RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 ALBP02768 609 aa13.99□□□□□ -0.17
FANCA-220ENST00000566409 EIF2S1P05198 315 aaKnown RBP13.99□□□□□ -0.17
FANCA-220ENST00000566409 IMPA1P29218 277 aa13.99□□□□□ -0.17
FANCA-220ENST00000566409 RPA3P35244 121 aaPredicted RBP13.99□□□□□ -0.17
FANCA-220ENST00000566409 HSD17B2P37059 387 aa13.99□□□□□ -0.17
FANCA-220ENST00000566409 ELK3P41970 407 aa13.99□□□□□ -0.17
FANCA-220ENST00000566409 CARSP49589 748 aaKnown RBP13.99□□□□□ -0.17
FANCA-220ENST00000566409 RRADP55042 308 aa13.99□□□□□ -0.17
FANCA-220ENST00000566409 ARF3P61204 181 aaPredicted RBP13.99□□□□□ -0.17
FANCA-220ENST00000566409 DR1Q01658 176 aa13.99□□□□□ -0.17
FANCA-220ENST00000566409 TSTA3Q13630 321 aaPredicted RBP13.99□□□□□ -0.17
FANCA-220ENST00000566409 MORF4L2Q15014 288 aa13.99□□□□□ -0.17
FANCA-220ENST00000566409 PRTGQ2VWP7 1150 aa13.99□□□□□ -0.17
FANCA-220ENST00000566409 FAM214AQ32MH5 1076 aa13.99□□□□□ -0.17
FANCA-220ENST00000566409 DCAF10Q5QP82 559 aa13.99□□□□□ -0.17
FANCA-220ENST00000566409 HIBCHQ6NVY1 386 aaPredicted RBP13.99□□□□□ -0.17
FANCA-220ENST00000566409 TRMT10BQ6PF06 316 aaKnown RBP13.99□□□□□ -0.17
FANCA-220ENST00000566409 PAQR3Q6TCH7 311 aa13.99□□□□□ -0.17
FANCA-220ENST00000566409 SHISA6Q6ZSJ9 500 aa13.99□□□□□ -0.17
FANCA-220ENST00000566409 TTC29Q8NA56 475 aaPredicted RBP13.99□□□□□ -0.17
FANCA-220ENST00000566409 IP6K3Q96PC2 410 aa13.99□□□□□ -0.17
FANCA-220ENST00000566409 SMAD5Q99717 465 aaKnown RBP13.99□□□□□ -0.17
FANCA-220ENST00000566409 NAPGQ99747 312 aaPredicted RBP13.99□□□□□ -0.17
FANCA-220ENST00000566409 ZFYVE21Q9BQ24 234 aa13.99□□□□□ -0.17
FANCA-220ENST00000566409 MESP1Q9BRJ9 268 aa13.99□□□□□ -0.17
FANCA-220ENST00000566409 NAT9Q9BTE0 207 aa13.99□□□□□ -0.17
FANCA-220ENST00000566409 WDR54Q9H977 334 aa13.99□□□□□ -0.17
FANCA-220ENST00000566409 MRPS30Q9NP92 439 aaKnown RBP13.99□□□□□ -0.17
FANCA-220ENST00000566409 SAR1BQ9Y6B6 198 aa13.99□□□□□ -0.17
FANCA-220ENST00000566409 TEX264Q9Y6I9 313 aa13.99□□□□□ -0.17
FANCA-220ENST00000566409 MAU2Q9Y6X3 613 aa13.99□□□□□ -0.17
FANCA-220ENST00000566409 VSTM2BA6NLU5 285 aa13.98□□□□□ -0.17
FANCA-220ENST00000566409 SMAPO00193 183 aa13.98□□□□□ -0.17
FANCA-220ENST00000566409 EIF3FO00303 357 aaPredicted RBP13.98□□□□□ -0.17
FANCA-220ENST00000566409 SOCS6O14544 535 aa13.98□□□□□ -0.17
FANCA-220ENST00000566409 ZBTB14O43829 449 aa13.98□□□□□ -0.17
FANCA-220ENST00000566409 SORBS2O94875 1100 aaKnown RBP13.98□□□□□ -0.17
FANCA-220ENST00000566409 MMP11P24347 488 aa13.98□□□□□ -0.17
FANCA-220ENST00000566409 CD97P48960 835 aa13.98□□□□□ -0.17
FANCA-220ENST00000566409 ITGA8P53708 1063 aa13.98□□□□□ -0.17
FANCA-220ENST00000566409 SNRPNP63162 240 aaKnown RBP13.98□□□□□ -0.17
FANCA-220ENST00000566409 ZXDCQ2QGD7 858 aaPredicted RBP13.98□□□□□ -0.17
FANCA-220ENST00000566409 HKDC1Q2TB90 917 aa13.98□□□□□ -0.17
FANCA-220ENST00000566409 TEDDM1Q5T9Z0 273 aa13.98□□□□□ -0.17
FANCA-220ENST00000566409 SYDE1Q6ZW31 735 aaPredicted RBP13.98□□□□□ -0.17
FANCA-220ENST00000566409 UBE2R2Q712K3 238 aaPredicted RBP13.98□□□□□ -0.17
FANCA-220ENST00000566409 ARHGEF39Q8N4T4 335 aa13.98□□□□□ -0.17
FANCA-220ENST00000566409 RBMXL3Q8N7X1 1067 aaKnown RBP13.98□□□□□ -0.17
FANCA-220ENST00000566409 Q8NA96 180 aa13.98□□□□□ -0.17
FANCA-220ENST00000566409 CERS2Q96G23 380 aa13.98□□□□□ -0.17
FANCA-220ENST00000566409 OR2A5Q96R48 311 aa13.98□□□□□ -0.17
FANCA-220ENST00000566409 ABCF3Q9NUQ8 709 aa13.98□□□□□ -0.17
FANCA-220ENST00000566409 CUEDC1Q9NWM3 386 aaPredicted RBP13.98□□□□□ -0.17
FANCA-220ENST00000566409 GPR83Q9NYM4 423 aa13.98□□□□□ -0.17
FANCA-220ENST00000566409 ANKMY1Q9P2S6 941 aa13.98□□□□□ -0.17
FANCA-220ENST00000566409 TRMT6Q9UJA5 497 aaKnown RBP13.98□□□□□ -0.17
FANCA-220ENST00000566409 CHMP2BQ9UQN3 213 aa13.98□□□□□ -0.17
FANCA-220ENST00000566409 PDE10AQ9Y233 779 aa13.98□□□□□ -0.17
FANCA-220ENST00000566409 ZNF451Q9Y4E5 1061 aa13.98□□□□□ -0.17
FANCA-220ENST00000566409 PCDHGB7Q9Y5F8 929 aa13.98□□□□□ -0.17
FANCA-220ENST00000566409 SCN3AQ9NY46 2000 aa13.98□□□□□ -0.17
FANCA-220ENST00000566409 NAV2Q8IVL1 2488 aa13.98□□□□□ -0.17
FANCA-220ENST00000566409 AGPSO00116 658 aa13.97□□□□□ -0.17
FANCA-220ENST00000566409 PEX12O00623 359 aa13.97□□□□□ -0.17
FANCA-220ENST00000566409 ALOX12BO75342 701 aa13.97□□□□□ -0.17
FANCA-220ENST00000566409 SEC31AO94979 1220 aaKnown RBP13.97□□□□□ -0.17
FANCA-220ENST00000566409 TSPAN12O95859 305 aa13.97□□□□□ -0.17
FANCA-220ENST00000566409 PIM1P11309 404 aaPredicted RBP13.97□□□□□ -0.17
FANCA-220ENST00000566409 SOX8P57073 446 aa13.97□□□□□ -0.17
FANCA-220ENST00000566409 MRPS25P82663 173 aaKnown RBP13.97□□□□□ -0.17
FANCA-220ENST00000566409 SRSF1Q07955 248 aaKnown RBP eCLIP13.97□□□□□ -0.172e-13■■■■□ 22.3
FANCA-220ENST00000566409 STEAP4Q687X5 459 aa13.97□□□□□ -0.17
FANCA-220ENST00000566409 JMJD6Q6NYC1 403 aaPredicted RBP13.97□□□□□ -0.17
FANCA-220ENST00000566409 KIRREL2Q6UWL6 708 aa13.97□□□□□ -0.17
FANCA-220ENST00000566409 MBOAT1Q6ZNC8 495 aa13.97□□□□□ -0.17
FANCA-220ENST00000566409 KIAA0408Q6ZU52 694 aa13.97□□□□□ -0.17
FANCA-220ENST00000566409 GALNT7Q86SF2 657 aa13.97□□□□□ -0.17
FANCA-220ENST00000566409 PLD3Q8IV08 490 aa13.97□□□□□ -0.17
FANCA-220ENST00000566409 PDIK1LQ8N165 341 aa13.97□□□□□ -0.17
FANCA-220ENST00000566409 GALNT16Q8N428 558 aa13.97□□□□□ -0.17
FANCA-220ENST00000566409 CFAP36Q96G28 342 aa13.97□□□□□ -0.17
FANCA-220ENST00000566409 FER1L6-AS2Q96M78 137 aa13.97□□□□□ -0.17
FANCA-220ENST00000566409 MFRPQ9BY79 579 aa13.97□□□□□ -0.17
FANCA-220ENST00000566409 SOX17Q9H6I2 414 aaPredicted RBP13.97□□□□□ -0.17
FANCA-220ENST00000566409 ZNF552Q9H707 407 aaPredicted RBP13.97□□□□□ -0.17
FANCA-220ENST00000566409 ZNF304Q9HCX3 659 aa13.97□□□□□ -0.17
FANCA-220ENST00000566409 SH2B3Q9UQQ2 575 aa13.97□□□□□ -0.17
FANCA-220ENST00000566409 RUVBL1Q9Y265 456 aaKnown RBP13.97□□□□□ -0.17
FANCA-220ENST00000566409 HS3ST3B1Q9Y662 390 aa13.97□□□□□ -0.17
FANCA-220ENST00000566409 HIVEP3Q5T1R4 2406 aa13.97□□□□□ -0.17
FANCA-220ENST00000566409 SPTBN1Q01082 2364 aaKnown RBP13.96□□□□□ -0.17
FANCA-220ENST00000566409 ESPL1Q14674 2120 aa13.96□□□□□ -0.17
FANCA-220ENST00000566409 CLEC18AA5D8T8 446 aa13.96□□□□□ -0.17
FANCA-220ENST00000566409 ZNF839A8K0R7 811 aa13.96□□□□□ -0.17
FANCA-220ENST00000566409 H7BY64 318 aa13.96□□□□□ -0.17
FANCA-220ENST00000566409 HAT1O14929 419 aa13.96□□□□□ -0.17
FANCA-220ENST00000566409 P2RX6O15547 441 aa13.96□□□□□ -0.17
FANCA-220ENST00000566409 RPL21P46778 160 aaKnown RBP13.96□□□□□ -0.17
FANCA-220ENST00000566409 RELAQ04206 551 aa13.96□□□□□ -0.17
FANCA-220ENST00000566409 MYBPC3Q14896 1274 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms