RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 CCDC91Q7Z6B0 441 aa13.93□□□□□ -0.18
COMMD4-225ENST00000569245 CMC1Q7Z7K0 106 aa13.93□□□□□ -0.18
COMMD4-225ENST00000569245 SLC38A9Q8NBW4 561 aa13.93□□□□□ -0.18
COMMD4-225ENST00000569245 FLVCR1-AS1Q8TAF5 88 aa13.93□□□□□ -0.18
COMMD4-225ENST00000569245 SMC6Q96SB8 1091 aa13.93□□□□□ -0.18
COMMD4-225ENST00000569245 OLFM1Q99784 485 aa13.93□□□□□ -0.18
COMMD4-225ENST00000569245 GPR87Q9BY21 358 aa13.93□□□□□ -0.18
COMMD4-225ENST00000569245 TWSG1Q9GZX9 223 aa13.93□□□□□ -0.18
COMMD4-225ENST00000569245 CAB39LQ9H9S4 337 aa13.93□□□□□ -0.18
COMMD4-225ENST00000569245 INTS7Q9NVH2 962 aaKnown RBP13.93□□□□□ -0.18
COMMD4-225ENST00000569245 MKS1Q9NXB0 559 aa13.93□□□□□ -0.18
COMMD4-225ENST00000569245 TAS2R13Q9NYV9 303 aa13.93□□□□□ -0.18
COMMD4-225ENST00000569245 KLHL20Q9Y2M5 609 aa13.93□□□□□ -0.18
COMMD4-225ENST00000569245 MED16Q9Y2X0 877 aa13.93□□□□□ -0.18
COMMD4-225ENST00000569245 A0A096LPK6 155 aa13.92□□□□□ -0.18
COMMD4-225ENST00000569245 CDC14CA4D256 554 aa13.92□□□□□ -0.18
COMMD4-225ENST00000569245 KRT87PA6NCN2 255 aa13.92□□□□□ -0.18
COMMD4-225ENST00000569245 ZNF749O43361 778 aa13.92□□□□□ -0.18
COMMD4-225ENST00000569245 VPS26AO75436 327 aa13.92□□□□□ -0.18
COMMD4-225ENST00000569245 CREG1O75629 220 aa13.92□□□□□ -0.18
COMMD4-225ENST00000569245 WISP3O95389 354 aaPredicted RBP13.92□□□□□ -0.18
COMMD4-225ENST00000569245 C2P06681 752 aa13.92□□□□□ -0.18
COMMD4-225ENST00000569245 HBQ1P09105 142 aa13.92□□□□□ -0.18
COMMD4-225ENST00000569245 ATXN8OSP0DMR3 200 aa13.92□□□□□ -0.18
COMMD4-225ENST00000569245 CREB1P16220 341 aa13.92□□□□□ -0.18
COMMD4-225ENST00000569245 OAS2P29728 719 aaKnown RBP13.92□□□□□ -0.18
COMMD4-225ENST00000569245 SKIV2L2P42285 1042 aaKnown RBP13.92□□□□□ -0.18
COMMD4-225ENST00000569245 CLCN7P51798 805 aa13.92□□□□□ -0.18
COMMD4-225ENST00000569245 SLC18A1P54219 525 aa13.92□□□□□ -0.18
COMMD4-225ENST00000569245 CDKN2DP55273 166 aa13.92□□□□□ -0.18
COMMD4-225ENST00000569245 CCSMST1Q4G0I0 132 aa13.92□□□□□ -0.18
COMMD4-225ENST00000569245 LCA5Q86VQ0 697 aa13.92□□□□□ -0.18
COMMD4-225ENST00000569245 CEP97Q8IW35 865 aa13.92□□□□□ -0.18
COMMD4-225ENST00000569245 C4orf33Q8N1A6 199 aa13.92□□□□□ -0.18
COMMD4-225ENST00000569245 BANPQ8N9N5 519 aa13.92□□□□□ -0.18
COMMD4-225ENST00000569245 INPP5DQ92835 1189 aa13.92□□□□□ -0.18
COMMD4-225ENST00000569245 MENTQ9BUN1 341 aa13.92□□□□□ -0.18
COMMD4-225ENST00000569245 SPRTNQ9H040 489 aaPredicted RBP13.92□□□□□ -0.18
COMMD4-225ENST00000569245 CHST8Q9H2A9 424 aa13.92□□□□□ -0.18
COMMD4-225ENST00000569245 ACTL8Q9H568 366 aa13.92□□□□□ -0.18
COMMD4-225ENST00000569245 KLHL42Q9P2K6 505 aa13.92□□□□□ -0.18
COMMD4-225ENST00000569245 PCDHGA6Q9Y5G7 932 aa13.92□□□□□ -0.18
COMMD4-225ENST00000569245 BOD1L1Q8NFC6 3051 aa13.91□□□□□ -0.18
COMMD4-225ENST00000569245 A0A087X1B8 175 aa13.91□□□□□ -0.18
COMMD4-225ENST00000569245 GOLGA8RI6L899 631 aa13.91□□□□□ -0.18
COMMD4-225ENST00000569245 TERTO14746 1132 aaKnown RBP13.91□□□□□ -0.18
COMMD4-225ENST00000569245 PRPF4O43172 522 aaKnown RBP eCLIP13.91□□□□□ -0.18
COMMD4-225ENST00000569245 TYROBPO43914 113 aa13.91□□□□□ -0.18
COMMD4-225ENST00000569245 MATN4O95460 622 aa13.91□□□□□ -0.18
COMMD4-225ENST00000569245 CATP04040 527 aaKnown RBP13.91□□□□□ -0.18
COMMD4-225ENST00000569245 SLC35E2BP0CK96 405 aa13.91□□□□□ -0.18
COMMD4-225ENST00000569245 COL6A2P12110 1019 aa13.91□□□□□ -0.18
COMMD4-225ENST00000569245 MAGP20916 626 aa13.91□□□□□ -0.18
COMMD4-225ENST00000569245 AGXTP21549 392 aa13.91□□□□□ -0.18
COMMD4-225ENST00000569245 SAT1P21673 171 aa13.91□□□□□ -0.18
COMMD4-225ENST00000569245 PTPN4P29074 926 aa13.91□□□□□ -0.18
COMMD4-225ENST00000569245 CRHR1P34998 444 aa13.91□□□□□ -0.18
COMMD4-225ENST00000569245 SLC26A3P40879 764 aa13.91□□□□□ -0.18
COMMD4-225ENST00000569245 POLE2P56282 527 aa13.91□□□□□ -0.18
COMMD4-225ENST00000569245 PPP2R2AP63151 447 aa13.91□□□□□ -0.18
COMMD4-225ENST00000569245 NFATC3Q12968 1075 aa13.91□□□□□ -0.18
COMMD4-225ENST00000569245 TSTA3Q13630 321 aaPredicted RBP13.91□□□□□ -0.18
COMMD4-225ENST00000569245 GBX1Q14549 363 aa13.91□□□□□ -0.18
COMMD4-225ENST00000569245 CRTC2Q53ET0 693 aaPredicted RBP13.91□□□□□ -0.18
COMMD4-225ENST00000569245 UGT3A1Q6NUS8 523 aa13.91□□□□□ -0.18
COMMD4-225ENST00000569245 ZNF605Q86T29 641 aa13.91□□□□□ -0.18
COMMD4-225ENST00000569245 SYTL1Q8IYJ3 562 aa13.91□□□□□ -0.18
COMMD4-225ENST00000569245 DSELQ8IZU8 1212 aa13.91□□□□□ -0.18
COMMD4-225ENST00000569245 APOBEC4Q8WW27 367 aaKnown RBP13.91□□□□□ -0.18
COMMD4-225ENST00000569245 APOPT1Q96IL0 206 aa13.91□□□□□ -0.18
COMMD4-225ENST00000569245 LRFN5Q96NI6 719 aa13.91□□□□□ -0.18
COMMD4-225ENST00000569245 GPR21Q99679 349 aa13.91□□□□□ -0.18
COMMD4-225ENST00000569245 SLC30A3Q99726 388 aa13.91□□□□□ -0.18
COMMD4-225ENST00000569245 CHRNA10Q9GZZ6 450 aa13.91□□□□□ -0.18
COMMD4-225ENST00000569245 PCMTD2Q9NV79 361 aa13.91□□□□□ -0.18
COMMD4-225ENST00000569245 TLK1Q9UKI8 766 aa13.91□□□□□ -0.18
COMMD4-225ENST00000569245 PLCL2Q9UPR0 1127 aa13.91□□□□□ -0.18
COMMD4-225ENST00000569245 FARSAQ9Y285 508 aaKnown RBP13.91□□□□□ -0.18
COMMD4-225ENST00000569245 ACOT9Q9Y305 439 aa13.91□□□□□ -0.18
COMMD4-225ENST00000569245 AP1M2Q9Y6Q5 423 aa13.91□□□□□ -0.18
COMMD4-225ENST00000569245 CFAP46Q8IYW2 2715 aa13.9□□□□□ -0.18
COMMD4-225ENST00000569245 ARHGEF33A8MVX0 844 aa13.9□□□□□ -0.18
COMMD4-225ENST00000569245 COPEO14579 308 aa13.9□□□□□ -0.18
COMMD4-225ENST00000569245 PHGDHO43175 533 aaKnown RBP13.9□□□□□ -0.18
COMMD4-225ENST00000569245 HCRTR1O43613 425 aa13.9□□□□□ -0.18
COMMD4-225ENST00000569245 GSTA1P08263 222 aa13.9□□□□□ -0.18
COMMD4-225ENST00000569245 NR1D1P20393 614 aa13.9□□□□□ -0.18
COMMD4-225ENST00000569245 GRIA3P42263 894 aa13.9□□□□□ -0.18
COMMD4-225ENST00000569245 CCT5P48643 541 aa13.9□□□□□ -0.18
COMMD4-225ENST00000569245 RPS18P62269 152 aaKnown RBP13.9□□□□□ -0.18
COMMD4-225ENST00000569245 KCNAB2Q13303 367 aa13.9□□□□□ -0.18
COMMD4-225ENST00000569245 PTCHD3Q3KNS1 767 aa13.9□□□□□ -0.18
COMMD4-225ENST00000569245 C1orf189Q5VU69 101 aa13.9□□□□□ -0.18
COMMD4-225ENST00000569245 TLDC1Q6P9B6 456 aa13.9□□□□□ -0.18
COMMD4-225ENST00000569245 FIGLAQ6QHK4 219 aa13.9□□□□□ -0.18
COMMD4-225ENST00000569245 NEK10Q6ZWH5 1172 aa13.9□□□□□ -0.18
COMMD4-225ENST00000569245 RAPH1Q70E73 1250 aa13.9□□□□□ -0.18
COMMD4-225ENST00000569245 MCATQ8IVS2 390 aaKnown RBP13.9□□□□□ -0.18
COMMD4-225ENST00000569245 DNAJC22Q8N4W6 341 aa13.9□□□□□ -0.18
COMMD4-225ENST00000569245 ZNF655Q8N720 491 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms