RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 NAF1Q96HR8 494 aaKnown RBP25.08■■□□□ 1.61
NME3-209ENST00000566600 CNOT10Q9H9A5 744 aaKnown RBP25.08■■□□□ 1.61
NME3-209ENST00000566600 AP1M2Q9Y6Q5 423 aa25.08■■□□□ 1.61
NME3-209ENST00000566600 DMXL2Q8TDJ6 3036 aa25.07■■□□□ 1.6
NME3-209ENST00000566600 URB1O60287 2271 aaKnown RBP25.07■■□□□ 1.6
NME3-209ENST00000566600 SDK2Q58EX2 2172 aa25.07■■□□□ 1.6
NME3-209ENST00000566600 NCF1BA6NI72 391 aaPredicted RBP25.07■■□□□ 1.6
NME3-209ENST00000566600 NCF1CA8MVU1 366 aaPredicted RBP25.07■■□□□ 1.6
NME3-209ENST00000566600 RAD1O60671 282 aa25.07■■□□□ 1.6
NME3-209ENST00000566600 SRPX2O60687 465 aaPredicted RBP25.07■■□□□ 1.6
NME3-209ENST00000566600 CPNE3O75131 537 aaKnown RBP25.07■■□□□ 1.6
NME3-209ENST00000566600 SHBGP04278 402 aa25.07■■□□□ 1.6
NME3-209ENST00000566600 HBQ1P09105 142 aa25.07■■□□□ 1.6
NME3-209ENST00000566600 NCF1P14598 390 aaPredicted RBP25.07■■□□□ 1.6
NME3-209ENST00000566600 EZRP15311 586 aaKnown RBP25.07■■□□□ 1.6
NME3-209ENST00000566600 NPPBP16860 134 aa25.07■■□□□ 1.6
NME3-209ENST00000566600 GMPRP36959 345 aa25.07■■□□□ 1.6
NME3-209ENST00000566600 YBX1P67809 324 aaKnown RBP25.07■■□□□ 1.6
NME3-209ENST00000566600 CLN3Q13286 438 aa25.07■■□□□ 1.6
NME3-209ENST00000566600 ZXDCQ2QGD7 858 aaPredicted RBP25.07■■□□□ 1.6
NME3-209ENST00000566600 TSNAXIP1Q2TAA8 658 aa25.07■■□□□ 1.6
NME3-209ENST00000566600 PTCHD3Q3KNS1 767 aa25.07■■□□□ 1.6
NME3-209ENST00000566600 TCTE1Q5JU00 501 aa25.07■■□□□ 1.6
NME3-209ENST00000566600 TLDC1Q6P9B6 456 aa25.07■■□□□ 1.6
NME3-209ENST00000566600 C6orf15Q6UXA7 325 aaPredicted RBP25.07■■□□□ 1.6
NME3-209ENST00000566600 RNF44Q7L0R7 432 aa25.07■■□□□ 1.6
NME3-209ENST00000566600 PAQR7Q86WK9 346 aa25.07■■□□□ 1.6
NME3-209ENST00000566600 TDRPQ86YL5 185 aa25.07■■□□□ 1.6
NME3-209ENST00000566600 PDPRQ8NCN5 879 aa25.07■■□□□ 1.6
NME3-209ENST00000566600 ZFYVE21Q9BQ24 234 aa25.07■■□□□ 1.6
NME3-209ENST00000566600 IRAK4Q9NWZ3 460 aa25.07■■□□□ 1.6
NME3-209ENST00000566600 NUDT4Q9NZJ9 180 aa25.07■■□□□ 1.6
NME3-209ENST00000566600 AHCTF1Q8WYP5 2266 aa25.07■■□□□ 1.6
NME3-209ENST00000566600 IGKV1-8A0A0C4DH67 115 aa25.06■■□□□ 1.6
NME3-209ENST00000566600 SRRM3A6NNA2 597 aaPredicted RBP25.06■■□□□ 1.6
NME3-209ENST00000566600 KLK10O43240 276 aa25.06■■□□□ 1.6
NME3-209ENST00000566600 CTSVO60911 334 aa25.06■■□□□ 1.6
NME3-209ENST00000566600 TIAF1O95411 115 aa25.06■■□□□ 1.6
NME3-209ENST00000566600 NUDT17P0C025 328 aa25.06■■□□□ 1.6
NME3-209ENST00000566600 ZNF28P17035 718 aa25.06■■□□□ 1.6
NME3-209ENST00000566600 GGT5P36269 586 aa25.06■■□□□ 1.6
NME3-209ENST00000566600 RASA2Q15283 850 aa25.06■■□□□ 1.6
NME3-209ENST00000566600 BROXQ5VW32 411 aa25.06■■□□□ 1.6
NME3-209ENST00000566600 ADCK2Q7Z695 626 aa25.06■■□□□ 1.6
NME3-209ENST00000566600 THOC6Q86W42 341 aaKnown RBP25.06■■□□□ 1.6
NME3-209ENST00000566600 KLHDC8AQ8IYD2 350 aa25.06■■□□□ 1.6
NME3-209ENST00000566600 CACNA2D3Q8IZS8 1091 aa25.06■■□□□ 1.6
NME3-209ENST00000566600 ATOH8Q96SQ7 321 aa25.06■■□□□ 1.6
NME3-209ENST00000566600 SELENOSQ9BQE4 189 aa25.06■■□□□ 1.6
NME3-209ENST00000566600 SLC7A5P2Q9GIP4 190 aa25.06■■□□□ 1.6
NME3-209ENST00000566600 WWOXQ9NZC7 414 aa25.06■■□□□ 1.6
NME3-209ENST00000566600 DYRK1BQ9Y463 629 aa25.06■■□□□ 1.6
NME3-209ENST00000566600 HCRTR1O43613 425 aa25.05■■□□□ 1.6
NME3-209ENST00000566600 RFPL1O75677 317 aa25.05■■□□□ 1.6
NME3-209ENST00000566600 RBP1P09455 135 aa25.05■■□□□ 1.6
NME3-209ENST00000566600 CCNYL3P0C7X3 344 aa25.05■■□□□ 1.6
NME3-209ENST00000566600 SLC6A12P48065 614 aa25.05■■□□□ 1.6
NME3-209ENST00000566600 GLRBP48167 497 aa25.05■■□□□ 1.6
NME3-209ENST00000566600 LCA5Q86VQ0 697 aa25.05■■□□□ 1.6
NME3-209ENST00000566600 SPACA3Q8IXA5 215 aa25.05■■□□□ 1.6
NME3-209ENST00000566600 MREGQ8N565 214 aa25.05■■□□□ 1.6
NME3-209ENST00000566600 IL22RA1Q8N6P7 574 aa25.05■■□□□ 1.6
NME3-209ENST00000566600 ACMSDQ8TDX5 336 aa25.05■■□□□ 1.6
NME3-209ENST00000566600 EXT2Q93063 718 aa25.05■■□□□ 1.6
NME3-209ENST00000566600 NKD1Q969G9 470 aa25.05■■□□□ 1.6
NME3-209ENST00000566600 GPR78Q96P69 363 aa25.05■■□□□ 1.6
NME3-209ENST00000566600 ACTR5Q9H9F9 607 aaPredicted RBP25.05■■□□□ 1.6
NME3-209ENST00000566600 CUEDC1Q9NWM3 386 aaPredicted RBP25.05■■□□□ 1.6
NME3-209ENST00000566600 TBK1Q9UHD2 729 aa25.05■■□□□ 1.6
NME3-209ENST00000566600 KCNE2Q9Y6J6 123 aa25.05■■□□□ 1.6
NME3-209ENST00000566600 A0A0J9YVX5 310 aa25.04■■□□□ 1.6
NME3-209ENST00000566600 SUPT3HB4E1H0 165 aa25.04■■□□□ 1.6
NME3-209ENST00000566600 H7BY64 318 aa25.04■■□□□ 1.6
NME3-209ENST00000566600 ZSCAN9O15535 394 aaPredicted RBP25.04■■□□□ 1.6
NME3-209ENST00000566600 CDH16O75309 829 aa25.04■■□□□ 1.6
NME3-209ENST00000566600 SUPT3HO75486 399 aa25.04■■□□□ 1.6
NME3-209ENST00000566600 NTRK1P04629 796 aa25.04■■□□□ 1.6
NME3-209ENST00000566600 GRK3P35626 688 aa25.04■■□□□ 1.6
NME3-209ENST00000566600 KCNC1P48547 511 aa25.04■■□□□ 1.6
NME3-209ENST00000566600 FBXO42Q6P3S6 717 aa25.04■■□□□ 1.6
NME3-209ENST00000566600 TIPARPQ7Z3E1 657 aaKnown RBP25.04■■□□□ 1.6
NME3-209ENST00000566600 GALNT6Q8NCL4 622 aa25.04■■□□□ 1.6
NME3-209ENST00000566600 CLIP3Q96DZ5 547 aa25.04■■□□□ 1.6
NME3-209ENST00000566600 LRFN5Q96NI6 719 aa25.04■■□□□ 1.6
NME3-209ENST00000566600 ZNF285Q96NJ3 590 aa25.04■■□□□ 1.6
NME3-209ENST00000566600 PRAP1Q96NZ9 151 aa25.04■■□□□ 1.6
NME3-209ENST00000566600 OR4K3Q96R72 315 aa25.04■■□□□ 1.6
NME3-209ENST00000566600 SPRTNQ9H040 489 aaPredicted RBP25.04■■□□□ 1.6
NME3-209ENST00000566600 ENAMQ9NRM1 1142 aa25.04■■□□□ 1.6
NME3-209ENST00000566600 PTBP2Q9UKA9 531 aaKnown RBP25.04■■□□□ 1.6
NME3-209ENST00000566600 SRPK3Q9UPE1 567 aa25.04■■□□□ 1.6
NME3-209ENST00000566600 SLC22A14Q9Y267 594 aa25.04■■□□□ 1.6
NME3-209ENST00000566600 H3BMH7 237 aa25.03■■□□□ 1.6
NME3-209ENST00000566600 ZNF749O43361 778 aa25.03■■□□□ 1.6
NME3-209ENST00000566600 WDR47O94967 919 aa25.03■■□□□ 1.6
NME3-209ENST00000566600 CCR8P51685 355 aa25.03■■□□□ 1.6
NME3-209ENST00000566600 UCNP55089 124 aa25.03■■□□□ 1.6
NME3-209ENST00000566600 IFFO1Q0D2I5 559 aa25.03■■□□□ 1.6
NME3-209ENST00000566600 ABHD18Q0P651 414 aa25.03■■□□□ 1.6
NME3-209ENST00000566600 TGIF1Q15583 401 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms