RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 PPT2Q9UMR5 302 aa15.23■□□□□ 0.03
COMMD4-215ENST00000566843 DLGAP4Q9Y2H0 992 aa15.23■□□□□ 0.03
COMMD4-215ENST00000566843 TRPV2Q9Y5S1 764 aa15.23■□□□□ 0.03
COMMD4-215ENST00000566843 A0A0D9SEW6 157 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 GOLGA8CPA6NN73 597 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 LOC730098B7Z3J9 87 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 TLL1O43897 1013 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 SSX4O60224 188 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 KCNK5O95279 499 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 TBX18O95935 607 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 POMCP01189 267 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 OR4Q2P0C623 313 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 PCSK2P16519 638 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 CTGFP29279 349 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 NOGQ13253 232 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 GPR50Q13585 617 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 CDK10Q15131 360 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 C5orf22Q49AR2 442 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 SGO1Q5FBB7 561 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 SPANXN2Q5MJ10 180 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 TLK2Q86UE8 772 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 ANKRD46Q86W74 232 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 ZSWIM9Q86XI8 627 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 SIMC1Q8NDZ2 872 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 SETD6Q8TBK2 473 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 HSH2DQ96JZ2 352 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 COL21A1Q96P44 957 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 CENPOQ9BU64 300 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 CEP44Q9C0F1 390 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 RNF167Q9H6Y7 350 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 TBC1D14Q9P2M4 693 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 SPASTQ9UBP0 616 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 UBA2Q9UBT2 640 aaPredicted RBP15.22■□□□□ 0.03
COMMD4-215ENST00000566843 SNX6Q9UNH7 406 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 A0A0U1RQS6 177 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 H3BQ06 376 aaPredicted RBP15.22■□□□□ 0.03
COMMD4-215ENST00000566843 GUCA1CO95843 209 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 B3GALT4O96024 378 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 VIPP01282 170 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 F11P03951 625 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 ADORA3P0DMS8 318 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 TACR2P21452 398 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 GDF5P43026 501 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 GPR15P49685 360 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 RGS6P49758 472 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 CHRNEQ04844 493 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 SLC39A12Q504Y0 691 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 SOWAHCQ53LP3 525 aaPredicted RBP15.22■□□□□ 0.03
COMMD4-215ENST00000566843 INO80DQ53TQ3 878 aaPredicted RBP15.22■□□□□ 0.03
COMMD4-215ENST00000566843 MORN1Q5T089 497 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 ZCCHC8Q6NZY4 707 aaKnown RBP15.22■□□□□ 0.03
COMMD4-215ENST00000566843 C19orf48Q6RUI8 117 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 GPR155Q7Z3F1 870 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 OR7G1Q8NGA0 311 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 CRELD1Q96HD1 420 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 ST6GAL2Q96JF0 529 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 ACPTQ9BZG2 426 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 MARCH7Q9H992 704 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 BPIFA1Q9NP55 256 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 CREBZFQ9NS37 354 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 TBC1D24Q9ULP9 559 aa15.22■□□□□ 0.03
COMMD4-215ENST00000566843 A0A075B6Q4 140 aa15.21■□□□□ 0.03
COMMD4-215ENST00000566843 LOC100506127A0A0U1RQW1 187 aa15.21■□□□□ 0.03
COMMD4-215ENST00000566843 RFXANKO14593 260 aa15.21■□□□□ 0.03
COMMD4-215ENST00000566843 ITGB1P05556 798 aa15.21■□□□□ 0.03
COMMD4-215ENST00000566843 CACNG1Q06432 222 aa15.21■□□□□ 0.03
COMMD4-215ENST00000566843 TUSC3Q13454 348 aa15.21■□□□□ 0.03
COMMD4-215ENST00000566843 STARD3Q14849 445 aa15.21■□□□□ 0.03
COMMD4-215ENST00000566843 ARMCX4Q5H9R4 360 aa15.21■□□□□ 0.03
COMMD4-215ENST00000566843 PRAMEF19Q5SWL8 479 aa15.21■□□□□ 0.03
COMMD4-215ENST00000566843 PTOV1Q86YD1 416 aa15.21■□□□□ 0.03
COMMD4-215ENST00000566843 KLHDC9Q8NEP7 349 aa15.21■□□□□ 0.03
COMMD4-215ENST00000566843 OR7D4Q8NG98 312 aa15.21■□□□□ 0.03
COMMD4-215ENST00000566843 C7orf34Q96L11 122 aa15.21■□□□□ 0.03
COMMD4-215ENST00000566843 DHRS1Q96LJ7 313 aa15.21■□□□□ 0.03
COMMD4-215ENST00000566843 Q96MT0 163 aa15.21■□□□□ 0.03
COMMD4-215ENST00000566843 UROC1Q96N76 676 aa15.21■□□□□ 0.03
COMMD4-215ENST00000566843 ARPC5LQ9BPX5 153 aa15.21■□□□□ 0.03
COMMD4-215ENST00000566843 ARHGAP39Q9C0H5 1083 aa15.21■□□□□ 0.03
COMMD4-215ENST00000566843 OLA1Q9NTK5 396 aaKnown RBP15.21■□□□□ 0.03
COMMD4-215ENST00000566843 ABI2Q9NYB9 513 aaPredicted RBP15.21■□□□□ 0.03
COMMD4-215ENST00000566843 WWOXQ9NZC7 414 aa15.21■□□□□ 0.03
COMMD4-215ENST00000566843 MARCH2Q9P0N8 246 aa15.21■□□□□ 0.03
COMMD4-215ENST00000566843 TSR3Q9UJK0 312 aaKnown RBP15.21■□□□□ 0.03
COMMD4-215ENST00000566843 PCDHB8Q9UN66 801 aa15.21■□□□□ 0.03
COMMD4-215ENST00000566843 PLXNA4Q9HCM2 1894 aa15.21■□□□□ 0.02
COMMD4-215ENST00000566843 DOCK3Q8IZD9 2030 aa15.21■□□□□ 0.02
COMMD4-215ENST00000566843 ANKRD66B4E2M5 251 aa15.2■□□□□ 0.02
COMMD4-215ENST00000566843 ZNF623O75123 536 aa15.2■□□□□ 0.02
COMMD4-215ENST00000566843 UGT2B17O75795 530 aa15.2■□□□□ 0.02
COMMD4-215ENST00000566843 SEMA3DO95025 777 aa15.2■□□□□ 0.02
COMMD4-215ENST00000566843 GPX2P18283 190 aa15.2■□□□□ 0.02
COMMD4-215ENST00000566843 RPS3P23396 243 aaKnown RBP eCLIP15.2■□□□□ 0.029e-8■■■■□ 25.4
COMMD4-215ENST00000566843 PRPH2P23942 346 aa15.2■□□□□ 0.02
COMMD4-215ENST00000566843 SLC15A1P46059 708 aa15.2■□□□□ 0.02
COMMD4-215ENST00000566843 RGS4P49798 205 aa15.2■□□□□ 0.02
COMMD4-215ENST00000566843 ARPC4P59998 168 aa15.2■□□□□ 0.02
COMMD4-215ENST00000566843 RING1Q06587 406 aa15.2■□□□□ 0.02
COMMD4-215ENST00000566843 ABRQ12979 859 aa15.2■□□□□ 0.02
COMMD4-215ENST00000566843 CCL14Q16627 93 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms