RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 ACTL8Q9H568 366 aa13.24□□□□□ -0.29
HERPUD1-218ENST00000569569 GPAMQ9HCL2 828 aa13.24□□□□□ -0.29
HERPUD1-218ENST00000569569 SLC6A20Q9NP91 592 aa13.24□□□□□ -0.29
HERPUD1-218ENST00000569569 CCDC177Q9NQR7 707 aaPredicted RBP13.24□□□□□ -0.29
HERPUD1-218ENST00000569569 ARL15Q9NXU5 204 aa13.24□□□□□ -0.29
HERPUD1-218ENST00000569569 SNX7Q9UNH6 387 aa13.24□□□□□ -0.29
HERPUD1-218ENST00000569569 NOVA2Q9UNW9 492 aaKnown RBP13.24□□□□□ -0.29
HERPUD1-218ENST00000569569 SCN3AQ9NY46 2000 aa13.23□□□□□ -0.29
HERPUD1-218ENST00000569569 IGKV1-8A0A0C4DH67 115 aa13.23□□□□□ -0.29
HERPUD1-218ENST00000569569 CAPN1P07384 714 aa13.23□□□□□ -0.29
HERPUD1-218ENST00000569569 ALAS2P22557 587 aa13.23□□□□□ -0.29
HERPUD1-218ENST00000569569 HRH2P25021 359 aa13.23□□□□□ -0.29
HERPUD1-218ENST00000569569 GCGRP47871 477 aa13.23□□□□□ -0.29
HERPUD1-218ENST00000569569 VSX2P58304 361 aaPredicted RBP13.23□□□□□ -0.29
HERPUD1-218ENST00000569569 TBPL1P62380 186 aa13.23□□□□□ -0.29
HERPUD1-218ENST00000569569 DCDP81605 110 aaKnown RBP13.23□□□□□ -0.29
HERPUD1-218ENST00000569569 RELAQ04206 551 aa13.23□□□□□ -0.29
HERPUD1-218ENST00000569569 NAB1Q13506 487 aa13.23□□□□□ -0.29
HERPUD1-218ENST00000569569 ZNF460Q14592 562 aa13.23□□□□□ -0.29
HERPUD1-218ENST00000569569 USP10Q14694 798 aaKnown RBP13.23□□□□□ -0.29
HERPUD1-218ENST00000569569 GRM7Q14831 915 aa13.23□□□□□ -0.29
HERPUD1-218ENST00000569569 FAM214AQ32MH5 1076 aa13.23□□□□□ -0.29
HERPUD1-218ENST00000569569 WASHC2DQ5SRD0 308 aa13.23□□□□□ -0.29
HERPUD1-218ENST00000569569 PRAMEF13Q5VWM6 474 aa13.23□□□□□ -0.29
HERPUD1-218ENST00000569569 FRMPD2BQ6IN97 320 aa13.23□□□□□ -0.29
HERPUD1-218ENST00000569569 ZNF425Q6IV72 752 aa13.23□□□□□ -0.29
HERPUD1-218ENST00000569569 BORAQ6PGQ7 559 aa13.23□□□□□ -0.29
HERPUD1-218ENST00000569569 SBSNQ6UWP8 590 aa13.23□□□□□ -0.29
HERPUD1-218ENST00000569569 MBOAT1Q6ZNC8 495 aa13.23□□□□□ -0.29
HERPUD1-218ENST00000569569 RNF44Q7L0R7 432 aa13.23□□□□□ -0.29
HERPUD1-218ENST00000569569 SYVN1Q86TM6 617 aa13.23□□□□□ -0.29
HERPUD1-218ENST00000569569 PAQR7Q86WK9 346 aa13.23□□□□□ -0.29
HERPUD1-218ENST00000569569 RELL1Q8IUW5 271 aa13.23□□□□□ -0.29
HERPUD1-218ENST00000569569 PPM1NQ8N819 430 aa13.23□□□□□ -0.29
HERPUD1-218ENST00000569569 TTC29Q8NA56 475 aaPredicted RBP13.23□□□□□ -0.29
HERPUD1-218ENST00000569569 ATL1Q8WXF7 558 aa13.23□□□□□ -0.29
HERPUD1-218ENST00000569569 TSPAN17Q96FV3 270 aa13.23□□□□□ -0.29
HERPUD1-218ENST00000569569 GBP5Q96PP8 586 aa13.23□□□□□ -0.29
HERPUD1-218ENST00000569569 RUFY1Q96T51 708 aa13.23□□□□□ -0.29
HERPUD1-218ENST00000569569 GPR22Q99680 433 aa13.23□□□□□ -0.29
HERPUD1-218ENST00000569569 ATG10Q9H0Y0 220 aa13.23□□□□□ -0.29
HERPUD1-218ENST00000569569 TMEM184CQ9NVA4 438 aa13.23□□□□□ -0.29
HERPUD1-218ENST00000569569 DHCR7Q9UBM7 475 aaKnown RBP13.23□□□□□ -0.29
HERPUD1-218ENST00000569569 FITM1A5D6W6 292 aa13.22□□□□□ -0.29
HERPUD1-218ENST00000569569 C9J4A7 227 aa13.22□□□□□ -0.29
HERPUD1-218ENST00000569569 NRP2O60462 931 aa13.22□□□□□ -0.29
HERPUD1-218ENST00000569569 CD63P08962 238 aa13.22□□□□□ -0.29
HERPUD1-218ENST00000569569 STMN1P16949 149 aa13.22□□□□□ -0.29
HERPUD1-218ENST00000569569 PHBP35232 272 aa13.22□□□□□ -0.29
HERPUD1-218ENST00000569569 CCR10P46092 362 aa13.22□□□□□ -0.29
HERPUD1-218ENST00000569569 RPS18P62269 152 aaKnown RBP13.22□□□□□ -0.29
HERPUD1-218ENST00000569569 NAE1Q13564 534 aa13.22□□□□□ -0.29
HERPUD1-218ENST00000569569 LY6DQ14210 128 aa13.22□□□□□ -0.29
HERPUD1-218ENST00000569569 DEFB109BQ30KR1 87 aa13.22□□□□□ -0.29
HERPUD1-218ENST00000569569 C1orf189Q5VU69 101 aa13.22□□□□□ -0.29
HERPUD1-218ENST00000569569 CAPN13Q6MZZ7 669 aaPredicted RBP13.22□□□□□ -0.29
HERPUD1-218ENST00000569569 FAM198BQ6UWH4 519 aa13.22□□□□□ -0.29
HERPUD1-218ENST00000569569 LCTLQ6UWM7 567 aa13.22□□□□□ -0.29
HERPUD1-218ENST00000569569 TTLL10Q6ZVT0 673 aa13.22□□□□□ -0.29
HERPUD1-218ENST00000569569 ENDOVQ8N8Q3 282 aaKnown RBP13.22□□□□□ -0.29
HERPUD1-218ENST00000569569 ANKRD49Q8WVL7 239 aa13.22□□□□□ -0.29
HERPUD1-218ENST00000569569 FBXL8Q96CD0 374 aa13.22□□□□□ -0.29
HERPUD1-218ENST00000569569 MED8Q96G25 268 aa13.22□□□□□ -0.29
HERPUD1-218ENST00000569569 FMO2Q99518 471 aa13.22□□□□□ -0.29
HERPUD1-218ENST00000569569 DHRS4Q9BTZ2 278 aa13.22□□□□□ -0.29
HERPUD1-218ENST00000569569 SGPP1Q9BX95 441 aa13.22□□□□□ -0.29
HERPUD1-218ENST00000569569 STARD5Q9NSY2 213 aa13.22□□□□□ -0.29
HERPUD1-218ENST00000569569 CUTCQ9NTM9 273 aa13.22□□□□□ -0.29
HERPUD1-218ENST00000569569 GPN3Q9UHW5 284 aaPredicted RBP13.22□□□□□ -0.29
HERPUD1-218ENST00000569569 IKZF3Q9UKT9 509 aa13.22□□□□□ -0.29
HERPUD1-218ENST00000569569 TCFL5Q9UL49 500 aa13.22□□□□□ -0.29
HERPUD1-218ENST00000569569 POLHQ9Y253 713 aa13.22□□□□□ -0.29
HERPUD1-218ENST00000569569 SMG1Q96Q15 3661 aaKnown RBP13.22□□□□□ -0.29
HERPUD1-218ENST00000569569 LOC105369274A0A096LPK9 316 aa13.21□□□□□ -0.29
HERPUD1-218ENST00000569569 LOC102723532A0A0G2JNH3 316 aa13.21□□□□□ -0.29
HERPUD1-218ENST00000569569 A0A1B0GX78 115 aa13.21□□□□□ -0.29
HERPUD1-218ENST00000569569 HYKKA2RU49 373 aa13.21□□□□□ -0.29
HERPUD1-218ENST00000569569 CDC14CA4D256 554 aa13.21□□□□□ -0.29
HERPUD1-218ENST00000569569 H0YGG7 62 aa13.21□□□□□ -0.29
HERPUD1-218ENST00000569569 H7BY64 318 aa13.21□□□□□ -0.29
HERPUD1-218ENST00000569569 CDC7O00311 574 aa13.21□□□□□ -0.29
HERPUD1-218ENST00000569569 DSCR3O14972 297 aa13.21□□□□□ -0.29
HERPUD1-218ENST00000569569 FAM155BO75949 473 aa13.21□□□□□ -0.29
HERPUD1-218ENST00000569569 WISP3O95389 354 aaPredicted RBP13.21□□□□□ -0.29
HERPUD1-218ENST00000569569 GUCA1CO95843 209 aa13.21□□□□□ -0.29
HERPUD1-218ENST00000569569 EIF2S1P05198 315 aaKnown RBP13.21□□□□□ -0.29
HERPUD1-218ENST00000569569 FURINP09958 794 aa13.21□□□□□ -0.29
HERPUD1-218ENST00000569569 PIM1P11309 404 aaPredicted RBP13.21□□□□□ -0.29
HERPUD1-218ENST00000569569 EZRP15311 586 aaKnown RBP13.21□□□□□ -0.29
HERPUD1-218ENST00000569569 NPPBP16860 134 aa13.21□□□□□ -0.29
HERPUD1-218ENST00000569569 ARF3P61204 181 aaPredicted RBP13.21□□□□□ -0.29
HERPUD1-218ENST00000569569 NCF4Q15080 339 aa13.21□□□□□ -0.29
HERPUD1-218ENST00000569569 UGT8Q16880 541 aa13.21□□□□□ -0.29
HERPUD1-218ENST00000569569 ZXDCQ2QGD7 858 aaPredicted RBP13.21□□□□□ -0.29
HERPUD1-218ENST00000569569 NKAIN1Q4KMZ8 207 aa13.21□□□□□ -0.29
HERPUD1-218ENST00000569569 ATP1A1-AS1Q5TC04 95 aa13.21□□□□□ -0.29
HERPUD1-218ENST00000569569 MLIPQ5VWP3 458 aa13.21□□□□□ -0.29
HERPUD1-218ENST00000569569 ADCK2Q7Z695 626 aa13.21□□□□□ -0.29
HERPUD1-218ENST00000569569 ADAMTSL2Q86TH1 951 aa13.21□□□□□ -0.29
HERPUD1-218ENST00000569569 C17orf64Q86WR6 236 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms