RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 FAM120BQ96EK7 910 aaKnown RBP5.56□□□□□ -1.52
CDH13-213ENST00000569454 WDR34Q96EX3 536 aa5.56□□□□□ -1.52
CDH13-213ENST00000569454 REXO5Q96IC2 774 aaKnown RBP5.56□□□□□ -1.52
CDH13-213ENST00000569454 COQ10AQ96MF6 247 aa5.56□□□□□ -1.52
CDH13-213ENST00000569454 PPM1MQ96MI6 270 aa5.56□□□□□ -1.52
CDH13-213ENST00000569454 RNF145Q96MT1 663 aa5.56□□□□□ -1.52
CDH13-213ENST00000569454 HHIPQ96QV1 700 aa5.56□□□□□ -1.52
CDH13-213ENST00000569454 OR52E6Q96RD3 313 aa5.56□□□□□ -1.52
CDH13-213ENST00000569454 CPPED1Q9BRF8 314 aaPredicted RBP5.56□□□□□ -1.52
CDH13-213ENST00000569454 THUMPD3Q9BV44 507 aaKnown RBP5.56□□□□□ -1.52
CDH13-213ENST00000569454 ADI1Q9BV57 179 aa5.56□□□□□ -1.52
CDH13-213ENST00000569454 RIOK2Q9BVS4 552 aaKnown RBP5.56□□□□□ -1.52
CDH13-213ENST00000569454 REPIN1Q9BWE0 567 aaKnown RBP5.56□□□□□ -1.52
CDH13-213ENST00000569454 YIPF3Q9GZM5 350 aa5.56□□□□□ -1.52
CDH13-213ENST00000569454 ABCG8Q9H221 673 aa5.56□□□□□ -1.52
CDH13-213ENST00000569454 SEMA6AQ9H2E6 1030 aa5.56□□□□□ -1.52
CDH13-213ENST00000569454 DPEP2Q9H4A9 486 aa5.56□□□□□ -1.52
CDH13-213ENST00000569454 RPF2Q9H7B2 306 aaKnown RBP5.56□□□□□ -1.52
CDH13-213ENST00000569454 ZFP14Q9HCL3 533 aa5.56□□□□□ -1.52
CDH13-213ENST00000569454 C11orf16Q9NQ32 467 aa5.56□□□□□ -1.52
CDH13-213ENST00000569454 SIRT5Q9NXA8 310 aa5.56□□□□□ -1.52
CDH13-213ENST00000569454 PTTG2Q9NZH5 202 aa5.56□□□□□ -1.52
CDH13-213ENST00000569454 STOX2Q9P2F5 926 aaPredicted RBP5.56□□□□□ -1.52
CDH13-213ENST00000569454 VPS29Q9UBQ0 182 aa5.56□□□□□ -1.52
CDH13-213ENST00000569454 DNAJB9Q9UBS3 223 aa5.56□□□□□ -1.52
CDH13-213ENST00000569454 TMPRSS11EQ9UL52 423 aa5.56□□□□□ -1.52
CDH13-213ENST00000569454 SUFUQ9UMX1 484 aa5.56□□□□□ -1.52
CDH13-213ENST00000569454 OAZ3Q9UMX2 235 aa5.56□□□□□ -1.52
CDH13-213ENST00000569454 GPR34Q9UPC5 381 aa5.56□□□□□ -1.52
CDH13-213ENST00000569454 SAMD4AQ9UPU9 718 aaKnown RBP5.56□□□□□ -1.52
CDH13-213ENST00000569454 INVSQ9Y283 1065 aa5.56□□□□□ -1.52
CDH13-213ENST00000569454 TSC22D4Q9Y3Q8 395 aa5.56□□□□□ -1.52
CDH13-213ENST00000569454 HCFC2Q9Y5Z7 792 aa5.56□□□□□ -1.52
CDH13-213ENST00000569454 GMEB1Q9Y692 573 aa5.56□□□□□ -1.52
CDH13-213ENST00000569454 ZFHX2Q9C0A1 2572 aaPredicted RBP5.55□□□□□ -1.52
CDH13-213ENST00000569454 PLXNB3Q9ULL4 1909 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 LOC100996750A0A140TA64 210 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 C7orf72A4D263 438 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 FAM86C2PA6NEL3 165 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 SAC3D1A6NKF1 404 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 EIF4E1BA6NMX2 242 aaKnown RBP5.55□□□□□ -1.52
CDH13-213ENST00000569454 FADS2P1A8MWK0 482 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 H3BNH8 94 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 ZNF701M0R085 212 aaPredicted RBP5.55□□□□□ -1.52
CDH13-213ENST00000569454 FOXE1O00358 373 aaPredicted RBP5.55□□□□□ -1.52
CDH13-213ENST00000569454 CXCR6O00574 342 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 SOCS2O14508 198 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 RFXANKO14593 260 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 AREL1O15033 823 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 TSPAN6O43657 245 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 PI15O43692 258 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 SGTAO43765 313 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 DFNA5O60443 496 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 EPN2O95208 641 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 CCNDBP1O95273 360 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 BMP10O95393 424 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 ALBP02768 609 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 TFAP2AP05549 437 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 CTSLP07711 333 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 MTHFD1P11586 935 aaKnown RBP5.55□□□□□ -1.52
CDH13-213ENST00000569454 ADRB3P13945 408 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 AMD1P17707 334 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 HRH2P25021 359 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 TEAD1P28347 426 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 OXTRP30559 389 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 CAPGP40121 348 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 GSTM5P46439 218 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 ALDH3A2P51648 485 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 DGKQP52824 942 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 OR4D2P58180 307 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 MTPNP58546 118 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 PFN3P60673 137 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 MYBPC1Q00872 1141 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 TMEM115Q12893 351 aaPredicted RBP5.55□□□□□ -1.52
CDH13-213ENST00000569454 DAG1Q14118 895 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 ARHGAP19Q14CB8 494 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 HIST2H2ACQ16777 129 aaPredicted RBP5.55□□□□□ -1.52
CDH13-213ENST00000569454 LRIT3Q3SXY7 679 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 SLC36A3Q495N2 470 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 TMEM52BQ4KMG9 183 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 FNDC3BQ53EP0 1204 aaKnown RBP5.55□□□□□ -1.52
CDH13-213ENST00000569454 SGO1Q5FBB7 561 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 XKR6Q5GH73 641 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 RNF220Q5VTB9 566 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 TTC23Q5W5X9 447 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 HIST2H2AA3Q6FI13 130 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 NOXRED1Q6NXP6 359 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 MED27Q6P2C8 311 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 NEK5Q6P3R8 708 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 GALNT18Q6P9A2 607 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 TTC33Q6PID6 262 aaPredicted RBP5.55□□□□□ -1.52
CDH13-213ENST00000569454 SUSD1Q6UWL2 747 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 SERPINA13PQ6UXR4 307 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 ADAMTSL4Q6UY14 1074 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 MBOAT1Q6ZNC8 495 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 ERN2Q76MJ5 926 aaKnown RBP5.55□□□□□ -1.52
CDH13-213ENST00000569454 DET1Q7L5Y6 550 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 R3HCC1LQ7Z5L2 792 aaKnown RBP5.55□□□□□ -1.52
CDH13-213ENST00000569454 UBE2Q1Q7Z7E8 422 aa5.55□□□□□ -1.52
CDH13-213ENST00000569454 PATL1Q86TB9 770 aaKnown RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms