RNA–Protein interactions for RNA: ENST00000566400.5

BBS4-210, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 2,055 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-210ENST00000566400 NODALQ96S42 347 aa9.04□□□□□ -0.96
BBS4-210ENST00000566400 MBOAT4Q96T53 435 aa9.04□□□□□ -0.96
BBS4-210ENST00000566400 P2RY13Q9BPV8 354 aa9.04□□□□□ -0.96
BBS4-210ENST00000566400 ZCCHC2Q9C0B9 1178 aaKnown RBP9.04□□□□□ -0.96
BBS4-210ENST00000566400 SPATA6Q9NWH7 488 aaPredicted RBP9.04□□□□□ -0.96
BBS4-210ENST00000566400 ADPRHL2Q9NX46 363 aa9.04□□□□□ -0.96
BBS4-210ENST00000566400 ZNF282Q9UDV7 671 aaPredicted RBP9.04□□□□□ -0.96
BBS4-210ENST00000566400 TBX21Q9UL17 535 aa9.04□□□□□ -0.96
BBS4-210ENST00000566400 NAALAD2Q9Y3Q0 740 aa9.04□□□□□ -0.96
BBS4-210ENST00000566400 UPK3BL1B0FP48 263 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 UPK3BL2E5RIL1 263 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 AREL1O15033 823 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 ATE1O95260 518 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 SHMT2P34897 504 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 CA8P35219 290 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 ISL1P61371 349 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 PHC1P78364 1004 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 PHEXP78562 749 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 NFATC3Q12968 1075 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 ERAP2Q6P179 960 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 CBLL1Q75N03 491 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 THOC6Q86W42 341 aaKnown RBP9.03□□□□□ -0.96
BBS4-210ENST00000566400 PHACTR4Q8IZ21 702 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 KIAA1958Q8N8K9 716 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 KREMEN2Q8NCW0 462 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 CLHC1Q8NHS4 586 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 BTN2A2Q8WVV5 523 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 IRF7Q92985 503 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 YME1L1Q96TA2 773 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 BBS2Q9BXC9 721 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 SLC46A2Q9BY10 475 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 REXO4Q9GZR2 422 aaKnown RBP9.03□□□□□ -0.96
BBS4-210ENST00000566400 RAD21L1Q9H4I0 556 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 EPS8L2Q9H6S3 715 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 SMURF2Q9HAU4 748 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 TMEM39AQ9NV64 488 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 ATAD3AQ9NVI7 634 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 SIRT5Q9NXA8 310 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 CLEC4EQ9ULY5 219 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 PCDHB11Q9Y5F2 797 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 KCNE2Q9Y6J6 123 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 A0A0J9YVX5 310 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 SLC1A7O00341 560 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 CBFA2T3O75081 653 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 JRKO75564 520 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 FGF18O76093 207 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 ZNF682O95780 498 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 DDX5P17844 614 aaKnown RBP9.03□□□□□ -0.96
BBS4-210ENST00000566400 RPL10P27635 214 aaKnown RBP9.03□□□□□ -0.96
BBS4-210ENST00000566400 KDELR2P33947 212 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 CTSOP43234 321 aaPredicted RBP9.03□□□□□ -0.96
BBS4-210ENST00000566400 PRLHRP49683 370 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 ATN1P54259 1190 aaPredicted RBP9.03□□□□□ -0.96
BBS4-210ENST00000566400 EPHA5P54756 1037 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 CD47Q08722 323 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 E2F2Q14209 437 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 NKG7Q16617 165 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 AAK1Q2M2I8 961 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 TRIM60Q495X7 471 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 GTDC1Q4AE62 458 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 PAGE2BQ5JRK9 111 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 HENMT1Q5T8I9 393 aaKnown RBP9.03□□□□□ -0.96
BBS4-210ENST00000566400 XAF1Q6GPH4 301 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 OR4F3Q6IEY1 312 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 CAPN13Q6MZZ7 669 aaPredicted RBP9.03□□□□□ -0.96
BBS4-210ENST00000566400 DPPA4Q7L190 304 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 KIAA0907Q7Z7F0 614 aaPredicted RBP9.03□□□□□ -0.96
BBS4-210ENST00000566400 ZC3H7AQ8IWR0 971 aaKnown RBP9.03□□□□□ -0.96
BBS4-210ENST00000566400 HS6ST3Q8IZP7 471 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 FAM86B1Q8N7N1 296 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 OR2A12Q8NGT7 310 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 ZNF296Q8WUU4 475 aaPredicted RBP9.03□□□□□ -0.96
BBS4-210ENST00000566400 IPCEF1Q8WWN9 437 aaPredicted RBP9.03□□□□□ -0.96
BBS4-210ENST00000566400 AUTS2Q8WXX7 1259 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 CORO1BQ9BR76 489 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 CCM2Q9BSQ5 444 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 DCUN1D5Q9BTE7 237 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 DUSP26Q9BV47 211 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 AMBRA1Q9C0C7 1298 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 REEP1Q9H902 201 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 LIN28AQ9H9Z2 209 aaKnown RBP9.03□□□□□ -0.96
BBS4-210ENST00000566400 CARS2Q9HA77 564 aaKnown RBP9.03□□□□□ -0.96
BBS4-210ENST00000566400 SPHK2Q9NRA0 654 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 GALNT8Q9NY28 637 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 MARK1Q9P0L2 795 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 PPT2Q9UMR5 302 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 VPS4AQ9UN37 437 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 B3GNT3Q9Y2A9 372 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 TRIM17Q9Y577 477 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 SCN5AQ14524 2016 aa9.03□□□□□ -0.96
BBS4-210ENST00000566400 NEDD8-MDP1E9PL57 170 aa9.02□□□□□ -0.97
BBS4-210ENST00000566400 SCAMP2O15127 329 aaKnown RBP9.02□□□□□ -0.97
BBS4-210ENST00000566400 SGTAO43765 313 aa9.02□□□□□ -0.97
BBS4-210ENST00000566400 NOBOXO60393 691 aa9.02□□□□□ -0.97
BBS4-210ENST00000566400 KCNK5O95279 499 aa9.02□□□□□ -0.97
BBS4-210ENST00000566400 ANGPTL1O95841 491 aa9.02□□□□□ -0.97
BBS4-210ENST00000566400 JUNDP17535 347 aa9.02□□□□□ -0.97
BBS4-210ENST00000566400 PTPN2P17706 415 aa9.02□□□□□ -0.97
BBS4-210ENST00000566400 ENGP17813 658 aa9.02□□□□□ -0.97
BBS4-210ENST00000566400 SERPINB10P48595 397 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 254.2 ms