RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 SNRPNP63162 240 aaKnown RBP16.64■□□□□ 0.25
SMG6-214ENST00000573827 RBM20Q5T481 1227 aaKnown RBP16.64■□□□□ 0.25
SMG6-214ENST00000573827 ICE2Q659A1 982 aa16.64■□□□□ 0.25
SMG6-214ENST00000573827 PPFIBP2Q8ND30 876 aa16.64■□□□□ 0.25
SMG6-214ENST00000573827 NACC2Q96BF6 587 aa16.64■□□□□ 0.25
SMG6-214ENST00000573827 OR2A5Q96R48 311 aa16.64■□□□□ 0.25
SMG6-214ENST00000573827 NDNQ99608 321 aa16.64■□□□□ 0.25
SMG6-214ENST00000573827 ZFYVE21Q9BQ24 234 aa16.64■□□□□ 0.25
SMG6-214ENST00000573827 MESP1Q9BRJ9 268 aa16.64■□□□□ 0.25
SMG6-214ENST00000573827 STOX2Q9P2F5 926 aaPredicted RBP16.64■□□□□ 0.25
SMG6-214ENST00000573827 TAC3Q9UHF0 121 aa16.64■□□□□ 0.25
SMG6-214ENST00000573827 GPN3Q9UHW5 284 aaPredicted RBP16.64■□□□□ 0.25
SMG6-214ENST00000573827 NUP210LQ5VU65 1888 aa16.63■□□□□ 0.25
SMG6-214ENST00000573827 IGLV3-12A0A075B6K2 115 aa16.63■□□□□ 0.25
SMG6-214ENST00000573827 HYKKA2RU49 373 aa16.63■□□□□ 0.25
SMG6-214ENST00000573827 A6NL46 340 aa16.63■□□□□ 0.25
SMG6-214ENST00000573827 SOCS6O14544 535 aa16.63■□□□□ 0.25
SMG6-214ENST00000573827 TTC4O95801 387 aa16.63■□□□□ 0.25
SMG6-214ENST00000573827 AHSGP02765 367 aa16.63■□□□□ 0.25
SMG6-214ENST00000573827 ATXN8OSP0DMR3 200 aa16.63■□□□□ 0.25
SMG6-214ENST00000573827 MMP11P24347 488 aa16.63■□□□□ 0.25
SMG6-214ENST00000573827 CMPK1P30085 196 aa16.63■□□□□ 0.25
SMG6-214ENST00000573827 EMP3P54852 163 aa16.63■□□□□ 0.25
SMG6-214ENST00000573827 RELAQ04206 551 aa16.63■□□□□ 0.25
SMG6-214ENST00000573827 ZXDCQ2QGD7 858 aaPredicted RBP16.63■□□□□ 0.25
SMG6-214ENST00000573827 SPANXN3Q5MJ09 141 aa16.63■□□□□ 0.25
SMG6-214ENST00000573827 STEAP4Q687X5 459 aa16.63■□□□□ 0.25
SMG6-214ENST00000573827 HIBCHQ6NVY1 386 aaPredicted RBP16.63■□□□□ 0.25
SMG6-214ENST00000573827 TRMT10BQ6PF06 316 aaKnown RBP16.63■□□□□ 0.25
SMG6-214ENST00000573827 GALNT7Q86SF2 657 aa16.63■□□□□ 0.25
SMG6-214ENST00000573827 METTL27Q8N6F8 245 aaPredicted RBP16.63■□□□□ 0.25
SMG6-214ENST00000573827 CAPZA3Q96KX2 299 aa16.63■□□□□ 0.25
SMG6-214ENST00000573827 MRPS30Q9NP92 439 aaKnown RBP16.63■□□□□ 0.25
SMG6-214ENST00000573827 GPR83Q9NYM4 423 aa16.63■□□□□ 0.25
SMG6-214ENST00000573827 ADAMTS6Q9UKP5 1117 aa16.63■□□□□ 0.25
SMG6-214ENST00000573827 ZNF451Q9Y4E5 1061 aa16.63■□□□□ 0.25
SMG6-214ENST00000573827 HS3ST3B1Q9Y662 390 aa16.63■□□□□ 0.25
SMG6-214ENST00000573827 TEX264Q9Y6I9 313 aa16.63■□□□□ 0.25
SMG6-214ENST00000573827 RPA3P35244 121 aaPredicted RBP16.62■□□□□ 0.25
SMG6-214ENST00000573827 GNG11P61952 73 aa16.62■□□□□ 0.25
SMG6-214ENST00000573827 CBLBQ13191 982 aa16.62■□□□□ 0.25
SMG6-214ENST00000573827 RAPSNQ13702 412 aa16.62■□□□□ 0.25
SMG6-214ENST00000573827 ESPL1Q14674 2120 aa16.62■□□□□ 0.25
SMG6-214ENST00000573827 NAA25Q14CX7 972 aa16.62■□□□□ 0.25
SMG6-214ENST00000573827 MORF4L2Q15014 288 aa16.62■□□□□ 0.25
SMG6-214ENST00000573827 FAM214AQ32MH5 1076 aa16.62■□□□□ 0.25
SMG6-214ENST00000573827 BBS9Q3SYG4 887 aa16.62■□□□□ 0.25
SMG6-214ENST00000573827 TEDDM1Q5T9Z0 273 aa16.62■□□□□ 0.25
SMG6-214ENST00000573827 KIRREL2Q6UWL6 708 aa16.62■□□□□ 0.25
SMG6-214ENST00000573827 KIAA0408Q6ZU52 694 aa16.62■□□□□ 0.25
SMG6-214ENST00000573827 PCGF5Q86SE9 256 aa16.62■□□□□ 0.25
SMG6-214ENST00000573827 GALNT16Q8N428 558 aa16.62■□□□□ 0.25
SMG6-214ENST00000573827 TTC29Q8NA56 475 aaPredicted RBP16.62■□□□□ 0.25
SMG6-214ENST00000573827 EEF1AKMT1Q8WVE0 214 aa16.62■□□□□ 0.25
SMG6-214ENST00000573827 CERS2Q96G23 380 aa16.62■□□□□ 0.25
SMG6-214ENST00000573827 TRIM51Q9BSJ1 452 aa16.62■□□□□ 0.25
SMG6-214ENST00000573827 NAT9Q9BTE0 207 aa16.62■□□□□ 0.25
SMG6-214ENST00000573827 CCDC68Q9H2F9 335 aa16.62■□□□□ 0.25
SMG6-214ENST00000573827 ZNF552Q9H707 407 aaPredicted RBP16.62■□□□□ 0.25
SMG6-214ENST00000573827 CUEDC1Q9NWM3 386 aaPredicted RBP16.62■□□□□ 0.25
SMG6-214ENST00000573827 ZC3H7BQ9UGR2 993 aaKnown RBP16.62■□□□□ 0.25
SMG6-214ENST00000573827 CYSRT1A8MQ03 144 aa16.61■□□□□ 0.25
SMG6-214ENST00000573827 AGPSO00116 658 aa16.61■□□□□ 0.25
SMG6-214ENST00000573827 SMAPO00193 183 aa16.61■□□□□ 0.25
SMG6-214ENST00000573827 P2RX6O15547 441 aa16.61■□□□□ 0.25
SMG6-214ENST00000573827 VPS26AO75436 327 aa16.61■□□□□ 0.25
SMG6-214ENST00000573827 SEC31AO94979 1220 aaKnown RBP16.61■□□□□ 0.25
SMG6-214ENST00000573827 ELK3P41970 407 aa16.61■□□□□ 0.25
SMG6-214ENST00000573827 PGGT1BP53609 377 aa16.61■□□□□ 0.25
SMG6-214ENST00000573827 ABATP80404 500 aa16.61■□□□□ 0.25
SMG6-214ENST00000573827 FRG1Q14331 258 aaKnown RBP16.61■□□□□ 0.25
SMG6-214ENST00000573827 MYBPC3Q14896 1274 aa16.61■□□□□ 0.25
SMG6-214ENST00000573827 HKDC1Q2TB90 917 aa16.61■□□□□ 0.25
SMG6-214ENST00000573827 VWA5B1Q5TIE3 1220 aa16.61■□□□□ 0.25
SMG6-214ENST00000573827 SLC6A19Q695T7 634 aa16.61■□□□□ 0.25
SMG6-214ENST00000573827 JMJD6Q6NYC1 403 aaPredicted RBP16.61■□□□□ 0.25
SMG6-214ENST00000573827 PAQR3Q6TCH7 311 aa16.61■□□□□ 0.25
SMG6-214ENST00000573827 IGFL3Q6UXB1 125 aa16.61■□□□□ 0.25
SMG6-214ENST00000573827 SYDE1Q6ZW31 735 aaPredicted RBP16.61■□□□□ 0.25
SMG6-214ENST00000573827 UBE2R2Q712K3 238 aaPredicted RBP16.61■□□□□ 0.25
SMG6-214ENST00000573827 KLHL7Q8IXQ5 586 aa16.61■□□□□ 0.25
SMG6-214ENST00000573827 FER1L6-AS2Q96M78 137 aa16.61■□□□□ 0.25
SMG6-214ENST00000573827 C5AR2Q9P296 337 aa16.61■□□□□ 0.25
SMG6-214ENST00000573827 SH2B3Q9UQQ2 575 aa16.61■□□□□ 0.25
SMG6-214ENST00000573827 PDE10AQ9Y233 779 aa16.61■□□□□ 0.25
SMG6-214ENST00000573827 RUVBL1Q9Y265 456 aaKnown RBP16.61■□□□□ 0.25
SMG6-214ENST00000573827 MAP4K5Q9Y4K4 846 aa16.61■□□□□ 0.25
SMG6-214ENST00000573827 SAR1BQ9Y6B6 198 aa16.61■□□□□ 0.25
SMG6-214ENST00000573827 MAU2Q9Y6X3 613 aa16.61■□□□□ 0.25
SMG6-214ENST00000573827 ICE1Q9Y2F5 2266 aa16.61■□□□□ 0.25
SMG6-214ENST00000573827 NOTCH2Q04721 2471 aa16.6■□□□□ 0.25
SMG6-214ENST00000573827 HAT1O14929 419 aa16.6■□□□□ 0.25
SMG6-214ENST00000573827 TTI1O43156 1089 aa16.6■□□□□ 0.25
SMG6-214ENST00000573827 FOXS1O43638 330 aa16.6■□□□□ 0.25
SMG6-214ENST00000573827 ZBTB14O43829 449 aa16.6■□□□□ 0.25
SMG6-214ENST00000573827 PIM1P11309 404 aaPredicted RBP16.6■□□□□ 0.25
SMG6-214ENST00000573827 EZRP15311 586 aaKnown RBP16.6■□□□□ 0.25
SMG6-214ENST00000573827 CARSP49589 748 aaKnown RBP16.6■□□□□ 0.25
SMG6-214ENST00000573827 EFNA3P52797 238 aa16.6■□□□□ 0.25
SMG6-214ENST00000573827 DR1Q01658 176 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms