27.44■■□□□ 1.98
CTDNEP1-210ENST00000574322 PJA1Q8NG27 643 aa27.44■■□□□ 1.98
CTDNEP1-210ENST00000574322 COL25A1Q9BXS0 654 aaPredicted RBP27.44■■□□□ 1.98
CTDNEP1-210ENST00000574322 GEMIN8Q9NWZ8 242 aaKnown RBP27.44■■□□□ 1.98
CTDNEP1-210ENST00000574322 SH2B3Q9UQQ2 575 aa27.44■■□□□ 1.98
CTDNEP1-210ENST00000574322 WDR37Q9Y2I8 494 aa27.44■■□□□ 1.98
CTDNEP1-210ENST00000574322 POM121BA6NF01 834 aa27.44■■□□□ 1.98
CTDNEP1-210ENST00000574322 TMEM221A6NGB7 291 aa27.44■■□□□ 1.98
CTDNEP1-210ENST00000574322 M0R296 226 aa27.44■■□□□ 1.98
CTDNEP1-210ENST00000574322 TNFRSF10AO00220 468 aa27.44■■□□□ 1.98
CTDNEP1-210ENST00000574322 FPGTO14772 594 aa27.44■■□□□ 1.98
CTDNEP1-210ENST00000574322 LATO43561 262 aa27.44■■□□□ 1.98
CTDNEP1-210ENST00000574322 PDGFBP01127 241 aaPredicted RBP27.44■■□□□ 1.98
CTDNEP1-210ENST00000574322 SDC1P18827 310 aa27.44■■□□□ 1.98
CTDNEP1-210ENST00000574322 CAPRIN1Q14444 709 aaKnown RBP27.44■■□□□ 1.98
CTDNEP1-210ENST00000574322 C6orf10Q5SRN2 563 aa27.44■■□□□ 1.98
CTDNEP1-210ENST00000574322 CATSPEREQ5SY80 951 aa27.44■■□□□ 1.98
CTDNEP1-210ENST00000574322 NOXRED1Q6NXP6 359 aa27.44■■□□□ 1.98
CTDNEP1-210ENST00000574322 SLC2A7Q6PXP3 512 aa27.44■■□□□ 1.98
CTDNEP1-210ENST00000574322 HID1Q8IV36 788 aa27.44■■□□□ 1.98
CTDNEP1-210ENST00000574322 KIAA2013Q8IYS2 634 aa27.44■■□□□ 1.98
CTDNEP1-210ENST00000574322 HIPK4Q8NE63 616 aa27.44■■□□□ 1.98
CTDNEP1-210ENST00000574322 BHLHE22Q8NFJ8 381 aaPredicted RBP27.44■■□□□ 1.98
CTDNEP1-210ENST00000574322 SLC13A3Q8WWT9 602 aa27.44■■□□□ 1.98
CTDNEP1-210ENST00000574322 TESCQ96BS2 214 aa27.44■■□□□ 1.98
CTDNEP1-210ENST00000574322 INSM2Q96T92 566 aaPredicted RBP27.44■■□□□ 1.98
CTDNEP1-210ENST00000574322 MTERF1Q99551 399 aaKnown RBP27.44■■□□□ 1.98
CTDNEP1-210ENST00000574322 PCBD2Q9H0N5 130 aa27.44■■□□□ 1.98
CTDNEP1-210ENST00000574322 RUVBL1Q9Y265 456 aaKnown RBP27.44■■□□□ 1.98
CTDNEP1-210ENST00000574322 TCN1P20061 433 aaPredicted RBP27.43■■□□□ 1.98
CTDNEP1-210ENST00000574322 IDSP22304 550 aa27.43■■□□□ 1.98
CTDNEP1-210ENST00000574322 HNRNPA2B1P22626 353 aaKnown RBP27.43■■□□□ 1.98
CTDNEP1-210ENST00000574322 RPL10P27635 214 aaKnown RBP27.43■■□□□ 1.98
CTDNEP1-210ENST00000574322 DGKQP52824 942 aa27.43■■□□□ 1.98
CTDNEP1-210ENST00000574322 PWP1Q13610 501 aa27.43■■□□□ 1.98
CTDNEP1-210ENST00000574322 NFATC4Q14934 902 aa27.43■■□□□ 1.98
CTDNEP1-210ENST00000574322 LPCAT2Q7L5N7 544 aa27.43■■□□□ 1.98
CTDNEP1-210ENST00000574322 DHDDSQ86SQ9 333 aa27.43■■□□□ 1.98
CTDNEP1-210ENST00000574322 RIMKLAQ8IXN7 391 aa27.43■■□□□ 1.98
CTDNEP1-210ENST00000574322 HUS1BQ8NHY5 278 aa27.43■■□□□ 1.98
CTDNEP1-210ENST00000574322 APOLD1Q96LR9 279 aa27.43■■□□□ 1.98
CTDNEP1-210ENST00000574322 IL17FQ96PD4 163 aa27.43■■□□□ 1.98
CTDNEP1-210ENST00000574322 FGF22Q9HCT0 170 aa27.43■■□□□ 1.98
CTDNEP1-210ENST00000574322 POLMQ9NP87 494 aaPredicted RBP27.43■■□□□ 1.98
CTDNEP1-210ENST00000574322 EBF1Q9UH73 591 aa27.43■■□□□ 1.98
CTDNEP1-210ENST00000574322 TDRKHQ9Y2W6 561 aaKnown RBP27.43■■□□□ 1.98
CTDNEP1-210ENST00000574322 SIT1Q9Y3P8 196 aa27.43■■□□□ 1.98
CTDNEP1-210ENST00000574322 LRRC42Q9Y546 428 aa27.43■■□□□ 1.98
CTDNEP1-210ENST00000574322 CHURC1-FNTBB4DL54 471 aa27.42■■□□□ 1.98
CTDNEP1-210ENST00000574322 PRMT3O60678 531 aa27.42■■□□□ 1.98
CTDNEP1-210ENST00000574322 APBB3O95704 486 aa27.42■■□□□ 1.98
CTDNEP1-210ENST00000574322 PGRP06401 933 aa27.42■■□□□ 1.98
CTDNEP1-210ENST00000574322 EEFSECP57772 596 aaKnown RBP27.42■■□□□ 1.98
CTDNEP1-210ENST00000574322 SESN3P58005 492 aa27.42■■□□□ 1.98
CTDNEP1-210ENST00000574322 C21orf58P58505 322 aa27.42■■□□□ 1.98
CTDNEP1-210ENST00000574322 BNIP2Q12982 314 aa27.42■■□□□ 1.98
CTDNEP1-210ENST00000574322 HIST2H2ACQ16777 129 aaPredicted RBP27.42■■□□□ 1.98
CTDNEP1-210ENST00000574322 FAM174BQ3ZCQ3 159 aa27.42■■□□□ 1.98
CTDNEP1-210ENST00000574322 HIST2H2AA3Q6FI13 130 aa27.42■■□□□ 1.98
CTDNEP1-210ENST00000574322 RNF111Q6ZNA4 994 aa27.42■■□□□ 1.98
CTDNEP1-210ENST00000574322 SYNPOQ8N3V7 929 aa27.42■■□□□ 1.98
CTDNEP1-210ENST00000574322 RNF175Q8N4F7 328 aa27.42■■□□□ 1.98
CTDNEP1-210ENST00000574322 KRTCAP2Q8N6L1 136 aa27.42■■□□□ 1.98
CTDNEP1-210ENST00000574322 DNAJB8Q8NHS0 232 aa27.42■■□□□ 1.98
CTDNEP1-210ENST00000574322 UBE2E3Q969T4 207 aa27.42■■□□□ 1.98
CTDNEP1-210ENST00000574322 BMFQ96LC9 184 aa27.42■■□□□ 1.98
CTDNEP1-210ENST00000574322 TMEM74Q96NL1 305 aa27.42■■□□□ 1.98
CTDNEP1-210ENST00000574322 SIRT5Q9NXA8 310 aa27.42■■□□□ 1.98
CTDNEP1-210ENST00000574322 SLAMF8Q9P0V8 285 aa27.42■■□□□ 1.98
CTDNEP1-210ENST00000574322 PPT2Q9UMR5 302 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms