RNA–Protein interactions for RNA: ENST00000568548.5

VAC14-210, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,945 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-210ENST00000568548 WDR12Q9GZL7 423 aaKnown RBP16.63■□□□□ 0.25
VAC14-210ENST00000568548 KRT84Q9NSB2 600 aa16.63■□□□□ 0.25
VAC14-210ENST00000568548 MARCH5Q9NX47 278 aa16.63■□□□□ 0.25
VAC14-210ENST00000568548 WDR37Q9Y2I8 494 aa16.63■□□□□ 0.25
VAC14-210ENST00000568548 SNX8Q9Y5X2 465 aa16.63■□□□□ 0.25
VAC14-210ENST00000568548 SPEGQ15772 3267 aa16.63■□□□□ 0.25
VAC14-210ENST00000568548 COL4A4P53420 1690 aaPredicted RBP16.63■□□□□ 0.25
VAC14-210ENST00000568548 EFCAB9A8MZ26 197 aa16.63■□□□□ 0.25
VAC14-210ENST00000568548 CLDN9O95484 217 aa16.63■□□□□ 0.25
VAC14-210ENST00000568548 RPP38P78345 283 aaKnown RBP16.63■□□□□ 0.25
VAC14-210ENST00000568548 SMAD3P84022 425 aaKnown RBP16.63■□□□□ 0.25
VAC14-210ENST00000568548 RING1Q06587 406 aa16.63■□□□□ 0.25
VAC14-210ENST00000568548 GPR17Q13304 367 aa16.63■□□□□ 0.25
VAC14-210ENST00000568548 SF3B4Q15427 424 aaKnown RBP eCLIP16.63■□□□□ 0.25
VAC14-210ENST00000568548 ALG1LQ6GMV1 187 aa16.63■□□□□ 0.25
VAC14-210ENST00000568548 OR2T5Q6IEZ7 315 aa16.63■□□□□ 0.25
VAC14-210ENST00000568548 HS6ST3Q8IZP7 471 aa16.63■□□□□ 0.25
VAC14-210ENST00000568548 SVOPLQ8N434 492 aa16.63■□□□□ 0.25
VAC14-210ENST00000568548 GPR26Q8NDV2 337 aa16.63■□□□□ 0.25
VAC14-210ENST00000568548 OR2T29Q8NH02 315 aa16.63■□□□□ 0.25
VAC14-210ENST00000568548 HSH2DQ96JZ2 352 aa16.63■□□□□ 0.25
VAC14-210ENST00000568548 VWA8A3KMH1 1905 aa16.62■□□□□ 0.25
VAC14-210ENST00000568548 CLIC1O00299 241 aa16.62■□□□□ 0.25
VAC14-210ENST00000568548 SYN3O14994 580 aa16.62■□□□□ 0.25
VAC14-210ENST00000568548 ITIH1P19827 911 aa16.62■□□□□ 0.25
VAC14-210ENST00000568548 DGKAP23743 735 aa16.62■□□□□ 0.25
VAC14-210ENST00000568548 HOXA9P31269 272 aa16.62■□□□□ 0.25
VAC14-210ENST00000568548 CLCN4P51793 760 aa16.62■□□□□ 0.25
VAC14-210ENST00000568548 ADGRF1Q5T601 910 aa16.62■□□□□ 0.25
VAC14-210ENST00000568548 NEK5Q6P3R8 708 aa16.62■□□□□ 0.25
VAC14-210ENST00000568548 TMEM132CQ8N3T6 1108 aa16.62■□□□□ 0.25
VAC14-210ENST00000568548 FBXO22Q8NEZ5 403 aa16.62■□□□□ 0.25
VAC14-210ENST00000568548 DNASE1L2Q92874 299 aa16.62■□□□□ 0.25
VAC14-210ENST00000568548 CORO1BQ9BR76 489 aa16.62■□□□□ 0.25
VAC14-210ENST00000568548 IL37Q9NZH6 218 aa16.62■□□□□ 0.25
VAC14-210ENST00000568548 CHD7Q9P2D1 2997 aa16.62■□□□□ 0.25
VAC14-210ENST00000568548 RAPGEFL1Q9UHV5 662 aa16.62■□□□□ 0.25
VAC14-210ENST00000568548 FAM32AQ9Y421 112 aaKnown RBP16.62■□□□□ 0.25
VAC14-210ENST00000568548 GLYATL1P3A0A0U1RQE8 302 aa16.62■□□□□ 0.25
VAC14-210ENST00000568548 A0A1B0GVM2 712 aa16.62■□□□□ 0.25
VAC14-210ENST00000568548 ILVBLA1L0T0 632 aa16.62■□□□□ 0.25
VAC14-210ENST00000568548 FPGTO14772 594 aa16.62■□□□□ 0.25
VAC14-210ENST00000568548 RGS10O43665 173 aa16.62■□□□□ 0.25
VAC14-210ENST00000568548 CCR7P32248 378 aa16.62■□□□□ 0.25
VAC14-210ENST00000568548 ARHGDIAP52565 204 aa16.62■□□□□ 0.25
VAC14-210ENST00000568548 SLC35A2P78381 396 aa16.62■□□□□ 0.25
VAC14-210ENST00000568548 SPATS1Q496A3 300 aa16.62■□□□□ 0.25
VAC14-210ENST00000568548 MFSD4AQ8N468 514 aa16.62■□□□□ 0.25
VAC14-210ENST00000568548 PIH1D2Q8WWB5 315 aa16.62■□□□□ 0.25
VAC14-210ENST00000568548 SH3KBP1Q96B97 665 aa16.62■□□□□ 0.25
VAC14-210ENST00000568548 ZNF641Q96N77 438 aaPredicted RBP16.62■□□□□ 0.25
VAC14-210ENST00000568548 CCDC115Q96NT0 180 aa16.62■□□□□ 0.25
VAC14-210ENST00000568548 CASD1Q96PB1 797 aa16.62■□□□□ 0.25
VAC14-210ENST00000568548 THG1LQ9NWX6 298 aaKnown RBP16.62■□□□□ 0.25
VAC14-210ENST00000568548 LRFN2Q9ULH4 789 aa16.62■□□□□ 0.25
VAC14-210ENST00000568548 OARD1Q9Y530 152 aa16.62■□□□□ 0.25
VAC14-210ENST00000568548 SLC28A1O00337 649 aa16.61■□□□□ 0.25
VAC14-210ENST00000568548 FKTNO75072 461 aa16.61■□□□□ 0.25
VAC14-210ENST00000568548 HPRP00739 348 aa16.61■□□□□ 0.25
VAC14-210ENST00000568548 SPNP16150 400 aa16.61■□□□□ 0.25
VAC14-210ENST00000568548 RPS3AP61247 264 aaKnown RBP16.61■□□□□ 0.25
VAC14-210ENST00000568548 TXNDC8Q6A555 127 aa16.61■□□□□ 0.25
VAC14-210ENST00000568548 PLEKHG7Q6ZR37 379 aa16.61■□□□□ 0.25
VAC14-210ENST00000568548 UBE2R2Q712K3 238 aaPredicted RBP16.61■□□□□ 0.25
VAC14-210ENST00000568548 ASIC4Q96FT7 647 aa16.61■□□□□ 0.25
VAC14-210ENST00000568548 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.61■□□□□ 0.253e-6■■■■□ 19.8
VAC14-210ENST00000568548 DCSTAMPQ9H295 470 aa16.61■□□□□ 0.25
VAC14-210ENST00000568548 TRIT1Q9H3H1 467 aaKnown RBP16.61■□□□□ 0.25
VAC14-210ENST00000568548 RERGLQ9H628 205 aa16.61■□□□□ 0.25
VAC14-210ENST00000568548 PALMDQ9NP74 551 aa16.61■□□□□ 0.25
VAC14-210ENST00000568548 ACOT13Q9NPJ3 140 aa16.61■□□□□ 0.25
VAC14-210ENST00000568548 RLIMQ9NVW2 624 aa16.61■□□□□ 0.25
VAC14-210ENST00000568548 TPRKBQ9Y3C4 175 aa16.61■□□□□ 0.25
VAC14-210ENST00000568548 MYO15AQ9UKN7 3530 aa16.61■□□□□ 0.25
VAC14-210ENST00000568548 NPIPB15A6NHN6 443 aaPredicted RBP16.61■□□□□ 0.25
VAC14-210ENST00000568548 A8MV72 311 aaPredicted RBP16.61■□□□□ 0.25
VAC14-210ENST00000568548 LAMP1P11279 417 aa16.61■□□□□ 0.25
VAC14-210ENST00000568548 PABPC1P11940 636 aaKnown RBP16.61■□□□□ 0.25
VAC14-210ENST00000568548 GJA1P17302 382 aa16.61■□□□□ 0.25
VAC14-210ENST00000568548 TCEA1P23193 301 aaKnown RBP16.61■□□□□ 0.25
VAC14-210ENST00000568548 PTPN6P29350 595 aa16.61■□□□□ 0.25
VAC14-210ENST00000568548 CA8P35219 290 aa16.61■□□□□ 0.25
VAC14-210ENST00000568548 CTSOP43234 321 aaPredicted RBP16.61■□□□□ 0.25
VAC14-210ENST00000568548 SERPINB10P48595 397 aa16.61■□□□□ 0.25
VAC14-210ENST00000568548 TCTN1Q2MV58 587 aa16.61■□□□□ 0.25
VAC14-210ENST00000568548 ATP13A5Q4VNC0 1218 aa16.61■□□□□ 0.25
VAC14-210ENST00000568548 CCDC92Q53HC0 331 aaPredicted RBP16.61■□□□□ 0.25
VAC14-210ENST00000568548 HIPK1Q86Z02 1210 aa16.61■□□□□ 0.25
VAC14-210ENST00000568548 RBFAQ8N0V3 343 aa16.61■□□□□ 0.25
VAC14-210ENST00000568548 ARL14EPQ8N8R7 260 aaPredicted RBP16.61■□□□□ 0.25
VAC14-210ENST00000568548 SPPL2AQ8TCT8 520 aa16.61■□□□□ 0.25
VAC14-210ENST00000568548 UTP15Q8TED0 518 aaKnown RBP16.61■□□□□ 0.25
VAC14-210ENST00000568548 SCHIP1Q9P0W5 487 aaPredicted RBP16.61■□□□□ 0.25
VAC14-210ENST00000568548 TBKBP1A7MCY6 615 aa16.6■□□□□ 0.25
VAC14-210ENST00000568548 SAP18O00422 153 aaKnown RBP16.6■□□□□ 0.25
VAC14-210ENST00000568548 CYP7B1O75881 506 aa16.6■□□□□ 0.25
VAC14-210ENST00000568548 ITGALP20701 1170 aa16.6■□□□□ 0.25
VAC14-210ENST00000568548 GRK5P34947 590 aa16.6■□□□□ 0.25
VAC14-210ENST00000568548 MAGEA11P43364 429 aa16.6■□□□□ 0.25
VAC14-210ENST00000568548 VEGFBP49765 207 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms